Tachysurus fulvidraco (yellow catfish): 113659298
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Entry
113659298 CDS
T08119
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113659298 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113659298 (aqr)
Spliceosome [BR:
tfd03041
]
Complex B
Other components
Prp19-related factors
113659298 (aqr)
Complex C
113659298 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD_C_2
DEAD
SLFN-g3_helicase
UvrD-helicase
AAA
AAA_16
PhoH
AAA_22
DnaB_C
RecA_N
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
113659298
NCBI-ProteinID:
XP_027027782
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All DBs
Position
12:complement(15726575..15763331)
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AA seq
1468 aa
AA seq
DB search
MEKDARVKKTAAPSVDQINAEYVTQLSNKFWAPHAKNKLPFDSKVVEDVYQNEILKSKFA
IRKIMLLEFSQYLENYLWINYSPEVSSNSYLMSICCIVNEKFRENVPAWEVFKKEPTHFP
YFFKCVMEACLTGEELGLSLREQTVLLIFLDHCFNSLEVDIIREQVQQLISLPMWMCLLP
SRLQHEMKKVPKLQKFWNLIKKNYEKMDAKDAEQAKRERSFLSTLIKKFLRVLNSIPSSG
TGPISMEKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVSCHLSGLIQQEKEGHLF
CQLLDMLKFYTGFEINDQTGNALTQKEMTTLHYDRITSLQRAAFAHFPELQDFALSNVAA
VDTRQSLTKHFGHLSPNTLHRVASYLCLLPELPEGKDTSYDKEMLLELLVSRHERRISQI
EQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLEST
YEIRQDIEDIVLRMKPWQSEYGGVVFGGWARMAQTIVSFSIVEVAKPNIGENWPARVRAD
VTLNLNVQNHIKSEWEGLRKHDVCFLITVRPTLPYGTRFDRRQPFREQTGLVYVRGCEVQ
GMLDDKGRVIEEGPDPKPKLRGDSRTFRVWLDPNQYQQDMTNSIQNGAEDPYETFNIIMR
RKPKENNFKAVLETIRHLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISSLDFNDTF
LSIDNLKSCFPGYTVKVTEEDPAKQVPPFRIKFPVKNVKGKKRKADEESEKTEEDNTLIV
EPHVIPNRGPYPYNQPKRNNIPFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISN
LYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDFSRYGRVN
YVLARRLELLREVARLQESLGVPGDVSYTCETAGHFYLYQVMSRWEEYISKVRPKQGREV
SVQDVAAHFPFNKYFSNAPQPVFKGQSYQEDMDIAEGCYRHIRKIFTQLEEFRAFELLRS
GLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQ
NPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQGRA
RASLCNLYNWRYKHLGNLPHVQSQPEFQAPNAGFAYDFQLINVENFNGIGESEPNPYFYQ
NLAEAEYSVALYMYMRLLGYPAERISILTTYNGQKHLIRDVINQRCANNLFFGQPNKVTT
VDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPA
FNQLTALPLQLHIRPQEYYNSTEERSKEPARVIQDMPEMANLVYNMYMHMMQRTQQYRQQ
QQILPPPQQVTTEEESDVNMREEEEKKEGQPIEEKKEDVTGDKAEQKESEMEIEMESGVE
EQHTEEHAKMPEHPGRDSDSGDSEEDEP
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggacgcgcgggtgaagaagacggcggcgccatcagtggatcagattaacgcc
gaatatgttacacagctctcaaataaattttgggctccccacgcaaagaataaactaccg
tttgattcgaaggtcgttgaagacgtctatcaaaatgagattctcaagtcaaaatttgca
atcagaaaaatcatgttgctggaatttagccagtaccttgagaattatttgtggataaac
tacagcccagaggtgtccagtaatagctatctgatgtccatctgctgtatagttaatgag
aagttcagagaaaatgttcctgcttgggaggtttttaaaaaagagcccactcacttcccc
tactttttcaagtgtgtaatggaggcctgtctaactggagaagagctcggactgtcacta
cgggaacaaacggttctgctgatcttccttgatcactgcttcaacagtctggaggtagat
ataatccgagaacaggtgcagcagctcatttctctgcccatgtggatgtgcctcctgccg
tcacgactccaacacgaaatgaaaaaagtccccaaactgcagaagttctggaatctcata
aagaagaactatgagaaaatggatgcgaaggatgccgaacaagccaaaagggaacggtcc
tttctctctacactcataaagaagtttctcagagtgctgaattccatcccatcatcaggt
acaggccctatctccatggagaaggtgcactactgcgagagattcatcgagctcatgatt
gacttggaggcacttctcccaacacgccgctggttcaacactgtgctggacgactctcac
ctggtggtcagctgccacctgtctggtctcatacagcaagagaaagaaggtcaccttttc
tgccagctgctggacatgttgaagttctacaccggctttgagatcaatgaccaaaccggc
aacgctctcacacagaaagagatgaccactcttcactacgaccggataacttcactgcag
agagctgctttcgcacactttcctgagctgcaggattttgctctctctaatgtagcagct
