Tachysurus fulvidraco (yellow catfish): 113659247
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Entry
113659247 CDS
T08119
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113659247 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tfd04091
]
113659247 (frem2a)
Lectins [BR:
tfd04091
]
C-Type lectins
Lecticans
113659247 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
DUF6522
Motif
Other DBs
NCBI-GeneID:
113659247
NCBI-ProteinID:
XP_047661185
LinkDB
All DBs
Position
20:complement(8670487..8727335)
Genome browser
AA seq
3101 aa
AA seq
DB search
MLELFLWFIVMPSVAGSYGRHGLSYAHRAALSEDSILVANNRIRVPFGRSVFIDPINDLV
IEVQPGDKCSLIVLDNDPLSQRPGHLSPKRFPCEFGPNDVKYSHLGSRSPAEDRVRLQLR
YDTQTDTVIIPFMLEIQVLFTQLEIVTKNMPLTVDKLHGISNSIDRRILEFTYDRNSEQC
EVTSLAASSALPRYGELADNSKKLEQMMDCDAFLLADIRYKHTSIHESPNRDYVPMVVEL
RNKENNLLTQEFFRIMIRIREGLQNSPPKPSFVAMMMMEIDQFVMTALTSDMLAAEDTES
DPDDLIFNITTPFSFEEGYIVSTDDRNLPITSFYQRDIKDLKIAYKPPSTDSDTERIFQI
EFEVLDTDGGVSEPFAFMIVIKPMNTLAPVVTKNSGQLLYEGQSRPLFTQNNLEISDEDN
LDSVRITVVNGLRHGDLTILGSSTNYFTPADLQVGIVVYQHDGSDTYSDNIIFRMTDGKN
EVEFLFPITIVPTDDEPPIINANTGLVVFKNQMIPISPLMLSAADIDSEDSTIKFTIEPP
LSTIGEVLLRQSEAPKDPSSWKFNTEDGLYEKTVTEWLQKDITDGKLFYKHTGPHITETV
TDRFIFKAQDDADPPNQSDENTFFIRILPIDDVPPVLFPGTSLQMTVHEYQMTSFNKNVL
HYTDLDSDDRDLKYTVTQPPTDTDEGHPVRFGSVVLTEHRGTEVREFTQAQVNHHKISYS
PPDIELGITAHVAQFHFIVEDTAGNSVKGVFTILVQPVNNKPPEITNTGFTVFERGMHIL
TSAELDVTDLDTESKQISFTLSQSPQHGQVQLSFTDLIKGNTFRLSDISEGRISYVHNGD
EATNDAFKLEVSDGVHIVPISVRIVVKPIDDEMPTLTLSEGTLGSHLSVLENGATEITSS
VIQGKDEDTDDLRLTFIVEDAPAYGEILVNGIPSNMFTQADIINGLVTYSHTSGEIGLSS
KQDNFNLTLNDMSDEWAFGGNKITGVSVHVTILPVNNQAPVVTVVPMFNVTEGDKNVIGG
HHIIVQDTDTLTEEILCTIVVQPNSGYIENISPAPGSEKSRSGTAISAFSIRDISDGHIR
YVQSIHKGVEPVEDRFTFRCSDGVNFSGRLVFPIVIIPTNDEKPEIFLREFVVMEGMNII
IDMPILNGVDADIPVESLTFIISQPPKHGFILDQLITGSLPVTNFTLEQIKEASSIIYEH
DDSESTEDKFNVILTDGKHNVESTVMIIIIAVDDETPRLAINDGLEIEIGETKEINNKIL
KATDLDSEDRTLTFIIRHGPSQGTLQRKTEHGSMKNITVGMNFTQMELDLSLVFYTHNGQ
EGIRDLIKFDVTDGSNPLIDRYFYITVSNIDRVFPEVISKGVSLKEGGSVLLTTDILSTS
DLNSPDENLVFTITRAPVRGHLESTDTPGMPIVSFTQLQLAGSKIYYIHTSDDEIKMDSF
EFEVTDGYNPVFRTFRVSIVDVDNKKPVLTVRELQVLEDQSKLITPFELTVEDQDTAEEF
LKFTVTQLPIHGKLLFNNSRAISSFTKQDLNENLISYKHDGTESYQDSFSFTVTDGTHSD
FYVFPDTVFETHRPQVMKIIISSIDNGIPQIVVNKGVQTLKVLPTGHLGYPITRKVLKAE
DRDSSPETLVFHITTQPEHGYLINLQKGNESIKRFTQANIDELNICYVLKHKDNATSDSF
IFYVEDNGGNKLKEQHFRLDWCWISLQKQSYVVDEQVGVMEVVLRRRGYLGETSFVGIGT
LDGSAEKEKDFRGNFQKQVQFNPGQSTATWRLKILTDGMYEQSETFSIILSEPVMAALES
PAVATVEIVDPEDESTVFIPQARLVVEEDTGELLVPLHRRGDVSEELMVLCYTLQDSATG
TVPSTVLSFSDYITRTEGQSSILRFEKGETEKLCRVVIIDDSLYEPEESFNVSLSVVLGG
RLGSDYPSTRISILPDLNDAPVFYFSDTEYHVDESQGHVDVTVWRTGTDLSKPATITVRS
RKTDPVSAEAGVDYVGISKNLDFAPGVNMQTVRVTILDDLGQPLLEGTEKFELVLRLPSN
