Tachysurus fulvidraco (yellow catfish): 113659513
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Entry
113659513 CDS
T08119
Symbol
virma
Name
(RefSeq) protein virilizer homolog isoform X1
KO
K22910
protein virilizer
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113659513 (virma)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113659513 (virma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
113659513
NCBI-ProteinID:
XP_027028133
LinkDB
All DBs
Position
25:7604108..7626849
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AA seq
1824 aa
AA seq
DB search
MAADSSMELLFLETFKHQSAEFTNVDVVRFPYDVLIAEVRVIPPGIKSHSSLPDSRAFGE
TAPHAFQLDLFFNNVSKPSTPVFDRLGSLEYDENKSIVFRPSGKINTDGLVLRGWYTCLT
LAVYGTAERSHGHDRDSPPPPPPPPPQQQTPASKRTIKHEWDNEEHFNGSPPRPQPRGPR
TPPGPPPPDDDEEDALPVPGPVKEESVERGDDDLEPVSPERNSLPPSDAYSDQEQEEDEG
AGEDEDNDARTEGSEPEEEEEEDEEEGEEEMEDDGEGDDGYEQISSDEEDLESATFKLPA
FDLDCTPEDLASLPTVQYDPYERELRPLQHFTAPHMTRYEAELNCLKPIDLQDQTSPWAE
SAAKLSELLEAWGEGQERGAGWVTALEEVSALLVKGMSFLEVKDPEGQKEQLKLLVDWTS
TALNLDLALAQPIALNLRQLKAGAKLASSLAECGTQTVQALLEKGIMGRLLDLLFADHVS
STLKLSILRSLDSIISEPLGMEALMRAGSQDSEETSGYQRLLELFLLDQTVRVATAGAAI
MQKGHLYEVLIDLQKTAGVWAEHHPTDTEAGERERGERESTDREGEEGDRENPEAEPESP
MDIDTLLESNSLSEADLERLQGLIEELLHLLETAPHCMVQPPGKAFPTTARITGPPERDD
PYPTLYRYMHAAHFLESLAVVLTSPATCSHVGVLQAVRELMRFLSQSQQGLLFLLSQHEP
TNILLRLLTPLTQVAPLPHLAHLAPMTPLLEAEGEETATAAETSLDDGFWVWLMQALHAL
QAVAELNGLELEEGDNPDVLSTLHSLYLISFSSTGRNAVTHVLSMDVNLSCLVNLLEHHA
KEGQGEGKARKSVTYNYACMLVLLVVQSSAELKMMEHYAAPLLSICKADENNAKLQELSK
WLEPLEKIRFDMSGIPALIDYIKQNLENVMTPDGVGLVTSLRVLCHIACPPATVPGQQKD
LKWNQAVITLFSAEGMDTFIKLLQKLTSVLLPHWRLHGPLGPTPQRLMMMSLSSCTLRLM
RAMMSELLHGGVCEFRDVRIPAVCVTLHTIACSTPLGNLDAEELRLQNDVTDVLLTFTHA
VREQETGSEETVAANSWSLMLKEVLNSITAAPENIYSSLSLLSELLPLPLPMQTTQALSV
QDIGVAMNTRKLWSMHLHAQARTLQDVMRCVCVSSCPPLLSVIRRVCVQLCDLAAPTATV
VMRTLLEQLHEEIQLEVMTPQLTRLLALLDSLVSQRSCKAAMLALLGGAIRSEVRSEGRP
DDKPTDVLSILFAMLLPPVDANLSLQQNAELIASIIQSLCDQDISLIVSGSGEVCVSEAE
QLANALPSKDMMPGICDRMLEVLKHTHSSYTIQLTCLRTMMFLTEHDYGLYHLKSSLKKH
NSAVSSLLRREITSFNKETAELLSALLDFLRQILNNDSVDEDIDSRSLALNVSDMKQLLQ
WKDDSTEHPLAELEKHITELLKEDDSLEALLENVVGLRQIVESAGETVGQAEPETEPTLP
SPEPLQTQFNNRTVYILSDLPDDQLRTLWYSPFQSDDMETEQDMVKVDLVTLAQQCCPDL
NLKAELDRLFLSEPTSPGHSKPAKGFRLGKHKHETFITSSGKSDYVEPAKRAHIMLAPRG
RGRGAFNQLNRPHDIFRQRKQNTSRPPSMHVDDFLAAEFKEVSLPAGLALPKRPLKGGGA
KPPTRGLFTGGTRGRGFQSHTRFFTPPAPKSALLASNYPRREGGRGQTWSAPVTAVTHRG
TYSEPRGAQSNFTRPLPSRQPPTGAYRLAPRDRAPRGRGAGLSWLSGGLGVGGGGVSNSG
RGQGKFSSSGSGGGRGRHVRSFTR
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgattcctcaatggagcttctgtttttagaaacctttaagcatcaaagtgca
gagttcacaaatgtagatgtggtgcgatttccgtatgatgtgttgatcgcagaagtcaga
gtcattcctcctggtatcaaatcccacagcagcctcccggacagcagagcttttggagaa
actgctcctcatgctttccagttagacctgttctttaacaatgtctccaaacccagcact
