Tachysurus fulvidraco (yellow catfish): 113660029
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Entry
113660029 CDS
T08119
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113660029 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113660029 (lamb1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
BNR_6
Motif
Other DBs
NCBI-GeneID:
113660029
NCBI-ProteinID:
XP_027029018
LinkDB
All DBs
Position
10:complement(8560471..8584707)
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AA seq
1782 aa
AA seq
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MILHLAALLCLGARSLAQLPERGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLEKTEPF
CIVSHLQEEKKCFVCDSRETYNDTGHTTSHRIENVVTTFAPNRLKTWWQSENGMENVTIQ
LNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWQVYRYFAYDCESSFPLVSRGPMKK
VDDVICDTRYSDIEPSTEGEAIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFTKLHTLG
DNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDAAGEVVEGMVHGHCMCNHNT
MGLNCELCQDFYHDLPWRPAEGRNTNACKKCNCNLHSTSCHFDMAVYKASGNISGGVCDD
CQHNTMGHQCEQCKPFFYQHPERDVRHPNICNHCDCDPIGSLNGGICDALTDVSLGLIAG
QCRCKNNVEGERCDQCKEGYYDLSDDPLGCKACTCNPLGTIPGGSPCDTISGNCYCKRLV
MGRNCDQCLPQHWGLSNDMDGCRPCDCDAGGALNNDCSPETGYCQCREHMSGRRCDQVES
GFYFIALDHYVYEAEDAKFGPGVTVVQRQYPQDRNPTWTGIGFVNVPEGAYLEFSIDNIP
FSMEYDILIRYEPQLPEQWEEVLMTVIRPHVITADSRCANTMPDDDNQMVSLHPGSRYVV
LPRPVCFEEGFNYTVRLSLPRYSTSSDIQSPYTLIDSLVLMPHCKNLDMFSGSGSEGGDL
VTNSAWDTFQRYRCLENSRSVVKTPMPDVCKNFIFSVSALLHEGAKACVCDPQGSLSTVC
DSNGGQCHCRPNVVGRNCDKCAPSTFLFGPQGCRPCECDPQGSVHSFCHEATGQCECIPG
AYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDPQTGQCLDCRDHTTGHSCERCLHGYYGD
PVLGSGEHCRPCMCPDGPESSRQFAGACYKSHDLQQVYCVCNQGYKGARCDECAPGYYGN
PHEDGGECRPCQCSNNIDMMDPGSCDARSGTCLKCLYHTEGQSCSYCKLGYYGDALTQDC
RRCVCNHLGTRQENCPSVGECHCDQNNGQCQCLPNVVGQNCDLCAPDTWNMASGRGCEAC
DCDPNHSSSSACNEISGQCMCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQC
NKATGHCVCVEGVSGPRCDTCARGYFGEFPHCERCHQCFAEWDVIIGDLTNQTHRLVQKV
NIVKSNGITGPYQDTINNMERSANSIRQLLAQNPATQPLTEIQSLLEQATSLMADMNEKL
NQTEDLFSQISDNSTDTKVETLSEEAQKLQRTVKDLQAQVEFMKNSDVRGAIDSVKKYMQ
ESEAAEARVNASISDPEGPLEQSALLRNYTESTMNETKEEFQRKHDEQTKALDNLAGQLE
TLDLSELSEKTCGSRAGSEACADSPCGGLGCVDAEGNRKCGGEGCNGLTTLAHNAWQKAK
DFDQDIASAMEEVDKLSKMVSEAKVKADEAKLNAQEVLHKTNKTKQRVDDSNEELRRLIK
QIRDFLTQEGADLESIEAVANEVLQMQMPTTPAQLQNLTADIRERVSSLSDVADILSQSA
ADIERAESLLEQARKARKEASDVKSTTELVQEALDQAEKAQTAVTEAIKQATSDIKGTQD
LLVSVESETADSEFKLSNATQRLLQLEKDVALLKEKALNTSTTAETTERDADSASEMAEQ
IKKGLDTELKDKYGTVEELITQKAQGVADAKKRAEMLQQEAKKLLLQASEKLQLLKDLEK
SYDENQKTLEDKANQLVDLEMAVKDLLQEISQKATLYSTCLF
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgatattacacctcgcagcccttttgtgtttaggggcacggtcgttagctcagctgcct
gagcgtggggatgtgtgcacagagggaagctgttaccccgccacgggagacttgctaatc
