Tachysurus fulvidraco (yellow catfish): 113659566
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Entry
113659566 CDS
T08119
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113659566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113659566
03021 Transcription machinery [BR:
tfd03021
]
113659566
03036 Chromosome and associated proteins [BR:
tfd03036
]
113659566
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
ARID
113659566
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113659566
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113659566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
113659566
NCBI-ProteinID:
XP_027028241
LinkDB
All DBs
Position
12:17861386..18069321
Genome browser
AA seq
2126 aa
AA seq
DB search
MAAQVASVPAASNNKTKTLPGVLGQDLNSGKRAGGIVDVRSNTNTNNNVDRRCDDLSRTG
GSVTTSVSSSSSSSSSSSSSSSMSSSSPGVETGFVANHKLKHAPGDVQFNQYQQHGNQRA
IQSNHGSQDGSDIQRLGGRDGGVGGSSEQHVLRKSIEDQPCRTVDNMNSSRYEQGNLAPS
LQASHAQGAGGGGGGGGGAGGKTPVSDFSHYFGSSRSGPCFDQHGAQQGFGTLMYPVTSN
HVEASPNSHEGHQKSQYSAYPGYGTAGYSNQGSSQAKCVPVGSMNNAAGFARFPGQSQHP
SGATPTLNQLLTSPGPMMRYYEYNSGKDASSQYGCGGSGWPGQRSNPGTANSAQSANRNQ
VGSMDFMVMKRSQMYGMSSSPYSQQQQGVPYPSQPYGSPSPHRYPMAMQGRGQMSMGTMP
YPQQQVPAHFGQQGMGGYCPQGQPGYYSQSQQSQQPQHQTPYSQPRHTTQQDTQESYGNR
SQPAGNAGKPNHDEMGLIQQDRPSSLPDLSGSIDDLPMGTEAPLNSAISVSGPSNSQGDQ
GNQIQSPFSLHTSPRVSSMRSGPSPPPIASPSATGSNQISPTNGPVPQLAPQNPGNITDS
GSNSSMNQIPMAHDRAFMRRSQNQYGPQQSGPPISPHLSSRNQMQHGMSIYQQNSTGSYG
PPSGPYGPQGNYSRLQYGGMNNTNCSSLGPSMSNSLGMNASSPMHGQGPGQPMSMGRTPG
PPGNRVYLSGGNSLAPTSPSMPQSAGPGMGPPAGNVNRKAMDGPMATVHPTGNSAQGRQG
GYCGMMGSGSSYSHQVGNATAMMSPQSCSSTTSPSGPMGESGDVAMPADSKQKSSSKEEV
IPVAEPHKLPKDGSSSQCGSEPPTPSALTPSPASLSSYHGDDSDSISSPAWPKTPSSPKS
GSGTTTNDKVSRLYEMGSEPERKNWVDRYLSFMEDRGTPVPHLPVVGKKQLDLCKFYMAV
KDLGGLAMVNKNKKWRELSSTLGLGTSSNAASSLKKHYIQYLFAYECKVERGEEPPPDSC
PSVDGKKQGKTEPPSPATSGSLQGPQTPQSTGSSSMPEMPSELKPPTPATTPQGHISIPG
NSNNSVSIQDPFSDSSDPAFQKRNILSSGNSYQSAMTPMDSMIRMQYENKDHFVGIRKVG
GDPCMPAQMTPAGMQDIYNRSPSSGTMAGLGMGQRSQYPYGPPYDRRSDHLMGMDGSMGP
HGNQGNMSHANSDGSMYSPNRYHNQQRHDNYGQQYPGMPYGVHPPGMYPQQGYKRPLDGM
YSPPAKRHEGEVYGMQYGGPQTDMYSQYGGNYPERRPMQTPFPYPYGRERLQNTSQGPQH
HPVQHSMMAAGHSVPTGDGPTHMWPSRTDMAYSYSNRHGTPSQSSPYPGMGRIDDMDGVR
ADNLWPGHQRQTPYISGHSNSMALLNSRPPSSYQTSNHISCEPGPGSFQRSMEVHMQPNK
MAFMQSMKLHKPGMSVPSGSGSGVPGQMPPNMRRDYPIGCVEGTQPLLKPRRKMTSKDTG
TPEAWRMMMSLKSGLLAESTWALDTINILLYDDSTVASFNLAQLPGFLELIIEYLRRCLI
EIFGILEEYEVGTQGQKTLLGPVKDEIEQDSLKSDNPCEPECSQEPEENFMDSPPRFSET
