Tachysurus fulvidraco (yellow catfish): 113659428
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Entry
113659428 CDS
T08119
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113659428 (stxbp5b)
Membrane trafficking [BR:
tfd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113659428 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
113659428 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_VPS8
Synaptobrevin
CFAP43_N
RAB3GAP2_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
113659428
NCBI-ProteinID:
XP_027027999
LinkDB
All DBs
Position
12:14284324..14313617
Genome browser
AA seq
1147 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSASTQPVNRENDIIQETLQSEHFQLCKTLRHGFPYQPSAM
AFDPVQKILAVGTQTGALRLFGRAGVECYCQHESSSAVIQLQFLINEGALVSGLADDSVH
LWNLRQKIPAILHSLKFTRERITFCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIMW
NKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYSYDEAIHSV
AWHHEGKQFVCSHSDGTLTTWNIRSPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKTT
RTGDPFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDYQEPY
AVVVLLEKDLVVIDLTQTGYPIFENPYPLTIDESPVTCCEYFADCPDELIPALYSVGSRQ
KRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSVKFWDASALMLQVLYKLKTAKVFE
KARNKEEKPSTDIVDEDPFAIQSLSWCPESRMLCVAGVSAHVIVYRFSKQEITTEEVQLL
EVRMQCELNDVDSPDGGGDHASAVSTPGASSSPQSSAPQTQLSTSSNNSTDGLRDNVPCL
KVRNSPFKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSAYGLVVFGNGNGLVVVDYLQK
TLLLNVSTAELYGSSDPHQRQPRSPRKARQPSGGFCDGHDASSALEDRCKSPTSGCLGSD
SPCHSDDDSKQNFFERVKLKSRLLSKSVANDFAKMSWKFSLAADQKQDDAKDNSFSRSRS
SSVASIEKESREVISSLHFCDSLSRKSDVAASPSLWVGTSVGTMLAITFNVPSTPEQRMQ
QTVGVSFCGSVIRLKGGILHMALMDSSGSLQPLSSECWYDLNAPEEEREKTRRRRPASPP
SLLENQDTHYAVVCSEKQAKVVALTSQNCIFEHNITETSYVLRADVVVMPAGICIACFCA
NGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCD
NLQEMLGELFTPVETPEAPNKGFFKGLFGGGAQSLDREDLFGEMTAGKASRSLAQHIPGP
GGMEGMKGAASGVVGELARARIALDERGQKLGELDERTAAMMSSADSFSKHAHDVMLKYK
DKKWYQL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcagaaaggtgttggacggcttgactgcggcttcctcttcctca
tccgcatctactcagccggttaacagggaaaacgatataattcaggagactctgcagtcc
gagcatttccagctctgcaagacattgcggcatggctttccttaccaaccctcagccatg
gcttttgaccctgtgcaaaaaatactggcggttgggacacagactggagcattaagactt
tttggccgcgcaggtgtagagtgttactgccagcatgagagcagctcggctgtcatccag
ctgcagtttctcatcaatgagggggcgctggtgagtggtttggctgatgacagcgttcat
ttatggaatctgaggcaaaaaattccagccattctccattcccttaaattcaccagggag
aggatcacgttttgccacctgcccttccagagtaaatggctttacatcggaacagagaga
gggaacattcatattgtcaatgtggagtccttcactctctcaggctatgtcattatgtgg
aacaaagccattgaactctcttcaaaaacacaccctggtcctgtggtacatatcagtgat
aatcctatggatgagggaaagcttttgattggatttgagtgtggtattgttgtgctgtgg
gacttgaaatcaaagaaagctgactaccgctacagctatgatgaggcgatccactcagtg
gcctggcaccatgaggggaaacagtttgtgtgcagtcattcagatggtacacttaccaca
