Tachysurus fulvidraco (yellow catfish): 113659413
Help
Entry
113659413 CDS
T08119
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03060
Protein export
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
113659413 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tfd02044
]
113659413 (srp54)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
113659413 (srp54)
Secretion system [BR:
tfd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
113659413 (srp54)
Eukaryotic Sec-SRP protein
113659413 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
ResIII
DUF2209
AAA_33
SRPRB
NPHP3_N
AAA_17
AAA_22
nSTAND_NTPase5
AAA
MobB
APS_kinase
AAA_19
AAA_30
PduV-EutP
MeaB
nSTAND_NTPase7
6PF2K
Thymidylate_kin
AAA_31
Zeta_toxin
AAA_16
ATP_bind_1
AAA_18
Motif
Other DBs
NCBI-GeneID:
113659413
NCBI-ProteinID:
XP_027027971
LinkDB
All DBs
Position
12:13544595..13550001
Genome browser
AA seq
504 aa
AA seq
DB search
MVLADLGRKITAALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKSWTPTKGKNNIIMFVGLQGSGKTTTCTK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK
SENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRVQRVARGAGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagctgacttggggaggaagataacagcggcactgcgttccctcagcaatgcc
accatcatcaatgaagaggttttaaatgctatgctaaaagaggtttgtgctgccctgcta
gaagccgatgtgaacatcaaactggtgaaacagctcagagaaaatgtcaaggccgcaatt
gacctcgaggaaatggcctctgggctgaataagcggcgaatgatacagcatgctgttttc
aaggaacttgtcaagctggtggaccctggtgtaaaatcatggacacctacaaaaggaaag
aacaacatcatcatgttcgttggtcttcaggggagtggaaaaaccacaacatgtactaag
ttggcatattactaccaaagaaaaggatggaaaacatgcttgatctgtgcggacactttt
agagcaggtgcctttgatcagctaaagcaaaatgcaacaaaagctagaattcccttttat
ggaagttacacggaaatggatccagtcataatagcttctgagggagtcgaaaaattcaag
tcagaaaactttgaaatcatcattgttgacaccagcggtcgacataagcaagaagattca
ctgtttgaagaaatgttgcaggtttcaaatgctgtgcaacccgacaacattgtgtatgta
atggatgcgtccattggacaggcttgtgaggctcaggctaaggccttcaaagacaaggta
gatgtggcatctgtcattgttacaaagctggatggccatgctaaaggtggtggagctctc
agcgcagttgctgccacaaagagtcctatcattttcatcggcacaggagagcacattgat
gattttgagcccttcaaaactcaacctttcataagcaaactgcttggcatgggagacatc
gagggactgatagataaagtcaatgagcttaaacttgatgataacgaggagctaattgac
aaacttaaacatggtcagttcacgctcagggatatgtatgagcagttccagaacatcatg
aagatgggaccttttggacaaatcatgggtatgatcccaggttttggaacagacttcatg
agtaaaggcaatgaacaggagtctatggccaggttaaagaaactcatgaccataatggat
agtatgaatgaccaagaactggacaataaagacggtgcgaaattgtttagtaagcagccg
aatcgtgttcagagggtggcacggggtgcaggtgtagccaccagagatgtgcaggagctg
ctaacccagtatacaaagtttgcccagatggtcaagaaaatgggtggaattaaaggctta
tttaaaggaggagacatgtccaagaatgttaacccatctcagatggccaaactgaaccaa
cagatggcaaagatgatggatcccagagtgctgcaccatatgggtggcatggctggtctt
cagtcaatgatgaggcagtttcagcaaggggctgctggcaacatgaaaggaatgatggga
ttcaacaatatgtga
DBGET
integrated database retrieval system