GPELIQEGQNKNEISKNERDEKDKEKTEDNIEPLEGHSSTVPEPRPKQASKYDKLPVKIV
QKDDFIKDISDELGHVQKFDSGLLHWKVGGGDSTSYILTHFESREGCTNNNVESKQHCCA
KKSEEVHNNQVATIDDVLSPRLRALSEEENSSTSPSSSLYSLRLFENQKGITVLEDEPHC
PDEPPLCTKSSWQDSLSKRCICISNIIRSLSFIPGNDTEMSKHPGLILILGRLLLLHHDH
PERKRIVPSYDKEEYHKEVDIKPCSRDEWWWDCLGALRENTMVTLANIAGQLDLSIYQES
ICLPILDGLLHWMVCPSAEAQDPFPSAGPHSQLSPRRLVLESLCKLSVQDGNVDLILATP
PFSRQEKFFATLVRQVGERKLQVYREMAVAVLSNLARGDSSAARCIAIQRNSVGNLVGFL
EDGIAMTQYHQNPHSLLHMGHPPMEQPSVSMMCRAAKALLELAKVEENRPEFVLYESRLL
DIAISSVLNVSVVAIICEVLFHLGKS
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcagtcccggcagcgtctaataacaagaccaagactttacct
ggtgttttgggacaagatctaaactccgggaaacgtgcaggaggaatagtggacgtgaga
agtaacactaatactaataataacgtggatcggcgttgtgatgacctgagccgaaccggt
ggaagcgtgacaacttcggtgtcctcctcatcctcatcctcatcctcttcatcctcatca
tcatcaatgtcatcgagctctcctggtgttgaaacgggttttgtggctaatcataaacta
aagcacgctccaggagatgttcagtttaatcagtatcagcagcacggcaatcagcgcgcc
atacagagtaaccacggaagccaagacggctccgacatccagaggttaggaggcagggac
ggtggtgtaggaggcagttctgaacaacacgtgttgagaaaaagtatagaagatcagcct
tgtagaaccgtagacaacatgaatagcagcaggtacgagcaaggcaacttggcaccgagt
ctccaagcctcccatgcccagggcgcaggaggaggaggtggtggtggtggtggtgctggt
gggaaaacaccggtctctgacttcagtcactattttggaagttcaagatcaggaccttgc
ttcgatcagcacggcgcacagcagggctttggtactttgatgtatcccgtcacttctaat
catgtggaagcctctccaaactcccacgaagggcatcaaaagagtcaatacagcgcgtat
ccgggctacgggactgcgggatacagtaaccagggctccagtcaagccaaatgcgtcccg
gttgggtccatgaacaacgccgcaggatttgcgcgtttccctggacagagtcagcatcct
tccggcgcgacgcccaccctgaatcagttgctcacttctccagggcccatgatgcgatac
tatgaatacaacagtggcaaagatgcgagctctcagtacgggtgtggaggctcagggtgg
cccggacagagaagtaatcccgggaccgccaacagcgcacaaagcgccaaccggaatcag
gtgggctctatggacttcatggtgatgaagcgctcacaaatgtatgggatgagcagcagt
ccatactctcagcagcagcagggtgtcccctatcccagtcagccgtacggatctccttct
ccacacagatacccgatggccatgcagggaaggggacagatgagcatgggcacgatgcca
tatcctcaacaacaggtaccggctcattttggccagcagggcatgggaggatattgtcct
cagggccagccggggtattacagccagtctcagcaatcccagcagcctcagcatcagaca
ccttacagccagcctcgtcataccacacagcaggacactcaagagagctatggaaacaga
agccaacctgctgggaatgctggaaaacccaaccacgatgagatgggattgattcagcag
gaccgtccttccagtctgccggacctgtcaggctccatcgatgatttgcccatgggaact
gaggctcctctcaactcagctatcagtgtctctggtccctccaatagtcagggagaccag
ggcaaccagattcagtccccgttttcactacacacctctcctcgtgtctccagcatgcga
tctggaccctcacctccacctatagcctcgcccagtgccactggctccaaccagatctcc
cctaccaatggcccagtaccccagctggcaccacagaaccctgggaatataactgactct
