Tachysurus fulvidraco (yellow catfish): 113659395
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Entry
113659395 CDS
T08119
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113659395 (msh4)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113659395 (msh4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
AAA_29
ATPase_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
113659395
NCBI-ProteinID:
XP_027027933
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All DBs
Position
12:11480224..11492841
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AA seq
921 aa
AA seq
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MHRSSTEEVTAGYSSDAGASRTSSLSEASCRRQEDGAPSASPLSGSHTPHSASSCSRPAS
TSTLADVQTKTLSKTPATAGVNASSSSWTSREVYSSLCRSSCTPQLRRTPGSARRTLLGP
APQRELNMTSSSSASVCHAASVIVAVVEGRGLARGEIGMASINTRSPELVLSQFADTGTY
AKVITKLHILVPLEILMPDTASEKGQGTKLYNLITENFSSVAFTAIQRKYFNERKGLEYI
QQLCAAEFNTVLMDVQTKYYCLAAVAALLKYYEFIQNSVYAPKSLKVSFTGSEQTAMIDA
VSARNLELVINNRGHRSEHTLLEVLNYTKTPGGERRLRSNILEPLLDVDTINTRLDTIQE
LLQSEELFFGLKGAITQFLDIDQLLSALVQLPKQETVEVAEAKIMHVIQLKHTLELIEPI
KIVLKDAKTALLKAYYTSLDDSRFNSILDQIKTVINNDTSYMKGSLNMRTQKCYAVRPNV
NELLDIARRAYTEVVDDIAGLVDQLGQKYGLPLRTSFNTTRGFFIQMRLEGFGLPDGQLP
GEFIKVTRQKNNYSFTTLDLMKMNDRCDEALKEIFHMSYIVICRLLNEVYKHIHCLYKLS
DAVSMLDMLLSLANVCTISDYVRPEFTDTLAIKQGRHPILERIAGQQPIPNNSHISEGNN
FVIITGPNMSGKSTYLKQVALCQIMAQIGSFVPAEFASFRVADQIFTRIGVDDDFETSSS
TFMVEMKEVSYIIHNASNRSLIIIDELGRGTSAEEGIGICHSVCEFLIGLKAFTLFATHF
LELCQLETLYPNVENQHMQVQHMRGTESGSESVVYTYLLTQGFSEESNYGIRAAENTSLP
LSIIQEAKSISSKVSLKLWAKHHSDPTTLRQGAVFRLATRLIQTARNSKLDPDSLRLYLK
GLKRRHEAEIKDRLASIETEE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtagcagcactgaagaagtaacagccggatacagttcagacgccggcgcaagc
aggacatccagcttgagtgaggcttcgtgcaggcggcaggaggatggagcgccgtccgcg
tctcctctgtccggctcacacaccccacacagcgccagctcctgctctcgtcctgcatcc
acctccactttagctgatgtccaaacaaaaaccttaagcaaaactccagcaacagcaggt
gtgaatgcgtccagctcttcatggactagtagagaggtctacagttctctgtgcagaagc
tcatgcactcctcaactgagaagaacaccaggctcagctagacgcaccctgctgggtcca
gctccacagagggagctcaacatgacatcttcctcatctgcatccgtgtgtcatgctgca
tctgtaatcgtagctgtggtggagggccggggtttagccaggggagagatcggcatggcc
agcatcaacaccaggtctcctgagttggtactctcacagtttgcagatactgggacttat
gccaaggtaattaccaaactgcatatcttagtgcctcttgagattctgatgccagacact
gcaagtgagaaaggacaaggaaccaagctctacaacctcatcacagagaacttttcgtct
gtagctttcactgccattcaaaggaagtactttaatgagaggaaaggactggagtacatt
cagcagctctgtgcagccgagttcaacactgttcttatggatgtacaaaccaagtattat
tgtttggcggctgtagcagctctccttaagtactacgagttcattcagaactctgtctat
gctcccaaatctctaaaagtgagcttcacgggcagtgagcagactgccatgattgatgca
gtctcagccaggaacttggagcttgtaattaacaacaggggccacaggagtgaacacact
ctgcttgaggttttaaactacaccaaaacacctgggggtgagaggaggcttcgctcaaac
attctggagcctctgttagatgttgacaccattaacacaagactggacaccatacaggaa
ctgctgcagagtgaagaactcttctttggtctcaagggtgcaattacacaattcttggat
atagatcaactgctttctgctcttgtgcagcttcccaagcaagagacggttgaagtggct
gaagcaaagataatgcatgtcattcagctgaaacatacactagagctgattgaaccaatc
aagattgtgttgaaggatgcaaagacagccttactgaaagcttattacacttcactagat
gatagcagatttaacagcatcttggatcaaatcaaaacagtgataaacaatgacaccagc
tatatgaagggaagtctgaatatgcgcacacagaagtgctatgctgtgcggcctaacgtc
aatgaattgctagatattgcacgccgtgcatacactgaggtagtggatgatatagcagga
ttagtagatcagctaggacagaagtacggtcttccacttcgaactagttttaacactacc
cgaggtttcttcatccagatgaggctggagggatttggcttgcctgatggacagcttcca
ggagagttcatcaaagtaactagacaaaaaaacaactacagcttcactacattagacctg
atgaagatgaatgatcgctgtgatgaagccttgaaggagatatttcacatgtcttatatt
gtaatatgcaggttactcaatgaggtctataaacatattcactgcttgtataagctgtct
gatgctgtatccatgctggatatgttactctcccttgcaaatgtttgcactatttcagac
tacgtgcggcctgaattcactgatacactagcaataaaacaaggccgccatccaatcctg
gagcgcattgctggccagcagcccatccccaacaacagccatatctctgaaggaaacaac
tttgttataatcacaggcccaaacatgagtggcaagtctacttatctcaaacaagtggcc
ctctgccaaatcatggctcagataggatcatttgtgcctgctgaatttgcctccttccgt
gttgctgatcagatattcactcggataggagtagacgacgattttgagaccagctcctca
acatttatggttgagatgaaggaggtgtcctacataatacacaatgcaagtaacaggtca
ctcattattattgatgagctgggacgtggcactagtgctgaggagggcattggaatttgc
cactcggtttgtgagttcctcatcggtctgaaggcattcactctgtttgccacccacttc
ctggagttgtgtcagttggagactctttaccccaatgtagagaatcagcacatgcaggtc
cagcacatgcgtgggacagaaagcggctcagagagtgtagtctacacctacctgctgact
caaggcttctctgaggaaagcaactatggtataagagcagcagagaacacctcacttcca
ctgtccatcatccaggaggccaagtctatatcatcaaaagttagcctaaagttatgggct
aagcatcatagtgacccaactaccctgagacaaggggcagtgtttcgtcttgccaccaga
ttaatacagacagccagaaattccaagttggatccagacagccttcgtctttacctaaag
ggcctaaaaagaaggcatgaagctgagataaaggatagattagcatccattgagacagaa
gagtga
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