ccagtgtttgaccggttgggcagcttggaatacgatgaaaacaaatcaattgtcttcagg
cccagtgggaagataaatacagacggcttggtgctgcgtggctggtatacgtgcctgacg
ttggcggtgtacggtacggccgaacgctcacacggccatgaccgcgattctccaccccca
cctcctccccctccacctcaacagcagacacctgcctccaagaggaccatcaagcatgag
tgggacaatgaggagcattttaacggcagcccacccagaccacaacccagaggccctcga
accccaccagggcctccaccgccagacgatgacgaggaggatgcacttcctgtgccaggc
ccggtaaaggaggagagcgtggagcgaggggacgatgatttggagcctgtttctcctgag
cgaaactctctacctcctagtgatgcctactcggaccaggaacaggaggaagacgaagga
gcaggggaggatgaagacaacgacgcccgcactgagggaagtgaaccggaggaggaggag
gaggaagatgaagaagagggtgaggaggagatggaggatgatggtgaaggtgatgatggc
tatgaacaaatatctagtgatgaggaggatctcgagagtgccacgtttaagctgccagct
tttgaccttgactgcacccccgaggacctcgcgtcactacccaccgttcaatacgatccg
tacgaacgcgagctccgccccctgcagcacttcactgcaccccatatgacccgctacgag
gccgaattgaattgtctcaagccgatagatctccaggaccaaacgtctccatgggccgag
tctgcagctaagttgtcagaactgctagaagcctggggggaggggcaggagcgtggtgca
ggctgggtaacagcattagaggaggtttctgctttgctagtgaaaggaatgagcttttta
gaagttaaggacccagagggccagaaagaacagctgaaactcctggttgattggacgtcc
acagctcttaatcttgacttagctctagcacagcccattgctctgaacctaaggcaactg
aaagcaggcgccaaactggcatcttctttagctgagtgcggtacacagactgtgcaggcc
ctgctggagaaaggaatcatgggtcgtttgctggacctcctgtttgccgatcacgtgtcg
tccacgctgaaactcagcattctgcgctctctcgacagcatcataagcgaaccgcttggc
atggaggcactgatgagagcaggctcacaagacagcgaagagaccagtggctaccagcgt
ctgctcgagctctttctgttggaccagaccgtccgagtggcgacggcaggtgctgccatc
atgcagaagggacatttatacgaagtactgattgaccttcaaaaaacagcaggtgtgtgg
gctgagcaccatcctacagacacggaggctggagaacgagaaagaggtgagagggagagc
acagacagagaaggggaggagggagacagggaaaaccctgaggcagagccagagagcccg
atggacatagacacgctgttggaatcgaattctctctccgaggctgatctggagaggctg
caaggtttgatagaagagttgctccacctgctggaaacagcacctcactgcatggtgcag
ccgcctggcaaggcttttcccactactgcacgcattactggacctccagagcgagatgat
ccttatccaactctctataggtatatgcatgctgctcacttcttggagtcattggcagtc
gtcttgacctctccggccacttgcagccatgttggagttctgcaggccgtgcgagagttg
atgcgcttcttgtcccagtcccagcagggcctcttgttcctcctgagccagcacgagccc
actaacatccttttacgtctgctcacgcctctcacacaggtggctcccctcccacaccta
gctcacctggccccaatgacccctctattggaggcagagggggaggaaactgccacagct
gcagagacctcattggatgatggcttttgggtgtggttaatgcaggccttacacgcactg
caagctgtcgcagagctgaatggcttggagcttgaggaaggtgacaatccagatgttttg
tccacactccacagtttgtatctcatcagttttagcagcacgggacgaaacgcagtcaca
cacgtcctcagcatggatgtcaatctcagctgcctggtcaacctgcttgagcatcacgcc
aaagaggggcagggggagggaaaagccagaaagtctgtaacgtacaactatgcctgcatg
ctcgttctgctggtggtgcagtcgtctgctgagctgaaaatgatggaacattatgctgcc
ccgttactcagtatctgcaaagccgacgagaacaacgcaaagcttcaagagctaagtaaa
tggttggagccactggagaagatacggtttgatatgagtggcataccagcacttatcgat
tacatcaagcagaatttggagaatgtaatgacgccagacggagtgggccttgttacttct
ctcagagtgctttgtcatatcgcctgtccaccagccactgtgccaggtcagcagaaggac