GILGEPAKATVLINDSISDLPKMQFKHPLLTGEESDRRLTAIVQRSGDITHRSTVRCYTR
QGSAQVASDFEERPNTDASIITFLPGDTEKPCVLTLVDDSIYEEEEEMRLVLGSATSDSL
YGASIGTKNETIIKIKDRADKPIIKFAETKLSVNEPKEFGKVSVVRISVLRLGDSSKVSV
VRVHTKDGSAVSGEDYHPISQDVEFNEGETEHFVEVEVLFDGAREMREAFTIHLKPDENM
VAEIQMAKAIVYIEETNSMADVTFPSLPHVMSLLHYDVRRTVHNAHPPAGYPVVCVTACN
NKHPEYEKTGSICASEHINDTLTRYRWLVSAPTGPDGVTSPMREVDIDTFFTSTKMITLD
SIYFQAGSRVQCAARAVNANGDEGLELSSPIVSISMEEGMCHPRKVGTVGAEPFSAKLHY
TGTEDPEHANLIKLSVTLPHTDGMLPVLSTRTLSNFELTLSPDGSRVGNHRCSNLLDVDE
VPTRHGFLTKATKSVEQMGESAPYQYNSTMRGLNTLRFYKNLNLEACLWEFVNYYDMSEL
LTDCGGNIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGSSGWQHFDLQSELRLTFVYDT
AILWKDGVGSPPQAELQGALYPASMRINDLGRLVVNFRTEAHFRGLFVALHYASSLTSMV
TSTAHPGLTFNLSLVRTEPTYNQPVQQWTFTSDFAVRDYSGTYTVKLIPCTTAINIEYSV
PAVCDPREPVTFDLDIRFQQVSDPVAVEFSLNTQMFLLSKRSVWLSDGSMGFGQESDTAF
SEGDIIYGRVMVDPVQNLGDSFHCNIEKVYLCTGADGYVPKYNPTKLEFGCLADSSSLLY
RFKIIDKAQPETQALHFGDMNFNAVLAVDDPSALSLVKQPGSDGFRLDSAPLFQVAAGRE
WYIHTIYTVRSRDNAKRGIGKRSVEYHSFTAHNTRAKRSNQDVPAIAEIISAEHNRGTNI
MHIALERQQALQAGEVPAEGLVQNEMARRGSEGEAVMAAGVSLGLVLFGLIAVVLFLMLQ
SQRRPEKEMRKRSKKEGLTVSGGIQPVTLRSGFEGSDGSEV
NT seq
9306 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactctttctgtggtttattgtcatgccctcagtggcaggtagttatggacgc
cacggactgtcttacgcgcacagagcagcgctctcagaggactcgatacttgtagcgaac
aacaggatacgtgttcccttcggcaggtctgtttttattgatcccattaatgatctggtg
attgaagtgcagcctggagacaagtgcagcttaatagtgttggataatgatccgctgtcc
caaagacctgggcatctttctcccaaaaggttcccgtgtgaattcggacctaatgatgtg
aaatactcgcatttgggctccaggagccctgctgaagatagagtcagactgcaactcagg
tacgacacccaaactgataccgtcatcataccgttcatgctggagatacaggtccttttc
acccagttggagatagttactaaaaatatgcctctcactgtagataaactccatggcatt
agcaattcaattgacagaagaatactggaatttacatatgatagaaactctgagcaatgt
gaggtcacatccttggctgctagcagtgcactgcctagatatggtgaactcgctgataac
agtaagaagttagagcaaatgatggactgtgatgcttttctcctagcagatattcgctac
aagcatacttctattcacgagtccccaaacagagactacgttccaatggttgtggagcta
agaaacaaagaaaataatttactgacgcaagagttttttcgtatcatgatacgtataaga
gaaggactgcaaaacagtcctcccaaacctagctttgtggctatgatgatgatggaaatc
gatcagtttgtcatgactgctttaacttctgacatgttagctgcagaggacacagaatct
gatcctgatgatcttatctttaacatcaccacccccttctcttttgaagaaggttatatt
gtgagtaccgatgatagaaatttaccaattacatctttttatcagcgagatataaaggat
ctgaagatagcatacaagcccccatctacagactcggacacagagagaatatttcagatt
gagtttgaagttttggacacagatggtggagtttctgaaccttttgcttttatgattgtg
attaagcccatgaacacacttgcaccagtggtgactaaaaactcagggcagttgctgtat
gagggtcagtccagacctctgttcactcagaacaatttagaaatcagtgatgaagataac
ctggatagtgtcagaataactgttgtaaatggtctccgtcatggtgatctcaccattctt
ggctccagcacaaattatttcacaccagctgatctgcaagttggtattgttgtctaccag
catgatggcagtgacacatacagtgataacatcattttcagaatgacagatggcaagaat
gaggtggagtttttgttcccgattacaattgttccaacggatgatgaaccccccattata
