Tachysurus fulvidraco (yellow catfish): 113659539
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Entry
113659539 CDS
T08119
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113659539 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113659539 (capn3a)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
113659539 (capn3a)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C2: calpain family
113659539 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
113659539
NCBI-ProteinID:
XP_027028191
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All DBs
Position
12:11954265..11964862
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AA seq
713 aa
AA seq
DB search
MPYTPSGFICDRLIRERERKDGEGSVNKPLRFSGQDFNTLKQDCLQKKVLFEDDTFPATV
DSLGYKELGHKSSKVKNIVWKRPKDICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVVPQEQSFSDNYAGIFHFQFWRYGDWVDVVVDDRIPTINNELVFTKSAERNE
FWSVLLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKELYKIMKKALDRG
SLMGCSIDALVPARLETRTATGLVKGHAYSVTAVGECKQSIKKKSKVHLVRLRNPWGQVE
WNGPWSDNSKEWESISKEDKEKLHLQNAEDGEFWMSFDDFMKNYTKIEICNMTPDALDDD
KLHKWTVSMNEGRWVRGCSAGGCRNYLDTFWTNPQYRLRLLEEDDEQDNDEVACSFVVAL
MQKNRRKERKMGANLFTIGFSIYEVPKQMQGNKQHMQKEFFLLNSSKARCKAYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFLLRVFSEKKNVSEEIENRIAADHPVPAPASAGEET
EEDQQFRTIFQQIAGDEMEISANNLRNVLNRVLADHRDMNKEVFSLESCRSMIAFMDMAG
TGRLNLQEFKQLWNKIKKWQETFKHYEAEQTGFISSYDMRNAINDAGFHLNNPLYNIITM
RYANENMNIDFDSFVSCLVRLEGMFRAFQAFDQDGDGTISLSVLEWLQLTLYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccatcagggtttatttgtgaccggctaatccgggaaagagagagaaag
gatggagaaggatctgtaaacaaacctcttcggttcagtggccaggactttaacaccctg
aaacaggattgtcttcagaaaaaggtgctatttgaagatgatacattcccagcaactgtg
gactctttggggtacaaggaactgggccacaagtccagcaaagtcaagaacattgtctgg
aaaagacccaaggatatttgtgataatccacagttcattgttggaggtgccagcagaaca
gacatctgtcagggagacttaggagactgctggctgctcgctgccattgcttgtcttaca
ctgaacgataagctactgtatcgggttgttcctcaagagcagagtttttctgacaattat
gcaggaatctttcatttccagttctggcgttacggtgactgggtggatgttgttgttgat
gatcggatccctaccatcaataacgagctagtgttcaccaagtctgctgagaggaatgag
ttctggagcgttcttcttgagaaagcatatgccaaactgcacggttcctacgaggctctg
aaaggtggaaatactgctgaggggatggaagacttcactggaggagtgactgagttctat
gaaatgaaggaggcacctaaagaactttacaagattatgaagaaggccttagaccgaggc
tccctcatgggttgctctattgacgcgttggtcccagcacgtctggagactcgcactgcg
actgggctagtgaaaggtcatgcctactctgtaactgctgtgggtgagtgtaaacagagc
ataaaaaaaaaatctaaagtgcatctggtgcgtcttcgtaatccatggggccaagtggag
tggaacggaccttggagtgataactcaaaggagtgggaaagcatctctaaggaagataaa
gaaaaactgcatctacagaatgcagaagatggagagttctggatgtcttttgatgatttc
atgaaaaactacaccaagatagaaatctgtaatatgactcctgatgcactggatgatgat
aagctccacaagtggacagtgtctatgaatgagggtcgctgggtaagaggctgctctgct
ggaggctgcaggaattatttggacaccttctggacaaacccacagtaccgccttcgtctt
ctggaggaggatgatgaacaggacaacgatgaggtggcctgctcctttgtggtggctctc
atgcagaaaaacagaagaaaagaacgaaaaatgggtgccaatttattcactattggattt
tccatctatgaggtgccgaagcagatgcagggtaacaagcagcatatgcagaaggaattc
tttctactgaactcatccaaggctcgctgcaaggcctacattaacctgagggaggtgaca
caacgcttcaggctgagccctggggagtatgtcattgtgccttccacctatgagccccac
caggaaggcgagtttctcctccgtgtcttctctgaaaagaagaacgtctctgaagaaata
gagaacaggattgcagctgaccatccagtgccagctccagcctcagcaggggaagagact
gaggaggaccagcagttccgcaccatttttcagcagatagctggggatgaaatggagatc
tcggctaacaatctgagaaatgtcctgaacagagtgttggctgatcacagggacatgaat
aaagaggtgttcagtttagagagctgccgtagtatgatagccttcatggacatggctgga
acaggcagacttaatctacaagagtttaaacagttgtggaataagatcaaaaagtggcag
gaaacctttaagcattatgaagctgagcagactggcttcatcagcagctacgacatgagg
aacgccatcaatgatgctgggttccatctcaacaacccactgtacaacatcatcacaatg
cgttacgccaatgagaacatgaacatcgactttgacagctttgtcagctgtcttgttcgt
ttggaggggatgttcagagctttccaggcttttgatcaggatggagatggcactatcagc
ctgtctgtactggagtggctccagttgactctgtatgcctaa
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