gtggacactcggcagtcgctcaccaaacattttggtcacctcagtcccaatacccttcac
cgggtggcgtcatacctgtgccttttacctgagcttccagaagggaaggacacctcctat
gacaaagagatgcttttagagctattggtgtcacgtcatgagcggagaatctcacagatt
gagcaacttaaccagatgcctctttatccaaccgagaagattatctgggatgagaacatt
gtccccaccgagtattactctggcgaaggttgcttagctctgccaaagcttaatctgcag
ttcttgactcttcacgattacctgctgagaaacttcaacctattccgtctggagtctacc
tacgagatcagacaagacatagaagacattgtgttgcgaatgaagccatggcagtcagaa
tatggtggagtggtgtttggtggctgggctagaatggcacagactattgtgtccttctcc
atcgttgaagtggcaaagcctaacattggagagaactggcctgctcgagtccgtgctgat
gtcactctgaacctcaatgtgcaaaaccacatcaaatctgagtgggaaggtttgcgtaag
catgatgtttgttttctgatcaccgtgcgtcccaccctaccctacggcacacgctttgac
cggcgccagccctttagggagcagacaggcttagtgtatgtgaggggctgcgaggtgcaa
ggcatgctggatgataaaggccgggtcattgaggaaggtcctgatccaaagcccaaacta
aggggtgactcgagaacattccgagtgtggctggacccgaatcagtaccaacaggatatg
accaacagcatccagaatggtgctgaggatccctacgagactttcaacatcataatgaga
cgcaagcccaaggagaacaacttcaaggctgtgctagagacaatacgccacctaatgaac
actgagtgtgttgtccctgattggctgcatgacatcatcctgggatatggtgaccctggg
agtgctcattactccaaaatgcccaatcagatctcgtccctggacttcaatgacaccttc
ctgtctattgataatcttaagtcctgtttccctggttacacagtgaaggtcacagaggaa
gacccagccaagcaggtcccaccattcagaatcaagttccctgtaaagaatgtgaaaggg
aagaagcgaaaagcagacgaggaaagcgagaaaactgaagaagataacacactgatagtg
gaaccccatgtgattccaaaccgtggcccctatccttacaaccaacccaaacggaacaac
atcccatttaccccaacacagattgaggctattcgtgcaggaatgcagccaggcctcacc
atggttgtaggccccccaggtacaggcaaaacggacgtagccgtgcagatcatctccaat
ctctaccacaacttccctgagcaaaggacactgatcgtgactcactccaatcaggcactg
aaccaactgtttgagaagatcatggcactggacatcgatgagcggcacctcctgcgtctg
ggtcacggagaggaggcgctggagactgagaaggatttcagcaggtatggaagagtgaac
tatgttctggctcgaaggctggagctgctcagagaggtggctcgcttgcaggagagtctc
ggcgtcccaggcgacgtgtcctacacctgtgaaacagccggccatttttacctttatcag
gttatgtcacgttgggaggaatacataagcaaggtcaggcccaaacagggccgtgaggtg
agcgtacaggacgtggctgcacacttccctttcaataagtacttctcaaatgcaccccag
cctgtctttaaggggcagagctaccaggaggacatggacatagcagaaggctgttaccgt
cacatccgaaagatcttcacccaactggaagagtttcgggcctttgagctgctgcgcagt
ggattggacagatcaaaatacctgctggtgaaagaagctaaaatcattgccatgacctgc
acgcatgccgctctcaaacgccatgacctcgtggagctcggctttaagtatgacaacatc
ctaatggaagaagcagctcagatcctggagattgaaactttcattccgctcttactgcag
aaccctgaggatggatacagtcgtctgaagcgctggatcatgattggtgatcatcaccag
cttcctcctgtgattaagaacatggccttccagaaatactcaaacatggagcaatctctg
ttcacacgctttgtgagattaggagtgcccacagtggacctggacgctcagggccgagct
cgtgccagtctgtgtaatctgtacaactggcgctataagcatctaggaaacctccctcat
gttcagagccagccagagttccaggctcccaacgcaggtttcgcctacgacttccaactc
atcaacgtggagaatttcaacggaatcggggagtctgaacccaatccttacttctaccag
aaccttgctgaggcagaatactcggtggctctgtacatgtacatgaggctgttgggttac
ccagcagagcgcatcagcatcctcactacttacaatggccagaagcacttaatccgagac
gtcatcaaccagcggtgtgccaacaacctcttcttcggccagcccaacaaagtaactaca
gtggacaggtttcagggtcagcagaatgactacatcatcctctcgctggtgcgcaccaaa
gctgtaggacatttgagagatgtgcggcgtttagtggtagctatgtccagggccaggctg
ggtctatacatctttgctcgagtttcccttttccagaactgctttgagctgacgcctgcc
ttcaatcagctgactgcactgccgctgcaactgcacattcgacctcaagagtactacaac
tccactgaggaacgttccaaagagcctgctcgggtaatacaggacatgcctgaaatggcc
aacctggtctacaacatgtacatgcatatgatgcagagaacacagcagtacagacagcag
cagcagatccttccaccccctcagcaagtaacaacagaggaagagtctgatgtgaatatg
agggaagaagaagagaaaaaagaaggtcaacctatagaagagaaaaaggaagatgtgact
ggagataaggccgagcagaaagagtctgagatggagatagagatggagtctggtgtggaa
gagcagcacacagaggaacacgctaaaatgcctgaacacccaggtagagacagtgacagc
ggggacagtgaggaggacgagccctag
DBGET
integrated database retrieval system