aatgccaatacgggattggtggtatttaaaaaccaaatgattcccatttcacctctaatg
cttagtgcagcagatattgactcggaagattccactattaagttcactattgaacctcca
ctctcaactattggggaagtactgctaaggcaatctgaggctccaaaagatccatcctca
tggaaattcaatacagaagatgggttatatgagaaaactgtgacagagtggctacagaaa
gacattacagatgggaaacttttctacaaacacacagggccccacatcactgaaacagtc
actgatcggtttatctttaaagctcaggatgatgctgatcctccgaatcaatcagatgag
aacacattcttcattaggattctccctatcgatgatgttccgcctgtactttttcctggc
acatctttacagatgacagtccatgagtatcaaatgactagttttaacaagaatgtcctt
cattacactgatttggattctgatgacagagatctgaaatacacagtaacccagccacca
actgacacagacgaaggtcatccagtcagatttggttcagtagttttaacagagcaccgt
ggcaccgaggtaagagaattcactcaagcacaagtgaatcatcataagatttcctacagt
ccgcccgacatcgagcttggcatcacagcccatgtcgcacagttccatttcatagttgaa
gacactgctggtaacagtgtaaaaggagttttcaccatattggtgcaacctgttaataac
aaacctccagagattactaacactggtttcacagtctttgagcgaggtatgcatatacta
acaagtgctgagcttgatgttactgaccttgatacagaaagtaaacagatttcctttact
ttaagtcagagtccacaacatggtcaggtccagcttagctttactgatttaattaaaggt
aatacttttagactatcagatatttcagagggcagaatttcttatgtccacaatggggat
gaggcgaccaacgatgcttttaaactagaggtcagtgatggtgtccatattgtaccaatt
tcagtaagaatagtagtgaaaccaattgatgatgaaatgccaactttgactctctcagaa
ggtactcttggctctcacctgtctgtgttggaaaatggtgctactgaaatcacatccagt
gtaatccaggggaaagacgaagacacagatgacctcaggttgacttttattgttgaggat
gcccctgcatatggggagatcctggtgaatggaataccttccaacatgttcacccaagct
gatataatcaacggtttggtgacatattcacatacaagtggtgagattgggctttcttca
aaacaggataattttaacttaaccctcaatgacatgtctgatgagtgggcttttggagga
aataaaatcactggagtatccgttcatgttactattctcccagttaataaccaggccccc
gtggtaacagtggttcctatgtttaacgtcacagagggagacaaaaacgtaattggaggc
caccacattattgttcaggacacagacacactcactgaagaaatcttgtgtactatcgtt
gtccagccaaattcaggttatatagagaacatctctccagcaccaggctctgagaagtcc
aggtctggcacagctattagtgcttttagtattagagatatcagtgatggccatatccgc
tatgtccaaagcatacataaaggagttgaaccagtagaggatagattcacattcagatgc
tctgatggtgttaacttctcaggaagacttgttttcccaattgtaattatcccaaccaat
gatgagaagccagaaatatttctgagagagtttgtagtgatggagggcatgaacatcatc
attgacatgcccatcctgaatggagttgatgctgatattccagttgaaagtttgactttt
atcatttcacaaccacccaaacatggttttattcttgaccagctgatcactggctctctc
ccagttactaactttaccttagagcaaatcaaggaagcttctagcattatttatgaacat
gatgattctgagagcacagaagacaaatttaatgttattctcacggatggaaaacataat
gtagaaagtactgttatgattataattattgctgttgatgatgagactccaagattggcc
attaatgatggtttggaaattgaaattggagagacaaaagaaataaataataagattctg
aaggcaactgatttagactctgaagataggacacttacatttataattcggcatggtcct
agtcagggaactctacagaggaaaacagaacacgggtctatgaagaacatcactgttggg
atgaattttacacagatggaactggacctgagtcttgttttctatacccacaatgggcag
gaaggtattcgtgaccttataaaatttgatgttacagatggtagtaatccactaattgac
agatatttctacatcactgtgagcaacatcgacagggtatttcctgaagttattagcaaa
ggagtatctctgaaagaaggaggaagtgtgctgcttaccactgatatactaagtacaagt