ggctccaactccagcatgaaccagattcccatggctcacgacagagctttcatgcggagg
agtcaaaaccagtatggtcctcagcagtccggaccgcccatctccccacatctgtcatcc
aggaaccagatgcagcatgggatgagcatctatcagcaaaactccactggttcctatgga
cctccgagcggtccctacggcccgcaaggtaactactcaagacttcaatatggaggaatg
aacaacactaactgcagcagtctggggcctagcatgagcaacagcctaggcatgaatgcc
agtagtcccatgcatggacaaggaccagggcagcccatgtccatgggccgtaccccagga
ccccctggcaatcgcgtctacctgagtggtgggaacagtctggcacccacttctcccagt
atgccacagtctgctggtccagggatgggacctcctgcaggaaatgtgaatcgtaaagct
atggatggtccaatggcaacagtacatccaacaggcaactctgcacagggcaggcagggt
ggttattgtggaatgatgggcagtggctcgtcgtacagtcaccaagtgggaaatgccaca
gcaatgatgtcaccacagagctgcagctccactacgtctccttcaggccccatgggggag
agtggagacgtggcgatgcctgcagactccaagcagaaatccagcagtaaagaagaagtg
attcctgttgctgaacctcacaaactcccaaaggatggctccagctctcagtgcggctca
gagccccccactccctcagctttgacccccagccctgctagtctgtcttcctatcatggg
gatgacagtgacagcatcagcagtcctgcatggcccaaaactccctccagtccaaagtca
ggctcaggcaccacaacgaacgacaaggtttctcggctgtacgaaatgggaagcgagcca
gagagaaagaactgggtggatcgttatctatccttcatggaggacagggggactccggtt
cctcacctccctgtagtggggaaaaaacagctggatctgtgcaagttctacatggctgta
aaggacctcggcggcttggccatggtaaataagaataagaaatggcgtgagctgtcctcc
acactcggcttaggaacgtccagtaacgccgcaagctctctgaagaagcactacatccag
tatctgtttgcctatgagtgtaaggtggagagaggcgaagagcctccacctgactcctgc
cctagtgttgacggcaagaaacaaggcaagactgagcctccgtctcctgccacctcaggc
tctctacagggtcctcaaaccccccagtcgacaggcagcagctccatgcctgagatgccc
agtgagctaaaaccgcccacgccagccaccacgccgcagggtcacatcagtatcccaggc
aacagcaataattcagtcagtatccaagacccgttctcagacagtagcgatcctgctttc
cagaaaaggaacatactgagttctggaaattcctaccagtcagccatgacccccatggat
tccatgatcaggatgcagtatgaaaataaggaccattttgtaggaataagaaaagtaggt
ggagatccatgtatgccagctcagatgactcctgctggcatgcaggacatctataacagg
agtccatcgagtggcacaatggcaggactgggtatgggacaacgttctcagtacccttat
ggaccaccatatgaccgcagatcagaccatttaatgggaatggatgggagtatgggtccc
catgggaatcaaggcaacatgagtcatgctaacagtgatggtagcatgtattctcctaac
agataccataatcaacaaagacatgacaactatggacagcagtatcctggtatgccatat
ggtgtccaccctccagggatgtaccctcaacagggctacaagcgacccctggatggaatg
tatagcccccccgctaagaggcatgaaggagaggtttatgggatgcagtacggaggccca
cagacagatatgtacagtcagtatggaggaaattatccagagcgccgacccatgcagact
ccctttccttatccgtatggccgggaacggctgcagaacaccagccaagggcctcagcat
catccagtccagcacagcatgatggctgctggacattcagtgcccacaggagatggtcca
acacacatgtggccctcaaggacagacatggcttattcttactctaatagacatggcaca
cctagtcagagctctccatacccagggatgggacgtatagatgacatggatggagtcagg