ggcagagcccatcagctctcagccacctccacctgtggcctggagaaaactgaacctttc
tgcatcgtcagtcaccttcaggaagagaagaaatgctttgtgtgcgattctagggagacc
tacaatgataccggacatacaaccagccacagaatcgaaaatgtggtgaccacatttgct
cctaaccgacttaagacttggtggcagtcagaaaatggcatggagaatgtgactatccaa
ctaaacctggaagcagagttccacttcacccatctcatcatgaccttcaagaccttccga
ccagctgccatggtgatcgagcgctcatctgactttggaaagacatggcaggtgtatcgt
tactttgcctatgactgcgagtcctcttttcccttggtctctcgtggccccatgaagaag
gtggatgatgtcatttgtgacactcgctattctgatattgaaccatctacagagggagag
gccatctttcgagtattggacccagctttcaggattgaagatccttacagcccaaggatc
caaaatatgctgaagattactaacctgagagtgaagtttactaagctgcacacactgggg
gataatctgctggactcacgtatcgagatcaaggagaagtactactacgccatttatgac
atggtggtgaggggcaactgtttctgctatggccacgcttctgagtgtgctcctgtcgat
gcagctggagaggtggtggaaggaatggtccacggccactgtatgtgtaaccacaacacc
atggggctgaactgtgagctctgtcaggacttctaccatgacctgccctggaggcctgca
gaggggcgaaacaccaatgcatgcaaaaaatgcaactgcaatctccacagtacctcatgt
cactttgacatggctgtgtacaaggcgtcaggcaacatcagtggaggagtgtgtgatgac
tgccagcacaacacaatgggccatcagtgcgagcagtgcaagcccttcttctaccagcat
cctgagagggacgttcgtcaccctaacatctgcaaccactgtgactgtgatcccattgga
tccctgaacggaggcatctgtgatgcgctgacagatgtttctcttggactgatcgcggga
caatgtcgttgtaagaacaacgtggagggcgaacgatgtgaccagtgcaaagaaggctat
tatgacctcagtgacgatcctctgggatgtaaagcttgcacatgtaatcctctgggtaca
atccctggtggaagcccttgtgacacgatttctgggaactgctactgtaagcgcttagtt
atgggcagaaactgtgaccagtgcttgcctcagcactgggggctcagcaacgatatggat
ggctgcaggccatgcgattgtgacgctggaggtgctctcaataatgattgttctccagag
acagggtattgtcaatgtcgggagcacatgtcaggcagacgctgtgaccaggtggagtct
gggttttacttcattgctctggaccattacgtttatgaagcagaagatgctaagtttgga
cctggtgttacagttgtgcagagacaatatcctcaggaccgcaatccaacctggactggc
attgggtttgtgaatgttccagaaggagcttatctggagttcagcattgacaacatccct
ttttccatggaatatgacattctaattcgatatgaaccccagcttccagagcagtgggag
gaagtactaatgactgtcatcaggcctcatgtcatcacggctgatagccgctgtgccaac
actatgccagatgatgacaaccaaatggtgtcccttcatcctggctccagatatgtggtg
ttacccaggccggtgtgttttgaggaagggtttaactacacagtgcgtctgagtcttcct
cgctactctaccagcagtgacatccagtccccatacacactcattgactcacttgtgttg
atgccacactgtaagaatctggatatgttctctggttccggatcagagggtggtgatctg
gtgaccaacagtgcatgggacacattccagcgctaccgctgcttagagaacagccggtcc
gtggtgaagacccccatgcctgacgtctgcaaaaacttcatcttcagtgtgtctgcttta
ctgcacgagggagctaaagcttgcgtttgtgaccctcagggttctcttagtacagtgtgt
gattcgaatggtggccagtgccattgccggcctaacgttgtgggcagaaactgtgacaag
tgtgccccgtctactttcctcttcggaccacagggctgcagaccatgtgagtgcgatcca
cagggttcggtgcattcattctgccatgaggccaccggtcagtgtgaatgtattcctgga
gcttatgggcgtcagtgtgatcgttgtctcccaggatactggggctttcccaactgccgg
ccttgtacttgcaacggccatgcggagcagtgtgacccccaaactggacagtgcttagac
tgtagagatcacaccactggacacagctgtgagagatgtttgcatggttattatggtgac
cctgtcctgggatccggagagcattgccgtccctgtatgtgtccagatggccctgagagc