gatctcaacagcccagatgaaaacctggtcttcactatcaccagagctcctgtgagggga
catctagaaagcacggacactcctggaatgcccattgtgtctttcactcaacttcagctg
gctggaagtaaaatctactacatccacacttcagatgatgaaatcaagatggacagtttt
gagtttgaggtcactgacggatataaccctgttttccgcaccttccgtgtatcaatagtt
gacgttgacaacaaaaaacctgtgctgacagtacgtgagctccaggtattagaagatcag
tctaaacttatcacaccatttgagttgactgtagaggatcaagatacagcagaggaattt
ctgaagttcactgtcactcagttgcctatccatggtaaactgctcttcaacaacagccgt
gcaatttcctccttcacaaagcaagacctgaatgaaaacttaatcagttacaaacatgat
ggcacagagtcctatcaggacagcttttctttcactgtcactgatggaacacactctgat
ttctatgtatttcctgacacagtgtttgaaactcacaggcctcaagtgatgaaaatcatt
atttcctcgatagacaatggaataccacaaattgtggtgaacaaaggtgttcaaacgtta
aaagtcttgccaacgggccacctaggctatcctatcaccagaaaagtgctaaaggcagaa
gaccgagacagcagcccagagaccctggtttttcacatcaccacccaaccagagcatggc
tacctgatcaaccttcagaaagggaatgagtccattaaaagatttactcaagcgaacatt
gatgagctgaatatctgctacgtgttgaaacataaggacaatgccaccagtgacagcttt
atcttctatgttgaagacaatggagggaataagctgaaggagcagcacttccgtctggac
tggtgttggatctctctacagaaacagagctacgtggtggacgagcaggtcggagtcatg
gaggttgtgctcagacgcagaggatacctaggggaaacttcttttgttggcattggcact
ttggatggcagtgctgagaaggagaaggactttcggggaaattttcagaaacaggtgcag
tttaatccaggccagagcacagctacatggaggctcaagattcttactgatgggatgtat
gagcagtctgagaccttcagcatcattttgtctgagccagtcatggcagcactggagtca
ccagcagtagcaaccgtggaaatcgtggatcccgaagatgagtctacagtcttcattccc
caggcaagacttgttgtcgaggaggacaccggagagctgctcgtcccgttacacagaaga
ggagacgtcagtgaggagctgatggtgctctgctacacgctgcaagactcggctacaggg
acagtccccagcacggttctctctttctcggactacatcactcgaacagagggacagagc
agcattctgcgctttgaaaaaggagagacggagaaactttgccgtgtggtgatcatagac
gactccctttatgagcctgaggaaagctttaacgtctctctcagcgtggtgttaggcggc
cgcctcggctccgattaccccagcacacgcatcagcattctgccagacctaaacgatgct
cctgtgttctacttcagtgatacagagtaccacgtggacgagagccaaggtcacgttgac
gtgacagtgtggaggactggaacggacctctccaaaccggccaccatcactgtccgttcc
cgtaaaaccgatccagtgtcagctgaagctggagtggactacgtgggaatcagtaagaat
ttagactttgccccaggagtgaacatgcaaaccgttcgagtcacaattctggatgatctc
ggccagccgctgcttgagggcaccgagaaattcgagcttgttctgcgcttgccctcgaat
gggattctgggagagccagcaaaagccaccgtcttaatcaacgattccatctctgaccta
ccaaagatgcagtttaaacatcctcttctgactggagaagagagcgatagacgtctcact
gctattgtccagcgcagtggagatatcacacaccgatccactgtgcgttgttacacacgc
cagggatctgctcaggtggccagtgacttcgaagagagacccaacactgatgcgtcaatc
atcaccttcttaccaggtgatacggagaagccttgcgttttaacgttagtggacgactca
atatatgaagaagaggaagagatgaggcttgtgctcgggagtgctacaagtgactccctg
tatggagcatcaataggcacaaaaaatgaaaccatcatcaagattaaagaccgtgctgac
aagccgattatcaagtttgctgagacaaagttgagtgtgaatgagccaaaagagtttggg
aaggtgagcgttgtgcggatctctgtgctccgactgggtgattcctccaaagtgtccgtg
gtgagagtacacactaaagacggttcggctgtgtcaggagaagactatcaccccatctct
