Tachysurus fulvidraco (yellow catfish): 113659737
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Entry
113659737 CDS
T08119
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113659737 (rpap1)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113659737 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
DUF4519
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
113659737
NCBI-ProteinID:
XP_027028525
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All DBs
Position
12:complement(8954104..8971583)
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AA seq
1379 aa
AA seq
DB search
MLQRPKPTDSEVDLLQEQECFLASGSTPAATVTRRADKRRGDNASADSDDSPVNPRDVVT
IADLSDELPDLTPVPPKKTCSKKVRFENEDPEELLDRHDTHISAVLSKIVERDTSAVPVL
LPAFTNTAFPKVLHRSTVNKQETAPGGRKSIFARHIAAQKAKTGPGERNEAKIGNTQKSE
SRPVHGTAEGPLLVSGQGLGPGSTMETLKIHQENQARLQGMSQSEILEEQKLLLAQLDSR
LVDFVRSQKNQNASLTSIDKSACPVQSLTENKASAPHYSDTAQDSQEVAMDTDEEDETKP
ANHHPITAEQLPIQPEKEWLHMDKLEPEKLEWMRDLPAPRKQATKKDMQARFDFSGTLLP
PTEDLPTHLGLHHHGEEPELAGYSLQELFLLSRSQLTQQRSLALNTLAHILSKARAGEYS
SCLKGNVLTSLLDAGLLFLLRFSLDDSVESVMSAAVRALRALLVSTEDEENLDNLFSWML
GMAAFPLVPQLQKEDDEDDEGLIESKKETEKEKEERKLDHSVAQQDVLKGLLKMQLLQRM
RYILEVVQPSPQTVLAILEILIRIARHSVSAAAQILDCPRLMATVMANFLPCSWSVQTSS
TKPSLYGLPVSKAMKLLRVLGSTGRYTCARILNLCGKERLSRFLSVEPSELLLESEENIC
CSTEALRLWAVAASYGQGCSLYKDLYPVLVKALQAAHKPCAPSESLLVLERYRVKSLLVL
LTQVTHTAGCHQEIQSGLLSSQGAECLPPPPVMWSHVSGLQPTVMGILKGCMGKLDDPSH
RSSTLNLLPSFLIYMGAYYSQLRLQSSFQSVQCLEELEALSKEVLLPLVSTQVFHCMIDS
LRSSSVTCQPGMSTSDQNVPSLPGLGGNRFTSLLGPESPLPLCTALFYLLDIIVTIHRGL
TKSFSSLILSDSILTYLKACVGATPSVSHTSAWILRHEHHLLYRILRLAHRLVSAHPEVK
KHASLFHQVSLALISWLLPGSEYLAHELLSTMIFNHDLFPEAGSGGPEAVTLAELHLQET
SSHSPSPGPLLREALAQLPSIRACYLTQLAYMEPAVITSRERHLGRNPWLSSQLLPELSG
PSLPSDWAFLPLISLYERVGVSHGGGLRAESLPPGSVQSLTYCLQWLLVLENFRERALQL
VPPVAKLARLACVFLCSSDIFLERPVKEFTWALLHGMTRPGRLEALDLSLPPPGLASFHD
LYSALLAQYEAVSFGDSLFGCFILLPLQRRYSVSMRLAVFGEHVSILRSLGVSLEQLPVA
LEKFTSPAENSLPLLRLYFRALVTKALRRDWCPVLYAVAVAHLNAFIFSQEAAPQEVETA
RRSLLRKTYYLTDEVLRSHLLLFRQPQQHSELGFSTYEQLTSIRAGRLQSVIKAKEGND
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagcgtcccaagcccacagactcagaggtggacttgctccaggagcaggagtgt
tttctagcctctggcagcacaccggcggccaccgtgacgcggagggcagacaagcgtaga
ggggacaatgcttcagcagacagtgatgattctcctgtgaatccaagagatgttgtgacg
atagcagatctttctgacgagctgcctgacttgactcctgtgccacccaagaagacttgt
tccaaaaaagtgaggtttgagaatgaagatccagaggaacttctggacaggcatgacact
cacatcagtgccgttctctcaaagattgttgaaagagacactagtgctgttcctgtgtta
ctcccagccttcacaaacacagctttccccaaagtcctacatcgctctacagtcaataag
caggaaacagcacccggaggtcggaaaagtatttttgcgcgacatattgctgcacagaag
gctaaaacaggacctggagagaggaacgaggcaaaaatcggcaacacacagaaatctgaa
tccagacctgttcatggcactgctgagggtcccttactggtgtcaggtcagggccttggt
ccaggcagcaccatggaaacactaaagatccaccaggagaaccaagccaggctccaagga
atgtcccagagtgagatattggaggagcagaaattgctgttggcccaactagattcaaga
ttggtggactttgtaaggtcacagaaaaatcagaacgcctcattgacttctatcgataaa
tcagcgtgtcctgtccagtctttaaccgagaacaaagcttcagcacctcactattcagac
acagcacaggactcgcaggaggtggcaatggatactgatgaagaggatgaaactaaacct
gctaatcatcatccaatcactgcggaacagcttccgatccagcctgagaaagagtggcta
cacatggacaaactggaaccggagaaactggagtggatgagagatttgcccgcccctaga
aagcaggccaccaaaaaggacatgcaggcacgcttcgacttttctggcacccttcttccc
