Tachysurus fulvidraco (yellow catfish): 113660079
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Entry
113660079 CDS
T08119
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113660079 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113660079 (cnot2)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113660079 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113660079 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
113660079
NCBI-ProteinID:
XP_027029120
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Position
10:complement(7951385..7961390)
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AA seq
521 aa
AA seq
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MFSATRKKFVEGVESDYPDESMYYGQPSMFPHRSEKDMLASPSPSSSGQLSQLGASLYGP
QSALGFSIRSMSNNNPQLNRSLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNTRN
MMNHSQVGQGMSLGGRTSSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMGR
SQGFGMNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRREGNGNPTPLHNPLAGRAPYV
GMVTKPSTEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSQNLNSSTKSSSSADGPKFP
GDKTSAQNNNQQKKGIQVLPDGKVTNIPTGMVTDQFGMIGLLAFIRAAETDPGMVHLALG
SDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARY
GEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTY
YFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgctacaagaaagaagtttgtagagggggtcgaaagcgactaccctgatgag
agtatgtactatggccagccgtcgatgttccctcatcggtcggagaaagatatgctggca
tctccttcgccgtcatcgtcaggtcaattgtcgcagcttggtgcaagtttgtatggtccc
caaagtgcactaggcttctcaataaggagcatgagcaacaacaaccctcagttaaaccgg
agtttaacacaaggtactcagttaccgagccatagcaccccaacaacaggggtcccaaca
atgtctctccatactccgccttcgccaaacaggggcattctgcctatgaacaccaggaac
atgatgaatcactcgcaagtgggtcagggcatgagtcttggtggcaggaccagcagtatg
ggaagctcaggcctcgggagcccaaaccgcagttcacccagcatcatctgtatgccaaag
cagcaaccggcacgacagcccttcaccatcaacagtatgtcaggttttggaatgggtcga
agtcaggggtttggtatgaactcgttatcaaacaacatctttaatggaacagatgggagt
gaaaatgtgacgggactggacctctcggactttccagcattagcagacagaagtcggagg
gaaggaaatggaaacccaacaccgttgcataatccgttggctggaagggctccctatgtt
gggatggtcacaaagccatcaactgaacagtcccaagatttctcgattcacaatgaggat
tttcctgcactgcctgggcctaactataaggatccaacgctgagcacggatgaaagcaaa
tcacagaacttgaactcatcaaccaagagcagctccagtgcagatggtcccaagttccca
ggggataagacatcagcacagaacaacaaccagcagaaaaaggggattcaggtgttgcct
gatggcaaggtgacaaacattcctactggaatggtgacggatcagtttggaatgattggg
ctgctagcctttattcgagcagctgaaacagaccctggaatggttcatctggcgttagga
agtgatttgaccacactgggactcaacctcaactctccagaaaacctgtaccccaagttt
gcatctccgtgggcatctgcaccatgccgaccacaggatatcgatttccacgttccatcg
gagtacttaaccaacattcacataagggacaagcttgctgcaataaaactagcacgatat
ggggaggacctgctgttctacctctactacatgaatggaggagatctcttacagcttcta
gctgctgtggaactctttaaccgagactggaggtaccataaggaggagagggtgtggatt
acaagagcacctggcatggagcccactctgaagaccaacacttatgagagggggacatac
tacttctttgattgtcttaactggaggaaggttgctaaggagttccaccttgaatatgac
aagcttgaggagcggcctcacgtaccaaccaccttcaactacaacccggcgcagcaggcc
ttctga
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