tggaatatacgctctcctgccaagccggcacagatcattacaccacatggcaagcagcct
aaggatggaaaaaagccagagccatgcaaacccattctgaaagtggaatacaaaacaacc
agaactggggatccttttatgatactgtctggaggtctttcatatgatacagttggacgc
agggcctgtctgactgtaatgcatggaaaaagcactgctgtacttgagatggactatcct
attgtggatttcctaactctgtgtgaaactccctatccgaatgattatcaagagccttat
gctgtggtggtcctgctggagaaggatctagtagttattgacctcacacaaactgggtat
cctatctttgaaaacccatatcctctgaccatcgacgagtctccagtgacctgctgtgaa
tactttgctgactgtcctgatgaactaatccctgcactttactctgtgggatccaggcaa
aagagacagggctacagcaaaaaggaatggcctataagtggtggtaattggggccagggc
acacaaagctatccagagatcataatcacaggacatgctgatggatcagtcaaattttgg
gatgcctctgcattaatgctgcaagtgttgtacaagctgaaaacagcaaaggtgtttgaa
aaagctcgtaacaaggaggagaagcccagcacagacatagtggatgaagaccctttcgct
atccagagtttgtcctggtgtccagagagtcgcatgctgtgtgtggctggggtgtctgct
cacgtcattgtttaccggttcagcaaacaggaaataaccacagaggaggttcagctgttg
gaggtgcggatgcagtgtgagctgaatgacgtagactctccagacggtggaggggaccac
gcatcggctgtatccacaccgggagcttcatccagccctcagtccagtgctccccaaaca
cagctatccaccagcagcaacaattccactgatggcctgcgagataacgtgccctgcctc
aaggtgaggaacagtccgttcaagcagtctccaggctaccaggtggaactggtcattcag
ctagtgtgggtcagtggggaaccaccacaacagatcaccagcctggctgtcaactctgcc
tatggcctagtggtttttggtaatgggaacggcctggtggtggtggattatcttcagaag
actctgctgctcaatgtgagcacagcagaactgtacggctcctctgatccccaccagaga
cagccacgctcaccccgcaaagccagacagccctctggaggtttctgtgatggccacgat
gcttcttctgccttagaagatcggtgcaaatctcctacatcaggctgcttaggatctgac
tccccctgccattctgatgatgacagcaaacaaaatttctttgaaagggtgaagttgaaa
agcagactgttatcaaagagtgttgccaatgactttgctaagatgtcatggaaatttagc
ttggctgctgatcagaaacaagatgatgccaaggacaactcctttagccgctcacgcagc
tccagcgtggccagtattgaaaaagagtcacgtgaggtcatctcttcattgcatttttgc
gactccctgtccaggaagagtgatgtggcagcatcccccagcctttgggtgggcacctct
gtgggcactatgctggctatcaccttcaatgtgccctctacccctgagcagagaatgcaa
caaacagtaggcgtctctttctgtggttcagtaattcgtttgaaaggaggcattttgcac
atggcattaatggactcaagtggctctctacagcctctttcctctgagtgctggtatgac
ctcaatgcccctgaggaggagagggaaaagacgcggaggcgccggcctgcctcaccccct
tctttactggagaaccaagacacccactacgctgtggtctgttctgagaaacaggccaaa
gtagtggccctgacctcacagaactgcatctttgaacacaacatcactgagacctcgtac
gtgctgagggccgacgttgtggtcatgcctgctggaatctgcatcgcctgcttctgtgcc
aatgggcatatcatgactctgagtttgcccagtctgcggccactattagatgtgaactat
ttgcctctgacggacatgcgaatagcccgaacgttctgcttctccaacctgggccaggct
ctgtatctcacctcacctacagagatccagagaatcacctacagtcaggaaacctgcgac
aacttacaggaaatgctgggagagctgttcactccagtcgagacaccagaggctcctaac
aaaggcttttttaaaggtctgtttggaggtggggcccaatccctggatagagaggatctc
tttggagaaatgacagcagggaaggcctcacgcagccttgcccagcatattccaggccca
ggtggcatggagggcatgaaaggggcagcttcaggagtggtgggtgagctggcacgggcc
cggatagcgctagatgagagaggacagaagctcggtgagctggatgaaaggacggcagcc
atgatgagcagcgcagactcattttcgaagcatgcacacgatgtgatgttgaagtacaag
gataagaagtggtatcagctctga
DBGET
integrated database retrieval system