caggatgttgaatttaatgaaggtgaaacagaacattttgtggaggtggaggtcctgttt
gatggagccagagaaatgagagaagccttcaccatccacctcaaacctgatgaaaacatg
gtggctgagatccagatggccaaggccatagtgtacattgaagagaccaacagcatggct
gacgtcacattcccctcactgccacatgtcatgtctctgctgcactatgatgtcagaagg
accgtacacaatgcccacccaccagccggttatcctgtggtctgtgtgacggcatgcaac
aataagcacccagaatatgagaaaacgggctcgatttgtgcaagtgaacacatcaatgac
acgctaacacgctatcgctggcttgtcagtgcccccactgggccagacggtgtcaccagc
ccaatgagggaagtggatattgacacctttttcacctccacgaagatgatcacgctggac
tccatctacttccaagcgggctcacgggtccagtgcgccgctcgtgccgttaacgccaac
ggggatgaagggctggagctcagcagccccatcgtttccataagcatggaagagggaatg
tgtcaccctcgtaaagtgggaacagtaggtgctgagcctttctctgctaagctccactac
accggcaccgaggacccagaacatgccaacctcatcaagcttagtgtcacattgccccac
acagatggcatgctcccagtgctctcaactcgtactctttccaacttcgagctgaccctg
agtccagatggcagccgtgtaggcaaccaccggtgctccaacctgctggacgtggacgag
gttcccacacgccacggcttccttacaaaggccaccaagagcgtggaacaaatgggagag
agcgctccttaccaatacaactctaccatgagaggcctgaacacgctacgcttctacaag
aaccttaaccttgaggcctgtctgtgggagtttgtaaactattatgacatgtctgagctg
ctcacagactgcggtgggaacatcgggactgacgggcaggtgctaaatctggtgcagtcc
tatgtgactctgcgtgtccccctccatgtctcctatgtgtttcactcacctgtgggctcc
agtggctggcagcactttgacctacagtctgaactgaggcttacttttgtttacgacact
gccatcctgtggaaggacggcgtcggtagccctcctcaagctgaactgcaaggagctctt
tacccagccagtatgaggattaatgatctgggccgtctggtggtcaacttccgcacagag
gctcactttcgcgggctgtttgtggccttacactatgcatcttctttgacatcaatggtc
acgagtacagcccacccagggttaacctttaacctttccttggtcagaacggaacccacc
tacaaccagcccgtgcagcagtggacattcacatcagactttgctgtgcgtgattattct
ggtacctacacggtaaagctaatcccctgcaccacggccataaacatcgagtactctgtt
cctgcggtgtgtgaccccagagagccagtcacttttgacctggacatcaggttccagcag
gtaagcgatcctgtcgctgtggagttcagtctgaatacacagatgttcttgctgtcaaag
agatctgtgtggctctctgatggatctatgggctttggacaggagagtgatacagcgttc
tcagagggtgatatcatctacggccgagtgatggtggatccagtgcagaacctgggggat
tcatttcactgtaacattgagaaggtttatttgtgcactggagcagatggatatgtgccc
aagtacaaccccaccaagttagagtttggctgcttggcagattcttcttccctcctctac
agattcaaaataattgacaaagcacagccggagactcaggctctgcattttggtgatatg
aacttcaatgcagtgctggcagtagacgacccctcagccctctctctagtgaagcagcct
ggctcagatggattcagactggactctgctcccttattccaggtggcagcaggccgtgag
tggtacatccacaccatttacactgtgcgctccagagacaatgcgaagcgtggcatcggg
aaaagaagcgtggagtaccattccttcacagcacacaacactcgtgccaagcgctctaac
caggatgtgcctgctattgctgaaataatcagtgctgagcacaatcgaggcaccaacatc
atgcacatcgctttagagcgtcagcaggcactgcaggccggtgaggttcctgctgaaggc
ctggtacagaatgaaatggccagacgtggcagtgagggagaggcagtgatggcagcagga
gtctcacttgggctggtgctcttcggcctcatcgcagtcgtgctttttctaatgctgcaa
tcacagaggagaccagaaaaggagatgagaaagcgatcaaagaaggagggactaacagtc
tctggcggcatacagccagttactttgaggagtggttttgaaggcagcgatggctctgaa
gtctga
DBGET
integrated database retrieval system
