Tachysurus fulvidraco (yellow catfish): 113659340
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Entry
113659340 CDS
T08119
Symbol
psmc1a
Name
(RefSeq) proteasome 26S subunit, ATPase 1a isoform X1
KO
K03062
26S proteasome regulatory subunit T2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
113659340 (psmc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tfd03051
]
113659340 (psmc1a)
Proteasome [BR:
tfd03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
113659340 (psmc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_3
AAA_25
AAA_14
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
NB-ARC
AAA_33
AAA_7
AAA_24
Parvo_NS1
ABC_tran
PhoH
NACHT
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
113659340
NCBI-ProteinID:
XP_027027845
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All DBs
Position
12:13134483..13138986
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AA seq
440 aa
AA seq
DB search
MGQNQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaatcagagcggaggacatggtcctggaggtgggaagaaagatgataaagat
aagaaaaagaaatatgagcctccgattcccacaagggtggggaagaagaagaagaagacg
aaaggcccagatgctgctagcaagcttcctttagtaactccacacacacagtgcagactg
aagctgctgaagcaggagaggatcaaggactatctgctgatggaggaggagttcatcagg
aatcaagagcagatgaagccacttgaggaaaagcaggaggaagagaggtctaaagttgat
gacctgagagggacaccgatgtcagtaggaactcttgaagagatcattgacgataaccat
gccatcgtgtctacatcagtgggctctgagcactatgtcagcattctctcctttgtggat
aaagacctgctggagccgggctgttctgttttactaaatcacaaggtgcatgcagtgatc
ggtgtgctgatggatgacacggatcctctggtgactgtgatgaaagtggaaaaagctcct
caggagacatacgctgacattggaggcctggacaaccaaattcaagagatcaaagaatca
gttgagcttccacttacacaccccgagtattatgaggagatgggaataaagcctcctaaa
ggagtcattctttatggaccaccagggacgggtaagactctgctggctaaagctgtggcc
aatcagacatctgccacattcctgagggtggtgggttcagagctgattcagaaatacctg
ggtgacggacccaaactagtgcgagaactgttccgagttgcagaggagcatgctccctcc
atagtcttcatcgatgagattgatgccattggaacaaagagatatgactccaactctgga
ggagagagggagatccagaggaccatgctggagctcctgaaccagctggatggatttgac
tcccgtggagacgttaaagtaatcatggctactaatcggatcgagacacttgaccccgca
ctcatccgtccaggaagaatcgaccgcaaaatagagttcccactacctgatgagaagacc
aagcgcagaatcttccaaattcacacaagcaggatgacggtggctgatgatgtaaccctt
gatgaccttatactagctaaagatgacctctctggtgctgacataaaggcgatttgtaca
gaagccggacttatggccctgagggaaaggaggatgaaagtaacaaatgaggacttcaaa
aagtctaaagaaaatgtgctctacaaaaaacaggaagggaccccagagggcctctacctt
tga
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