KEGG   Tachysurus fulvidraco (yellow catfish): 113659741
Entry
113659741         CDS       T08119                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113659741 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tfd03041]
    113659741 (cdc5l)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113659741 (cdc5l)
Spliceosome [BR:tfd03041]
 Complex B
  Other components
   Prp19 complex
    113659741 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    113659741 (cdc5l)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    113659741 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 113659741
NCBI-ProteinID: XP_027028530
LinkDB
Position
12:complement(14822012..14832531)
AA seq 807 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEDTNDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEVPFEKKPAPGFYDTSMEQYDPHEPDFK
RLRQQHLDGELRNEKEERERKKDKQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNSMALRTPQTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGS
EGLTPHSGMTPKPSIGVTPGRTPLRDKLNINAEDGVVDYTDPSYAKHLQRESREQLKLGL
LSLPLPKNDFEIVLPENAEREMEEPEVDESFVEDAADIELRKQVAREAEREKELRQRHTA
VQRSLPRPSEVNETILRPQNVEPPLTEVQQAEELIKKEMITMIHHDSLHHPYTDMLAKKA
KGAGSGSTNAEHVSYLEKTPYEKVAEEDLKKAKEILRQEMEVVKHGMGHGDLSIDAYNQV
WEECYSQVLYLPGQNRYTRANLASKKDRIESLEKKLEINRGHMTTEAKRAAKMEKKMKVL
LGGYQSRAMGLIKQLSDLWDQVEQAHMELHTFQELKKQEDLAIPRRQEALREDVQRQQER
EKELQQRFADLLLEKETLHQRSSSEKF
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgattaaaggtggtgtttggcgcaacaccgaggatgagattcttaaa
gcagctgtgatgaaatatggcaaaaatcagtggtctcgtattgcatctctgctgcacaga
aagtcagctaaacaatgtaaagctagatggtatgaatggctggatcccagcattaagaaa
acagaatggtcacgtgaagaagaggagaagctccttcatttggccaaactgatgcccacc
caatggagaacaatagctcccatcatcggcagaactgcagcacagtgcctagagcactat
gagtatcttctagacaaagctgcccaaagagacaatgaagaagacacaaacgatgatcct
cgcaaacttaagccaggagagattgacccaaaccctgaaacaaaaccagccaggccagac
cctgtggacatggatgaagatgagttggagatgctgtctgaggccagagcaaggttagca
aacacacaaggaaaaaaggccaagcggaaagccagggagaagcagctagaggaggcgagg
cgcttggcagccctgcagaagcgcagagagttgcgtgctgcaggcatagatattcagaag
aagcgcaagaaaaaacgaggtgtagactacaatgcagaggttccctttgaaaaaaagcct
gctccaggattttacgatacttctatggaacagtacgatccacacgagcctgacttcaaa
agacttcgccagcagcatcttgacggagagctgagaaatgaaaaagaagagcgtgagcgt
aaaaaggacaaacagaagatcaagaagaagaaagagtcagacctcccatctgccattttg
cagactagtggggtgtccgagttcaccaaaaagaggagcaagctagtgctgcctgcacca
cagatatcagatgctgaactagaggaggtggtgaaactcggtcaggccagtgaaattgct
cgccagaccgctgaggagtctggaatcacaaactctgcttccagtgctttgctttctgag
tacaatgtcaccaataacagcatggcccttcgcacaccccagactcctgcagcacaggac
aagatcctacaggaagcccaaaatctgatggcacttactaatgtggacactcctctgaag
ggtggtctaaacacacctttgcatgagagtgacttctctggggtcaccccacagaggcag
gtggtccagactcccaacactgtgctctctacacccttcagaacaccaagtcatggttca
gagggtttgacgcctcacagtggcatgaccccaaagccttcaataggagtgacccctggt
cgcacgcccctgcgggacaagctcaacatcaacgctgaggatggtgtagtggattacaca
gatccatcttatgccaaacacctgcaacgagagtctcgcgagcagctgaagttggggcta
ttgtctcttccacttcccaagaacgactttgagattgtgttgcctgagaacgctgagagg
gagatggaagagccagaggtcgacgagagctttgtggaggacgcagctgatattgagcta
cgtaaacaggtagcaagagaagctgagcgtgagaaagagctgagacagagacacacagca
gtccagaggagtttacctaggccctccgaggtaaatgagaccattctgaggcctcagaat
gtggagcctcctctcacagaggtgcagcaggcagaagagctcataaagaaagagatgatc
accatgatccaccatgacagcctgcaccacccatacacagacatgctggctaagaaagct
aaaggagcaggctcgggttctaccaatgctgagcacgttagttacctggagaaaacaccg
tacgaaaaagtggcagaagaggacctcaaaaaggcaaaagagatactgaggcaggagatg
gaggttgtgaagcatggcatgggacatggcgatctttccatcgacgcttataaccaagtt
tgggaggagtgttacagccaggttctgtacctgcctggacagaaccgatacaccagagcc
aatctggccagcaaaaaggacaggattgagtctctggaaaagaaattggagattaacaga
gggcacatgacaaccgaggctaagcgggcagctaagatggagaagaagatgaaggttctt
ttaggaggctatcagtctcgggccatgggtttgataaagcagctcagtgacctgtgggat
caggtggagcaggcccacatggagttgcacaccttccaggagctgaagaagcaggaggat
ctggccatcccacgcagacaggaggctctgagagaagatgtgcaaaggcaacaggaaaga
gagaaggagctccagcaaaggtttgctgatcttctccttgagaaggaaactttgcatcag
agaagttcttcagagaagttctga

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