Tachysurus fulvidraco (yellow catfish): 113659878
Help
Entry
113659878 CDS
T08119
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tfd01001
]
113659878 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113659878 (prpf4bb)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113659878 (prpf4bb)
Protein kinases [BR:
tfd01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
113659878 (prpf4bb)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113659878 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pox_ser-thr_kin
ABC1
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
113659878
NCBI-ProteinID:
XP_027028741
LinkDB
All DBs
Position
25:9443322..9452892
Genome browser
AA seq
1022 aa
AA seq
DB search
MADLEMDLQRYGLNNGKEDLECPQRSGNENSEMSEEDGGEEEGAEVNGVNLDETSKHRNS
KHKKKKHKHRSKHKKHKHTSEEQKAHRRKHKHKHKKHRRKEGILPSLGTIDKKADEAFPY
SENQNVDDRALLEDLEKQRALIKAELDSQLIEGKVQSGMGLILQGYNSGSEEDAEGRRPP
NGDQCLKRSGGKTRPPKEHSDMGGKTRHNSPDIKTNTKHHSQSRERDRMARDSRGSRLSY
GGKETAKECSRSKGRKSSQSQNRSHDGVKKSLSPSSSRRSSERKNDQKGCSTEGKEAKID
SHSSHAEERRATQEQDKQRSGSPAHSSNQRSHSKDGHTEADRDKRPCKSPSKDASSGKEN
HSPCHRRASSPRHCRSSSIHQRERQFHQAASSGSKHSYSPSRNRSPARRGHSHSADRRRD
SPSRKRSRVDGAGRLYEISPARRRVSRSPLRRKSLSPRRQTRPSPRRRSRSPFRRRSGER
DRFSRTRVRRSTSRERERRRRWSRAEDKYKGSLSEGMKLDQESSSDDLMEDFDAEEEDEE
ALIEKRRQQRLAIMQKYRTLNEDSNMGSMASEPSSPQSSIRSRSASPDDILERAAADVKE
YELENVNTFEANVKAKHNLIAQEKESENLLLHSREGINMKKSSAPDMFIESDDMFAADFD
SARLRAFGVGKDFKENPNLRDNWTDAEGYYRVNIGETLEKRYDVYGYTGQGVFSNVVRAR
DVARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCL
VFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNE
SKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKLYDYAIDMWSVGCTLYELYTG
KILFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTV
MSTINPTKDLLADLVGVQRLPEEQRKKVMQLKDLIDGTLMLDPAKRISINQALQHSFIQD
KI
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttggaaatggacttacaaaggtatgggctgaataatggtaaagaagatttg
gagtgtcctcagaggagtggaaatgaaaacagcgaaatgtctgaagaagacgggggtgag
gaggagggtgcagaggtaaatggagtgaacctggatgaaacttccaaacatcgcaacagc
aaacacaagaaaaagaaacacaagcaccgcagcaagcacaaaaagcataaacacacatca
gaggagcagaaggcacacaggcgcaaacacaagcataaacataagaagcacaggcgcaaa
gaggggatattgccatccttgggaaccattgacaagaaggctgatgaagcattcccttat
tctgagaatcagaatgtggatgaccgggctctgttggaggacttggagaagcagagagct
ttgatcaaagctgagctggatagccagctgattgaaggtaaggtgcagtctggaatgggc
ctaatcctgcagggctataactcaggctctgaggaggatgcagagggacggagaccccct
aatggagaccagtgcctgaaaagaagtgggggtaaaacacgcccaccaaaggagcatagt
gatatgggtggcaaaaccagacataactcaccagatattaaaaccaacacaaaacaccac
agccaatctagggagagagacagaatggcaagggacagcagaggcagccgactgagttat
ggtgggaaagagacagccaaggaatgcagcagatccaaaggtaggaagagttcacagagc
cagaaccgatctcatgatggagtaaagaaatcactgtctccatccagcagcaggcgctca
tcagaaagaaaaaacgatcaaaagggctgctcaacagagggaaaggaggctaaaatagac
agccactcttcacatgcagaggaaagaagggctactcaagagcaggacaagcagcgatca
ggttcaccagcacactcaagcaatcagaggtctcattccaaagatggccacactgaggca
gacagagacaagaggccctgcaaatcgccatccaaagatgcctcgtcaggaaaggagaac
cactcaccgtgtcacaggcgggcatcaagtccacggcactgccgtagttcttccatccac
cagagggagcgccagttccatcaggcagcgtcgtcaggatccaaacatagctattctcct
tccaggaaccggtcccctgcaaggaggggccacagccactcagctgatcgtagaagagat
tcgccatctaggaagcgctcccgtgtagatggggctggaaggttatatgagattagccca
gcaagacggagagtcagccgctctccactcagacgaaagtctttgtccccacgacgacag
acacgcccctcacctagaaggcggagtcgatcgccttttaggcgaaggtctggtgagaga
gatcgatttagccgcaccagggttcgccgctccacatccagagaacgtgagcgcagaagg
aggtggagccgagccgaggacaagtacaaggggagtctgtcagagggcatgaagttggat
caggagtcgtcctctgacgatttaatggaagattttgatgctgaagaggaggatgaggag
gctctgattgaaaagcggcggcagcagcgactggctataatgcagaaatacaggacatta
aacgaagacagcaacatgggctcaatggcttcagagccaagcagtccccagagtagcata
cgcagtcgctctgcctcaccagacgacatcctggagcgtgctgctgctgatgttaaggag
tatgagcttgaaaatgtgaacaccttcgaggccaatgtgaaggccaagcacaacctcatt
gcccaagagaaagagagtgagaatttgttacttcacagcagagaaggaatcaacatgaag
aaatcctctgcccctgacatgtttatagaatctgatgacatgtttgctgcagattttgat
agtgccaggcttagggcttttggagttggcaaagactttaaggaaaatccaaatctcaga
gacaactggactgatgctgaaggatactatcgtgtgaacattggtgagacactggagaag
cgctatgatgtctatggttacacagggcagggagtattcagcaatgttgtccgggccaga
gacgttgctcgtgctggccaagaggtggcagtcaagatcatccgcaacaacgagctcatg
caaaagacaggactgaaggagttggagtttctgaagaagcttaatgatgctgatccagat
gataaattccattgcttgcgcctcttcagacatttctaccacaagcagcacttgtgtctg
gtgtttgagcctcttagtatgaatcttcgtgaggtcttaaagaagtatggtaaagatgta
ggccttcacattaaagcagttcgctcgtacagccagcagctctttctggccttaaagctt
ctgaagcgctgtaatattctgcatgctgacatcaaacctgacaacatattggtaaacgaa
tcaaagaccattctcaaattgtgtgattttggatcagcctcacatgtggctgataatgac
attacaccttacctggttagcaggttctacagagcacctgagatcatcatcgggaagctg
tacgattatgcaattgatatgtggtcagtaggttgcactctgtatgagctttatacaggg
aagatcttgtttcctggctcttccaacaaccatatgatcaaactggcaatggatcttaaa
ggaaagatgcccaacaagatgattcggaaaggtttgtttaaagaccaacacttcgaccag
aacctaaactttctgtacatagaagtcgataaagtgactgaaagggagaaagtgacagtg
atgagtactattaaccccactaaagacttgctggcggacctggttggtgtccagagactc
ccagaagagcagaggaaaaaagtgatgcagctgaaggatctgatcgatggcaccctgatg
ttggacccagctaaacgcatcagtataaatcaagccctgcagcattcatttattcaagac
aagatctga
DBGET
integrated database retrieval system
