KEGG   Tachysurus fulvidraco (yellow catfish): 113659961
Entry
113659961         CDS       T08119                                 
Symbol
snupn
Name
(RefSeq) snurportin-1 isoform X1
  KO
K13151  snurportin-1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113659961 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tfd03041]
    113659961 (snupn)
Spliceosome [BR:tfd03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    113659961 (snupn)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 mRNA_cap_enzyme Com_YlbF DUF6076 TPR_TTI1_C
Other DBs
NCBI-GeneID: 113659961
NCBI-ProteinID: XP_027028867
LinkDB
Position
10:6757467..6763837
AA seq 360 aa
MEALTEALSSSFCVTREHNSTSAPHPRLAQYKSKYSALDQDERRRKFLKEQKEKRLNYVN
HARRLAAGDWTGTDSDEEEKQKSQEQDEVEDEGMEVEQHKKLPRHYANQLMLSEWLVDIP
TELSADWLLVVCPVGKRSLIVASKGSTSSYTKSGYCVNRFPSLLPGGNRHNSAMGKDYTI
LDCIYSDVDRTYYILDVMCWRGHPVYDCSTEFRFYWLQSKVEEVEGLSEICNRNPFRFVS
LSSISCTTESIQKGLAHDYSFSVDGLLFYHRETHYTPGSTPLVGWLRPYMVKDILGIEVP
ECPLTTKPDYATHQMQQILEHKKPSSEVRPADQNGRYELEYLSTPELQTGSGNQKESMES
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggaagccctgactgaggcgctgtcctccagcttctgtgtaaccagagaacacaacagt
acctcagccccacatcctcgcctggctcagtacaagagcaaatacagcgctttggaccag
gatgaacggcggaggaagttcctgaaggagcagaaggagaaaaggctaaactatgtgaat
catgcccgccgtttggcagccggagactggacagggacggacagtgacgaggaggagaaa
cagaaaagtcaggagcaggatgaagtggaagacgaggggatggaggttgagcagcacaaa
aagttgccaaggcactacgccaaccagctgatgttgtcagagtggctggtggacatccct
acagagcttagtgctgattggctcctggtggtctgtccagtagggaagcgctcgctcatc
gttgcatcaaagggttctacttcatcatacactaaaagtgggtactgtgtgaaccggttc
ccttctttgctcccaggaggaaacagacacaactcagccatggggaaagattacaccatc
ctggactgtatttacagtgatgtggacaggacgtactacatcctggatgtgatgtgctgg
agggggcatccagtctacgactgctcgactgagttccggttctactggttgcagtcgaag
gtggaagaggtagaaggactgtcggagatctgcaaccgaaaccctttccggtttgtgagt
ctgtccagcatcagctgtacaacagagtccattcaaaagggcctggcgcacgactacagc
ttcagcgtggacgggctgctgttctaccaccgtgagactcactacaccccgggcagcaca
ccgctggtggggtggctcagaccctacatggtgaaagacatcctggggatcgaggtgcct
gagtgccccctcaccaccaagccagactacgctacacaccagatgcagcagatcctggag
cacaagaagccgtccagtgaggtccggcctgcggatcagaacggaagatacgagttagag
tatctgtccacgccagagctgcaaacaggaagcggcaaccagaaagaaagcatggagagc
tga

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