Tachysurus fulvidraco (yellow catfish): 113659882
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Entry
113659882 CDS
T08119
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113659882 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113659882 (lamb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMB1
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
113659882
NCBI-ProteinID:
XP_027028743
LinkDB
All DBs
Position
10:complement(8587267..8603965)
Genome browser
AA seq
1876 aa
AA seq
DB search
MNIITFLQRICSILYPMIFTAKATMWESWMSAVLLFFLVEPAHLQRECEGSSCHPTLGDL
MVGRAAQLSASSTCGLNGPQNYCILGYLEDEQKCFTCDSRSPYNRYNNRNSHRIENIITT
FEPERKMKWWQSVNNVHQVSIQLDLETMFQFSHLVMTFKSFRPAAMLVEKSKDFGHTWKV
LRYFSADCASDFPRISAGPAETIDDLICESRYSGAEPSTDGEVVLKALDPHFHIENPFDP
TIQELITMTNLRVNFTRLLTLGDDLLGRKRRNPQDKYYYALYEMVVRGSCFCNGHASQCM
PVYNPRGDTFNEPGMVHGKCVCQHNTMGSNCEKCQDFYNDAPWRPAGSIDPHVCRKCNCN
GHSERCHFDLQRYISTGQISGGVCDDCRNNRMGAQCELCKQHYYKDPLRSLNDPYACIPC
VCNSAGSVEGGLCDPVSGQCVCKQNVKGERCDRCKIGFFRLSQEDPGGCQRCMCNFLGTI
STSPCDQNTGQCICDHFAQGPECDQCVPGYWGLGNTVYDCQPCDCDIGGAFSTLCSSENG
QCQCRANMVGPRCSEPAPGYFLAPLDFYLYEAEKAAPLDTKCFSDLVEPNTPLYPATSPP
PRYCPPGTIASEPTPQPYYRPEPTPQPYYRPEPTPQPYDPNLPGPPTYENTWPPTAYQTF
PPAVTLPSCVNYFKSKGYDVEFRDGRFVVVKRESRRKRRQGQSTIPLQPGSLHQVILRPH
TPDKPITWTGPGVVRVQDGAGLRFIVTNIPLTLNYHLVIRYEAQSTDDWTAIVKIVPLGS
IHENCPYDPSEKTFTLSSTSRMAILDPSVCLSAGVRYYVDITFENPDPYCSSHILIDTMG
LIPKMESLPNFCSDASLAQYQKYRCVELGAQAGENTLPEVCEKLVASMSAYIHNGAIPCR
CNPVGSFSLSCSKFTGQCDCKPNVVGRCCNTCTPLTYGFGQNGCSPCNCEPSGSKAEFCD
HKTGQCQCHNGITGRRCDRCISGYYGFPNCRRCQCNGLSDLCDHITGVCLNCRGHSTGPH
CERCDEGYFGDPVVRETCQPCLCPDVKGSGRFFAHSCGKDPNSLTPNCQCKTGHQGPHCD
KCAPGYYGNLLLPGSTCKECPCNNNIDPDDGEACDALTGNCLRCLHNTFGPQCQTCKQGY
YGNALLQDCRECSCDQQGTDMTKCLLGSPCICDEVTGQCPCRHGVVGIRCDRCEDEYWNL
SGQSGCQPCNCHPSRSFSNQCDKVTGQCPCETGYGGKQCQECAANHFGNADIQCISCDCD
MQGSVFPGCDPDTGECLCRPGVRGNFCEMCAPGYDPVFPACEPCHPCYHQWGENVTDISK
AMENMQSLISKYGGNLLPSDKRHQEKIQKLNESFMSLVSMLGSDQVNLGSLQNFLNQIRN
LAETTDPNIIIIDPTKLLETEIDNIYHEFKRLLDDLHKKMKDTHKIDLKEINDTLEKIRK
LHTDLQKDEERVKKARNKIDTSRQIRQDTKKELAKCQLRPLDVLEKKVKGLSVAKLNEEI
CGAPGDAECEKAACGGALCGKCGGPSCTGSLPIALNATDTAKKIKAGIQSLLQNLTEAET
KIKDIENLNKDVKTKAQNMMNKIDKTKSKYEKTKNDTKKLIESVREYLSEESMEPEDIDK
VASAVLAINLPSSPDEIKRMIQDIQKMMENFTHITEDLKDLEDQAKLARDLKNKADEILN
RTKETDVSDIEKTLNDTSQLHDKIKQKLNDTEDNRNVTDKLLDQSEKKLTNAEKNLNKPL
AKRLKNEIEALKNKTEMNRAQALEAKAVADAALSNVTDANKDLEEIEDKLKKLKNNTQAL
NDTITEHLKNITMEAKNMAKDVEAKMKQIEDLEKRIQNAVQDKINKMKELEDLLAEAMSL
KEYIAEKVVNYTQCGT
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattacatttctgcaaaggatttgttctattttatatcccatgattttcaca
gctaaagcaacaatgtgggaaagttggatgtctgcagtgctgctcttttttctggtggag
ccagctcacctacagcgagaatgtgaggggagctcgtgccaccccacactaggtgatctt
atggtgggccgtgctgctcaactctctgcttcatccacctgtggcctaaatgggccccag
aactactgcattctgggttaccttgaggatgaacagaaatgcttcacctgtgactctcgg