agccgacagtttgctggggcatgttataagagccatgacttacaacaagtgtattgtgta
tgcaaccagggctataaaggtgccaggtgtgatgagtgtgcaccaggatattatggaaac
cctcatgaggatggtggagaatgtcgtccttgtcagtgcagtaacaacattgacatgatg
gaccctggatcatgtgacgcgcgctcaggcacctgcctcaaatgtctgtatcacacagag
ggccagagctgtagttactgcaagctgggttattatggtgatgctcttactcaggactgc
agacggtgtgtgtgtaaccatttgggcactaggcaggaaaactgcccctctgtcggtgaa
tgccactgtgaccagaacaacggacagtgccagtgcctgcccaatgtagttggacagaac
tgtgatttgtgtgccccagacacttggaacatggccagcggtcgaggctgtgaagcctgt
gactgtgaccctaatcactcctccagctcagcctgcaatgagataagtggccagtgtatg
tgtaagcctggatttggaggaagaacatgcagggagtgcagagagctgttttggggtaac
cctgaagtcaaatgtcatgcatgtgactgtgaccccagaggaattgctgagcagcagtgt
aacaaagccactggtcattgtgtgtgtgtggagggtgtgtcgggcccccgctgtgacact
tgtgctcggggatattttggtgaattcccacactgtgaacgctgccaccagtgcttcgct
gaatgggatgtgatcataggagacctcactaaccagacacaccgacttgtgcagaaagtt
aacattgttaaatccaatggcatcacgggtccctaccaagacaccatcaacaacatggag
aggagcgccaattccattcgtcagcttctggcccagaaccccgccactcaaccgctcact
gagatccagagcctgctggagcaagctacatccttgatggctgatatgaacgagaagttg
aatcagacagaggatctcttttcccagatctctgacaacagcacagacacaaaggtggaa
acgctcagcgaagaagctcagaaactgcagcgcactgtcaaagatctgcaagcccaagtt
gagttcatgaagaattcagatgttcgaggagcaatagacagtgtgaagaaatacatgcag
gagtctgaagcagcagaggctcgtgtgaacgcctccattagtgatccagagggcccattg
gagcaatcagccttactgcgtaattacacagagtccacgatgaatgagactaaagaagag
tttcagaggaaacatgacgagcaaacgaaggcactggacaatctggctggccagctcgag
accctggacctttctgaactcagcgagaagacttgtggcagccgtgctggctcagaggcc
tgtgctgactctccgtgtggaggtctgggttgtgtggatgctgaaggaaacaggaagtgc
ggaggcgagggatgtaatggtctcaccacattggcccataatgcctggcaaaaagccaag
gattttgaccaggatattgccagtgccatggaggaggtggacaagctttccaagatggtg
tctgaagcaaaagtaaaagcagatgaggccaagctgaatgctcaagaggtgctgcacaag
acgaacaagaccaagcaacgtgtggatgacagcaacgaggagctgcgcagactcatcaaa
cagattcgagacttcctcacccaagaaggagcagatctggagagcattgaggctgtggct
aacgaggtgttgcagatgcagatgcccaccacaccagctcagctgcagaacctaacagca
gatattcgggagcgtgtgtccagcctgtcggacgtggcagacatcctcagccagagtgct
gctgatattgagagagctgagtccctgctggagcaggcccgcaaagccaggaaagaggct
tctgatgtgaagagcaccactgaactggtacaggaagctctggaccaggcagaaaaagct
cagacagctgtgactgaggcaataaagcaggccacaagcgacatcaagggcacacaggat
ctgcttgtatctgtagagtcagagacagcggattcagagttcaagctgagtaatgctacc
cagaggcttcttcagctggaaaaggatgtggctcttttaaaggaaaaagctctcaacact
tccaccactgctgaaacgacagaaagagatgcagacagtgcaagtgagatggcagagcag
attaaaaagggtctggatacagagctgaaggataagtacggtactgtggaggagctcatc
actcaaaaggctcagggtgtagcagatgctaagaaaagagctgagatgcttcaacaggaa
gccaaaaagctgctgctgcaagctagtgaaaaactccaacttctcaaagatttggaaaaa
tcctacgatgaaaaccagaagacactggaagacaaagccaaccagctggtggatctggaa
atggctgtgaaagatttacttcaagaaattagccagaaagccactttatacagcacctgt
ctgttttaa
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integrated database retrieval system