cccacagaagacttacccactcatcttggccttcatcatcatggggaggagccagagttg
gcaggctactcattgcaggagctttttctcctttcccgcagtcagctgacccagcagagg
agtctggctctgaacactttggcccacatcctgtcaaaggctcgtgctggggagtactcg
tcatgcctaaaaggcaatgtgctgacctccttgctcgatgctggacttctctttctgttg
cgattctcgctggatgacagcgttgagagtgtaatgtctgcagctgtgcgtgccctgcga
gcgttgctagtttccactgaagatgaggagaatctggacaatctgttttcctggatgcta
gggatggcagctttccccttggttcctcagcttcaaaaagaggatgatgaagacgacgaa
ggtctgattgagtctaaaaaggaaaccgagaaagagaaagaagagagaaaattagatcac
agtgtcgctcaacaggatgttctcaagggattgttgaagatgcagctcctgcagcgaatg
cgctatattctcgaggtggtacaaccttcaccccaaacagttctcgctattctggagatt
ctgatccgaatcgctcgacattccgtctctgcagctgcacagatccttgattgcccccgg
ctaatggcgaccgtgatggcaaatttcctgccttgctcatggagcgtacagacgtcatca
accaaaccttctttatatgggttgcctgtttctaaggcaatgaagctcctgcgagtgttg
ggaagcaccggcaggtacacctgtgcgagaatactcaatctatgtggaaaggagcgtctg
tctcggtttttgtcagtggaaccttcagagcttttgttggagtctgaggaaaatatctgc
tgtagcaccgaggctctgaggctttgggctgtggctgcaagctatggccagggttgtagc
ctatacaaagacctgtacccggtgttggtgaaggctttgcaggctgcacataagccttgt
gctccctctgagtctctgttggtcctggagcgctacagagtcaagtccctgctcgtgttg
ctcactcaggtcacacacactgctggctgccaccaggagatacaaagtggactgctgagc
tctcagggagctgagtgtctccccccacccccagtgatgtggagtcatgtgtctgggctg
cagcccactgtgatgggcatactgaaaggctgcatgggaaagctggatgacccaagccat
cggtcaagcaccctaaacctcctgccatctttcctaatctacatgggagcatattactct
cagctcagactgcagagttcattccagtcggtgcagtgcctggaggaactagaggccttg
tctaaagaggtgctcctgcctctcgtgtctactcaggtctttcactgcatgatagacagc
ctcaggtccagttcagtaacatgtcagcctggtatgagcacttcagaccagaatgttccc
agtctgccagggttgggcggcaacaggtttaccagcctgttaggacctgaatctcctctc
cctctctgcactgcactcttctacctcctggacatcatcgtgaccatccatcgaggctta
actaagagtttcagctctctcatcctctcggactccattctgacctacctgaaggcttgt
gttggagcaacaccctcagtgtctcataccagcgcctggattttgcgccatgagcaccac
cttctctatcggatactccgactggctcacaggctggtttctgctcatccagaggtgaag
aaacatgcttcactttttcaccaagtttccttggctctgatctcctggctgttgcctgga
agcgaatatctggcacatgaacttttgtctactatgatcttcaatcacgatctctttcct
gaggctggtagtggaggtccagaagcagtgaccctggcagagctgcatcttcaggagacg
tctagtcattcacccagccctggtcccctcctccgtgaagccctagcccagcttccctca
atccgtgcctgctacctcacccagcttgcctacatggagcctgctgtgatcacgtcccgt
gagcggcaccttggtcgtaacccttggctttcttctcagctcctccctgaactctcaggc
ccctcactgccttctgattgggcctttctgcctctcatcagcctttacgagcgtgtagga
gtgtctcacggcggtgggctaagggccgaatcgctacctcctggctcagtgcagtcactt
acgtattgcctgcagtggcttcttgtactcgagaactttagggagcgagcgctgcagctg
gtgccacctgtggccaaactggcacgtctggcctgcgtcttcctgtgctctagtgatatc
tttctggagagaccagtgaaggagttcacatgggcgctcctgcatgggatgactagaccc
ggacgtttagaagctctggacctgagtttaccgcctccaggtttagcctccttccatgac
ctctactccgcactgctggctcagtatgaggccgtgtccttcggcgactcgctctttggc
tgcttcatactgttgccacttcagagacggtacagcgtgtctatgagactggccgtgttt
ggcgagcatgtctccattctgcgctcactcggggtctcgctggagcagctacctgttgct
ctggagaaatttacttcccctgctgagaattcgctgcctttgctgcggctgtatttccga
gctctggtgacaaaagctctgaggagggattggtgccctgtactgtacgctgtcgctgtc
gcccatctcaatgcttttattttctcccaagaagctgctccacaggaagtagagactgct
cgccggagtctgctgagaaagacatactacctgacagacgaggtgttgaggagccacctg
ctgcttttccgtcaaccccagcaacacagtgagctgggcttcagcacatacgagcagctg
acgtccattcgtgccggcaggctccagagcgtgataaaagccaaggaaggaaatgactaa
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