Tachysurus fulvidraco (yellow catfish): 113659926
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Entry
113659926 CDS
T08119
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113659926 (lrrc4ca)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Ig_6
DUF7617
Sp38
DUF6821
Syndecan
RIFIN
Motif
Other DBs
NCBI-GeneID:
113659926
NCBI-ProteinID:
XP_027028816
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All DBs
Position
10:11484254..11525806
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AA seq
647 aa
AA seq
DB search
MLNKMTFLPQQQTMRGPRWNRALSDPLFILLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVTSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVRLDELEMSGNQLSVIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCDCDILWLSWWLKEVVPANTSCCARCSTPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIEPTNDEGHTIIHQKVGPT
PSSGVWETSSALSSTTTTTTRTQVSTKATEKTYTVPVTAPGDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPPRSIEIITVDEGCMTARPNMEDHLTMPPL
EHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttcctcccacagcagcagacgatgagaggtcctaggtggaat
cgggccttgtccgacccattgtttatactgttgttggcattgcaattgctagtggtcgct
ggcttggtgagagcccagacttgtccctccgtctgctcttgcagtaatcagttcagtaag
gtcatctgtacacgtcgtggcctgcgagatgtaccagatggtatctctaccaacacaagg
tacctaaacctacaagaaaatttaattcaggtgatcaaagtagacagcttcaagcactta
cgtcacctggaaatcctgcagctcagcaagaaccatatccgtagcattgagattggagcc
tttaatgggttggccagcttaaacacactggaactctttgataacaggttaactacaata
cctaatggagcatttgagtatctgtcaaagttaaaagagttatggctgaggaataatcct
attgagagcataccatcttatgccttcaatcgggtgacgtccctgagaaggctggatttg
ggtgagctgaaaaggctctcatatatttcagaaggtgcttttgagggcctaagtaaccta
cgttacctgaaccttggcatgtgtaatctaaaggagatccctaatctcacacctctggta
cgtttagatgagctggagatgtcaggaaaccagctttcagttatacgtccaggttctttc
aaaggccttgtccacttgcaaaaactgtggatgatgcatgctcagatccaaacaatcgaa
aggaatgcctttgacgatcttcagtcacttgtggagctgaatttggctcataataacctt
accctgctccctcatgacctattcacaccattacaccatttggagagggtgcacttgcac
cacaacccatggaattgtgactgtgacattctctggcttagctggtggctcaaggaagtg
gtaccagccaataccagctgctgcgctcgttgcagtacccctgcgagccacaagggaagg
tacattggtgagttggatcaaaattatttccactgttatgcacctgttattgtggagcca
cctgctgatttgaatgtgacagaaggcatggctgcagaactaaaatgccgggcaagttca
ctgacatcagtcagttggataacccccaatgggtccatcatgacacatggagcatacaag
gtgcgcatttctgtgctaaatgatgggacattaaactttacaaatgtcacaatgcaggac
acaggtacatatacatgtatggttagcaactcagcaggcaacaccactgcctctgctaca
ctaaatgtgtcttcaacagagaacagcagtttcagctactttaccacagtgacagtagag
acgattgagccaacaaatgatgaagggcacacgataatacaccagaaagtgggtccaact
ccttcttctggagtgtgggagacatcttctgcactttcatcaacaacaaccacaacaacc
cgaacacaagtctccacaaaggccacagaaaaaacatacaccgtcccagtcacagcaccg
ggagatggctccctcaataccctagatgaggtgatgaagaccacaaagataatcattggc
tgctttgtggccatcacactaatggctgcagttatgcttatcatcttctacaaaatgcgc
aaacagcatcaccagcagaatcaccatgcgccaccaagaagcattgagatcatcactgta
gatgagggttgcatgactgctagaccaaacatggaggatcatctgactatgccgccactt
gagcatgagcatcttaaccactacaatacctacaagacagcatataatcatgcatccacc
attaactctatacacagctccgcacatgaacctttgcttattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
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