agcccctacaatcgatacaacaatcgtaatagccatcggatagaaaatatcataaccacc
tttgagccagagcgtaagatgaaatggtggcagtctgtaaacaatgtgcatcaagtcagc
attcaactagacttggagactatgtttcagtttagccatttagttatgacattcaagagt
ttcagacctgctgcaatgctggtagagaagtcaaaggattttggtcatacttggaaggtg
ttgaggtatttctctgcagactgtgctagcgacttccccagaatctcagcaggaccagca
gaaactatagatgacctcatctgtgaaagccgctactctggagccgagccttctactgat
ggcgaggtggtgttaaaagctttggacccccactttcatattgaaaatccatttgaccct
accattcaagaactcatcaccatgactaatctgcgagtgaactttacacgtttactcaca
ctgggtgatgacttgttggggcggaagaggaggaacccacaggacaaatactactatgcc
ctctatgagatggtggtcagagggagctgcttctgcaatggccatgccagccagtgtatg
ccagtttataacccacgtggagataccttcaatgaacctggcatggttcatgggaaatgt
gtttgtcaacataacactatggggagcaactgtgagaagtgccaggacttttacaatgat
gccccctggaggccagctggaagcattgacccacatgtctgcagaaagtgcaactgcaat
ggacactctgagcgatgtcactttgacctacagcgctacataagcactgggcagatcagt
ggaggtgtgtgtgacgactgcagaaacaaccgcatgggcgctcagtgtgaactgtgcaag
caacactactacaaggacccgctgcgctctctaaatgacccttatgcttgcataccttgc
gtctgcaactctgcagggtctgtggagggtgggttgtgtgatccagtgagtggtcagtgt
gtgtgtaagcagaatgtaaagggagagcgctgtgaccggtgcaagattggattctttaga
ctcagccaggaagaccctggaggctgccagagatgtatgtgtaacttcttgggcactata
agcacctccccatgtgaccagaacacaggccagtgcatttgtgatcactttgctcaggga
ccagagtgtgatcagtgtgtgccaggatactggggactaggaaatacagtctatgattgt
caaccttgtgactgtgacataggaggagccttcagtactctgtgttcttcagagaatggc
caatgtcagtgcagagccaatatggtgggacctcgctgtagtgaacctgctcctggttac
ttcttggcccctctcgatttctacctctatgaggcagaaaaggctgctcctcttgacacc
aagtgcttctctgacctggtagaacctaatacacccctgtatcctgctacatctcctcca
ccacgatactgtcccccaggaaccatagcttctgagcctacaccacagccttattaccga
cctgagcctacaccacagccttattaccgacctgagcctacaccacagccttatgacccc
aacctacctgggcctcctacatatgagaatacttggcctcctacagcatatcagactttc
cctcctgctgtcactctgcctagctgtgtgaactacttcaaaagcaaaggctatgatgtt
gagttcagggatggcagatttgtggttgttaagcgtgaaagccgtcgaaaacgaagacaa
ggccagagcaccattcccctgcagccaggatccctccatcaggtcatcctacgaccacat
actccagataaacctattacttggactggaccaggagttgtgcgggttcaagatggagca
ggactccgatttattgtcaccaacatccctttaactcttaactatcatcttgttattcgc
tatgaggcacagtccacagatgattggacagccattgtaaaaattgtgccattaggatct
attcatgaaaattgtccatatgatccatccgagaaaacctttacgctttctagcaccagc
aggatggctatcttggatccttctgtgtgcctcagcgctggcgtcaggtactatgtggat
atcacatttgaaaatcctgacccttactgcagctcacatattctaatagatacaatggga
cttattccaaaaatggagtctttgccaaatttctgctctgatgcatccctggctcaatac
cagaagtatcgctgtgtggagctcggtgcacaggcaggagaaaatactctgcctgaggtg
tgtgaaaaactggttgccagcatgtcagcatacatccataatggtgcaataccatgtaga
tgtaatcctgtggggtcattcagcttatcctgcagtaaatttacaggacaatgtgactgc
aaacccaacgtggttggccgctgctgcaacacctgcacccctttgacctatgggtttgga
caaaatggatgctcaccatgtaactgcgagccctcgggttccaaagctgagttctgtgac
cataaaaccggacagtgccaatgccataatggaatcacaggccgacgatgtgatagatgc
atttccggatattatggttttcctaactgcagacgttgccagtgtaacgggctgtctgac