ctgaagtggaaccaggcagtgatcacactgttcagcgctgaaggaatggacacctttatt
aaactcctccagaagttgacctctgtgttactaccccactggcgactgcatggacccttg
ggccccacaccgcagagactgatgatgatgtcattgtcatcctgcacgctgaggcttatg
cgagctatgatgagcgagcttctgcacggcggcgtgtgcgagttcagggatgtgcgcatc
ccggccgtctgcgttaccctgcatacgatcgcatgctccacgccgttgggaaacctggat
gccgaggagctgcgcctgcagaacgacgtcactgacgttttactgacttttacacacgcc
gtgcgcgagcaagagacgggctctgaggaaaccgtagcagccaacagctggtctctcatg
ctgaaagaagtgctcaactctattactgctgcaccagagaatatttacagcagcctcagt
ctgttatcggagcttctgcctttaccactgcccatgcagaccacgcaggctttgtcagtt
caagacatcggagtggcgatgaacacccggaagctgtggagtatgcatctgcatgctcag
gcccgcactttacaggacgtgatgcggtgtgtgtgtgtgagcagctgtccaccgctcctg
tctgtgatccggcgagtgtgtgtgcagctctgcgaccttgcagcaccgactgccacagtg
gtcatgaggaccctgctggagcagctgcatgaagagatacagctggaagtcatgaccccg
cagttgacgaggctattggctctgctagactcactggtgtctcagcgctcatgtaaggct
gccatgttggctctgctgggcggagctatacgcagcgaggtaaggagcgaggggcggcct
gacgacaaaccaacagacgtgctgtcgatactttttgcgatgcttctcccaccagtggat
gccaacctatcgttgcagcaaaacgctgaacttattgcctcaattatccaatcgctgtgt
gaccaggatatttctctgattgtgagtggctcaggggaggtgtgtgtgtctgaggcagag
cagttggctaatgccttgccttcaaaggacatgatgccgggtatatgtgacagaatgttg
gaggttctcaaacacacgcacagcagttacactattcaacttacttgcctcagaactatg
atgttcctgaccgaacacgactatgggctctatcacttaaagagctcattaaagaaacac
aattctgccgtgtcctcgctgctccggagagaaatcacatcttttaacaaagaaacagct
gaactgctttctgctctgttggatttcctgcgacagatcctcaataacgactcagtggat
gaagatattgactctcgctctttggctttgaacgtgagtgatatgaaacagctgcttcag
tggaaagatgattctacagaacatccgcttgcagagttggagaaacacatcacggaactc
cttaaagaggatgattccttggaagctctactagagaatgtggtgggtctccggcagatt
gtcgaaagcgctggagagactgtgggccaagcagaacctgaaacggagcccactctacct
tccccagaaccactccagacccagtttaacaacagaactgtatatatcctctctgatcta
ccggatgatcaactgcggactctttggtattctccattccagtcagatgacatggagacc
gaacaggacatggttaaagtagacttggtcacactggcacagcagtgctgcccagatctt
aatttgaaggctgagttagaccgtttgttcctgagcgagcctacttcaccaggacacagc
aaaccagcaaagggctttagacttgggaagcacaagcatgaaaccttcatcacctccagc
ggcaaatcagattatgtggagccggctaaacgtgctcacatcatgctagcccctcgcgga
cgcggccgaggcgcttttaaccagctgaacagaccgcacgacatcttcaggcagcgtaaa
cagaacacgagtcgtccaccctccatgcacgtagatgacttcttggctgcagagttcaag
gaagtgagcctgcctgcaggcttggctctacctaaacgccctctcaaagggggaggagcc
aagccacccactagaggcctatttactggtggaaccagaggacggggcttccagagccac
actcgcttcttcactccacctgcacccaagagtgcactgcttgcaagtaattatcctcgt
cgtgagggtgggcggggccaaacgtggagtgctccagtgactgcagtcactcacagaggg
acatacagcgaacccagaggagcacaaagtaactttacacggccattaccatcgaggcag
ccaccaacaggtgcataccgtttggctccacgtgaccgtgcccccagaggaaggggtgct
ggtctttcctggctaagtggaggacttggtgtaggaggtggtggagtaagtaacagtggg
cgtggtcaagggaaattcagcagcagcgggagcggaggtggacgaggccgacacgtacgc
tcattcactcgctaa
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