Tachysurus fulvidraco (yellow catfish): 113659682
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Entry
113659682 CDS
T08119
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113659682 (irf2bpl)
04121 Ubiquitin system [BR:
tfd04121
]
113659682 (irf2bpl)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
113659682 (irf2bpl)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Atypical E3
113659682 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
113659682
NCBI-ProteinID:
XP_027028430
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All DBs
Position
12:complement(13904424..13907321)
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AA seq
668 aa
AA seq
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MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRA
HGFQEGRSPGPAPPPTVKAQAAMAAKETVQLNHVDASSKQQQQQQQGLERYSLSTERSRF
DYSAIGAHAGRLPNGLGGPNGFPKSDDGPPELNRQSPNSRRSHGLVTVPGQMNVPPNLLP
QTMLNGPPSAAGIAQHSMAGRAPPTASMSTALSMASQAMSEQGKRPGSVSSTDQDRDLKE
KQRNAEALAELSESLRNRSEDWASKPKIVRETLITLSNSSPFDIRFKKDHSLSGRVFAFD
AVSKPGMDYELKIFVEYPSGSGNVFSSASGVAKQMYQDCMKDYGRGLSSGFKYLEYEKKH
GSGDWRLLGDLLPETVRFFKEGLGAEMLPQPYIDASCPLLPSALVNMPRAMPSASALRPG
MRKRKASPEPDSAEGALKISDEQQRQQWIASQSEALKLTMASGSFVASHGGPPPLGPVHS
SRATPPESAPQNGQSPMAALMSVADTLGNAHSPKDSNSVHSTTSTRHNSSSPVSPASVSG
QRRLASRNGDLNMAGTPSQSASHQNMEQAHPQNIPDSPMANNGPLCCTICHERLEDTHFV
QCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDV
KVKKERDP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtctcctcgtcgaggaggcagtcgtgttatctctgcgatttgccc
cgcatgccgtgggctatgatttgggattttaccgagccggtgtgcagagggtgcgtgaat
tacgaaggcgcggatcgcatcgagtttgtcatcgagaccgcgcggcaccttaagcgggct
catggcttccaagaggggagatccccgggacctgcgccgccgcccacggtgaaggcacag
gcggccatggcggccaaggagacggtgcagctgaaccatgtggacgcctcgtctaagcag
caacagcagcagcagcaagggctagagcgctactccctgagcactgagagatcgcgcttc
gattactccgccatcggcgctcacgccggacgcctcccgaacggactcggaggaccgaat
ggatttccgaaatcagatgacgggcctcccgagcttaaccgccagagcccaaattcccgc
cgaagccatggcctggtcacggtgcccggacagatgaacgtaccaccgaatctactaccg
cagaccatgctgaacggccctccatcagcagcgggcattgcgcagcacagcatggctggc
agagcccctccaacagccagcatgagcacagctttgtccatggcgtcgcaggcgatgtcg
gagcaaggtaaaagacccggttccgtgtccagtacggaccaagaccgcgatctaaaagag
aagcagcgcaacgcggaggctttggccgaacttagcgagagtttgcggaacagatctgag
gactgggcgagtaagcctaagatcgtaagggagacgttgattacactttcgaactcttcg
ccctttgatattaggttcaagaaagaccattcactttcgggcagagtgtttgctttcgac
gctgtgtctaagcccggtatggactacgagctgaaaatatttgttgaatacccaagtgga
tctggtaatgtgttctccagtgcgtcaggtgtggccaaacaaatgtatcaagactgcatg
aaagactatggcagggggctctcgtccgggtttaagtatctggaatatgagaagaagcac
ggttccggcgactggcgactattgggcgacttgctgcccgagactgtgaggttctttaag
gaaggacttggcgccgagatgctgccgcaaccctacatcgacgccagctgtccgctgttg
ccttcagcgctcgtgaacatgccgcgcgccatgccgtccgccagtgcgctcagaccgggc
atgcgcaagcgcaaagcgtcgcctgaaccagactcagccgagggagcgctcaagatcagc
gatgagcagcagaggcagcaatggattgccagccaaagcgaggcgctgaagctcaccatg
gcgtcaggctcgttcgtggcctcgcacggcggccctccgccccttgggcccgtgcactcg
agccgagccacgccgcccgaatcggctccgcagaacggacagtcccccatggccgcgctc
atgtctgtggcagacacactgggcaacgcgcactcccctaaagacagcaactccgttcac
tccaccacgtccaccagacacaacagcagcagtccggtatcgcccgcttccgtgtcggga
cagaggcgcttggcttcccgtaacggagacttaaacatggccgggacgccctcgcagtcc
gcatcccatcagaacatggagcaggcgcacccacagaacattcccgactcgcccatggcc
aacaacggaccgctgtgttgcaccatttgtcatgaacgcttagaagacacacacttcgtg
cagtgtccctctgttcctaatcacaagttctgcttcccatgttcacgcgagagcatcaaa
gcacagggggcaaccggcgaggtgtattgccccagcggagagaaatgccccctggtaggt
tcgaatgtgccttgggctttcatgcaaggcgagatcgcaaccattctggctggggacgtt
aaagtgaaaaaggaaagggacccctaa
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