ctctgtgaccacattactggagtctgtctaaactgcagggggcattcaactgggccccac
tgtgaaaggtgtgatgaaggttactttggagatcctgttgtaagagaaacctgtcagcca
tgcctgtgtccagacgtgaaaggcagtggtcgtttctttgctcattcctgtggaaaggac
ccaaattctctaaccccaaactgtcaatgcaaaactgggcatcaaggcccacactgtgat
aaatgtgcacctggttactacggtaacctcctattgccaggctctacatgcaaagagtgt
ccctgcaacaacaacatcgatcccgatgatggcgaggcgtgtgatgctttaactggcaat
tgtctccgctgcttgcataacacttttgggcctcagtgccagacctgtaaacaaggatac
tacggcaatgcactgctccaggactgcagagaatgctcatgtgaccaacagggcacagac
atgactaaatgcttacttggcagcccctgcatatgtgatgaggtgactgggcaatgccca
tgccgtcatggagtggtaggcattcggtgtgatcgttgtgaggatgaatactggaatctg
agtggacagtctgggtgtcagccctgtaactgtcacccgagccgatctttcagcaatcag
tgtgacaaggttactggccagtgcccttgtgaaacagggtatggtgggaaacagtgccag
gagtgtgcagctaatcattttggaaatgctgatattcaatgcatatcttgcgactgtgac
atgcagggctctgtcttcccaggctgtgatcctgacacaggtgagtgtctgtgtcggcct
ggagtgcgtggcaatttctgtgaaatgtgtgctccagggtatgatccggtcttcccagcc
tgcgagccctgccacccttgttaccatcaatggggagaaaatgtcacagacatttcaaag
gctatggaaaacatgcagtctctgatttccaaatatggaggaaatctgttacccagtgac
aagcgacaccaggaaaagatacaaaagttgaatgagtccttcatgagcctggttagcatg
ctaggctcagaccaggttaatttggggagcctacagaatttcctgaatcaaataaggaac
ttagcagaaaccacagatccaaatattattattatcgatccaactaagctgctggaaact
gaaattgataacatttatcatgagttcaagaggttactggatgatctgcataagaaaatg
aaagacactcacaaaatagatttaaaagagataaatgacacactggagaagatccgtaag
ctccatactgacttacagaaagatgaagaaagggtgaagaaggcaagaaataagatagac
acttccaggcagatccgacaggacacaaaaaaagagctggccaaatgccagctgaggccg
ttggatgtactggagaagaaggttaaagggcttagtgtggccaaacttaatgaggagatt
tgtggagcaccaggtgatgcagagtgtgaaaaggctgcgtgtggtggtgctctgtgtgga
aagtgtggtgggccatcttgtacaggaagcctacctatcgcccttaacgccacagacaca
gcaaagaagatcaaagcaggcattcaaagtctgctccaaaatctcacagaggcagaaaca
aagataaaagacatcgaaaatctgaataaagatgtgaaaaccaaggcacagaacatgatg
aataaaatcgacaagactaagagcaagtatgaaaagaccaagaatgacactaaaaaactt
atagagagtgtcagggagtacctcagtgaagagtcaatggaaccggaagacattgacaag
gtagcatctgccgtgttggctattaatcttccaagttctccagatgagatcaagaggatg
attcaggatattcagaagatgatggagaacttcacacacattacagaagacctaaaggac
ttggaggatcaggccaaattagccagagacttgaaaaacaaagctgatgaaatcctaaac
agaactaaggaaactgatgtcagtgacatagagaaaaccctgaatgacacttcccaactc
catgacaagataaaacagaagctgaatgacactgaagacaacagaaatgttactgataaa
ttacttgatcagagtgaaaaaaaactaacaaatgctgaaaagaatttaaacaagcctctg
gccaaaaggcttaaaaatgaaattgaggctctgaagaataaaacagaaatgaatcgtgct
caggctttggaggcaaaagctgtagctgatgcagcattatccaacgttacagacgctaac
aaggatcttgaagaaatagaagacaaattaaaaaagctgaaaaacaacactcaggctcta
aatgatacaataactgagcatttgaagaatataacaatggaggctaaaaatatggcaaaa
gatgttgaagctaaaatgaaacaaattgaagacttggagaaaaggattcaaaatgcagtg
caagataaaattaataaaatgaaagaactggaagatctgttggcagaggcgatgagcttg
aaggaatatattgctgaaaaagttgtcaattatacgcagtgtggcacttaa
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