Tachysurus fulvidraco (yellow catfish): 113659971
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Entry
113659971 CDS
T08119
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113659971 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113659971 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113659971 (si:dkey-37o8.1)
03012 Translation factors [BR:
tfd03012
]
113659971 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
tfd04131
]
113659971 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113659971 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113659971 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113659971 (si:dkey-37o8.1)
Translation factors [BR:
tfd03012
]
Eukaryotic type
Elongation factors
113659971 (si:dkey-37o8.1)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
113659971 (si:dkey-37o8.1)
Exosome [BR:
tfd04147
]
Exosomal proteins
Proteins found in most exosomes
113659971 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
WH_Rok
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
113659971
NCBI-ProteinID:
XP_027028891
LinkDB
All DBs
Position
25:complement(9803618..9806026)
Genome browser
AA seq
458 aa
AA seq
DB search
MAKEKIHINLVIIGHVDSGKSTTTGHLVYKCGGVDPRTLEKYETAAAQMGKGSFKYAWVL
DKLKAERERGITIDISLLKFNTQKYVFTIIDAPGHRDFIKNMITGTSQADAALLVVSAAK
GEFEAGISRNGQTREHVLLAYTLGVKQLVVCVNKMDLTEPPFSQKRYEEVVKNVTVFIKK
IGFDPAAVPFVPLSGWCGDNMLAPSQKMSWFKGWKIKRKDGFSSGKTLLEVLDSLYPPVR
TASKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMVLTFSPAKLTAEVKSIEMHHQGLQ
TALPGHNVGFNIKNVAVKNLRRGDVAGNAQQDPPSDVNSFIAQVIILNHPGKIKSGYSPV
LDCHTTHVTCSFTELQEKLDRRTGKKLEDLPHFLVSGDAATVKFVPIKPLCVESFFSYPP
LGRFAARDLKQTVAVGVIKSVEKVNQVRRTAQKVQVLK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaaagattcacatcaaccttgttatcataggtcatgttgacagtggaaag
tcaaccaccactggtcatcttgtgtataagtgtggtggtgttgatccaagaaccctggag
aaatatgagacggctgcagcccagatggggaaaggttccttcaagtatgcctgggttctt
gacaagcttaaggcagaacgagagcgtggcatcaccattgacatttccttgctgaagttc
aacactcagaagtatgtgttcacaataattgatgcacctggtcaccgggactttattaag
aacatgattacaggaacttcacaggctgatgctgctctgctggttgtatctgctgcaaag
ggtgagtttgaggctggcatatcccgtaatggtcagacaagggagcatgtcttgctggcc
tacaccctaggcgtcaagcagcttgttgtatgtgttaacaaaatggacctcactgagcct
cctttcagccagaaacgttatgaggaagtagtaaaaaatgtaaccgtttttatcaagaag
attggatttgacccagctgcggtgccttttgttcccctatctggttggtgtggtgacaac
atgcttgcaccgtcacagaagatgtcttggtttaagggatggaagatcaagagaaaagat
ggcttttcaagtggcaagactctgttggaagtgcttgattccttgtacccgccagtacgc
actgccagcaaacctcttcgtctaccacttcaggatgtatataaaatcggaggtgttggc
acagttcctgtgggcaaaattgaaactgggattctgaagcctgggatggttttgaccttc
tcaccagctaagctgactgcagaggttaaatccattgagatgcatcaccaggggctgcag
acagctctgcctgggcacaatgtgggcttcaacattaagaatgttgcagtcaagaacttg
cgacgtggcgatgtagctggtaatgcccagcaagacccaccatctgatgtgaacagcttt
attgctcaggttattattcttaatcaccctggtaaaatcaaaagtggttactctcctgtg
ctggactgccataccacccatgtcacatgtagctttacagagttgcaggagaagcttgat
cgtcgcacagggaagaaactggaagacctgcctcatttcttggtctctggagatgctgcc
acagtcaaatttgttccgatcaaaccactctgtgtagagagcttcttcagctatccacct
ttagggcggtttgctgcaagagacctgaagcagactgttgctgttggggtgattaagtca
gtggagaaggtgaatcaagtgagaaggactgcacaaaaagttcaagtattaaaatga
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