gcagacaatctgtggcctgggcatcagcgccaaacgccatacatatctggtcactctaac
tccatggctcttctgaattcacgacctccatcttcctaccagacctctaaccacatctcc
tgtgaaccgggcccagggtcttttcagcgttctatggaagtgcacatgcaacccaacaag
atggcatttatgcagtctatgaagttgcacaagccaggaatgtcggttccaagtggctct
gggagtggagttccaggtcagatgccacccaacatgaggagagactatccaatagggtgt
gtggaagggacccaaccactcttgaaacctcgacgcaaaatgacctcaaaagacactgga
accccagaagcctggcgaatgatgatgtcactcaagtcaggacttctggctgaaagcaca
tgggctctagatacaatcaacattcttctttatgatgacagcactgtagcatcattcaat
ctggctcagttgcctggattccttgagctgatcattgagtatttaagaagatgcttgatc
gagatctttggcatcttggaggaatatgaagtggggactcaaggccaaaagactctgctc
ggtccagttaaggatgaaattgagcaggactcgctcaaatcagacaatccctgtgagcca
gagtgcagccaagaaccagaggaaaacttcatggactctccacctaggttttctgagaca
ggcccggaattaattcaagaaggtcagaacaagaatgaaatatcaaaaaatgagagagat
gagaaagataaagagaaaactgaggataatatagagccccttgagggtcattcatcaaca
gtgcccgaaccgagacccaaacaggccagcaagtatgataaactgcctgtcaagattgtt
caaaaagatgacttcatcaaggatatttctgatgagcttggccatgtgcagaagttcgac
agtggactacttcactggaaagtaggtggaggggactccacaagctacatcctaacacat
tttgagagtcgtgaggggtgtaccaataataatgtcgagagcaaacaacactgttgtgct
aaaaaatcagaggaggtacataacaaccaagttgcaactatagatgatgtgctgtcccca
agattaagagctctctctgaggaagaaaactcgtcaacctcaccgagcagttctttatat
tcattacgcctttttgagaaccaaaaagggatcactgtactggaggatgaaccgcactgt
ccagatgaacctccactgtgcactaaatccagctggcaggactctttgtccaaacgttgc
atatgtatctctaatatcattcgcagcctgtcatttatccctggaaatgatactgagatg
tccaaacatcctggcctgattctgatccttggccgtttgctgctgttgcaccatgatcac
ccagagaggaagagaattgtccctagctatgacaaagaagagtatcacaaggaggtagat
atcaagccctgcagcagagatgagtggtggtgggactgtctgggggcgctgagggaaaac
actatggtcacgttggccaacattgctgggcagctagacctgtccatataccaagagagt
atatgtcttcccatccttgatggcttgctccattggatggtgtgtccttcagctgaggcc
caggacccttttccttcggcagggccacattcacagctcagccctagaaggttggtgttg
gaaagtttgtgcaaactcagcgttcaggacggcaacgtagacttgatcctggccacacca
ccctttagtcgtcaggagaagttttttgccacactggtgcgtcaggtgggagagcgcaaa
ctgcaagtttaccgcgagatggcagtggctgtgctgtccaacctggctagaggggattct
tcagcggcacgttgcatcgccattcagagaaacagtgttggcaaccttgtaggcttccta
gaggatggaattgccatgactcagtatcaccaaaacccacacagtctgctgcacatgggt
catcctcccatggagcaacccagtgtgagcatgatgtgtcgagctgccaaagcacttctg
gaactggccaaggtggaagagaacaggcctgagtttgtgctgtatgaaagcagactgctg
gatattgccatctcctccgtgcttaatgtaagtgtggtggccatcatctgtgaagtactc
tttcatctcggcaagtcatga
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integrated database retrieval system
