KEGG   Tachysurus fulvidraco (yellow catfish): 113660248
Entry
113660248         CDS       T08119                                 
Symbol
cul1b
Name
(RefSeq) cullin-1b isoform X1
  KO
K03347  cullin 1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04110  Cell cycle
tfd04114  Oocyte meiosis
tfd04120  Ubiquitin mediated proteolysis
tfd04141  Protein processing in endoplasmic reticulum
tfd04310  Wnt signaling pathway
tfd04340  Hedgehog signaling pathway
tfd04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113660248 (cul1b)
   04120 Ubiquitin mediated proteolysis
    113660248 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    113660248 (cul1b)
   04340 Hedgehog signaling pathway
    113660248 (cul1b)
   04350 TGF-beta signaling pathway
    113660248 (cul1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    113660248 (cul1b)
   04114 Oocyte meiosis
    113660248 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfd04121]
    113660248 (cul1b)
Ubiquitin system [BR:tfd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     113660248 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 113660248
NCBI-ProteinID: XP_027029404
LinkDB
Position
25:11163107..11184564
AA seq 873 aa
MWKAERSEDKQASDETMSSNRNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMARSRYMQLY
THVYNYCTSVHQSNQVRGAGLPSAKPSKKSPTPGGAQFVGLELYKRLKEFLKSYLTNLLK
DGEDLMDESVLKFYTQQWEDYRFSSKVLNGICSYLNRHWVRRECDEGRKGIYEIYSLALV
TWRECLFRPLNKQVTNAVLKLIERERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTL
SVYKEYFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQD
ELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIH
NQGLAAIEKCGDSALNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINN
NAITKMAQSSSKSPELLARYCDSLLKKRASWWSRGRIPLSRCRSPGSTPRQGANPATEEL
TLSAAPKPGQNGRVASGRASCVKPVSDQICRQDDLLLRPQAGKNNDNSNTSKNPEEAELE
DTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSK
LQRMFQDIGVSKDLNEQFKQHLSNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSY
QRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMSILLQFNTENSYTVQ
QLADSTQIKVDILVQVLQILLKSKLLVLEDENANVDEMDFKPDTVIKLFLGYKNKKLRVN
INVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFK
PRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgtggaaggcagaaaggagcgaagataagcaggccagtgacgagacaatgtcgtctaac
aggaacccacacgggctcaaacagattgggctggaccagatctgggatgacctgcgggca
gggattcaacaggtgtatacacgacagagcatggccaggtcccgctacatgcagctctac
acacatgtttacaattactgtaccagtgtccatcagtcaaaccaggtgaggggtgcaggc
cttccctccgccaaaccctccaagaaatctcccactccaggaggagcacagtttgttgga
cttgaactgtacaaaaggctaaaggagtttctaaagagctatttaacaaatcttttgaag
gacggggaagatctgatggacgagagcgtactgaagttttacacgcagcagtgggaggac
taccgtttctccagtaaagtgttaaatgggatttgttcctacctcaacagacactgggta
cgccgggagtgcgacgaagggcggaaaggaatttacgaaatctattcgctcgccttggtc
acgtggagagagtgtttattcagacctctaaataaacaggtgacgaatgctgtattgaaa
ctcatcgagcgagaacgaaacggcgagactattaacaccaggctgatcagtggagttgta
cagtcctatgttgaactgggcctgaatgaggacgatgcctttgctaaaggacccacgtta
tccgtatacaaagagtactttgagagccagttcttggctgatacggaacgcttctacaca
cgagaaagcacagagtttctccaacaaaaccctgtaaccgaatacatgaaaaaggcagaa
gcacgacttttagaggagcagcggcgggttcaggtttaccttcacgagagcacacaagac
gagctggctcgcaagtgtgaacaggttctcatagagaaacacctggagattttccacaca
gagttccagaaccttctggatgccgacaagaacgaagatctgggtcgaatgtacaacctt
gtctcacgcatcacagatggtttgggggagctgaagaaactcttggagacgcacattcac
aaccaaggcctggcagccatagagaagtgtggagactcggctctcaacgatcctaaaatg
tacgtacagacaatattagacgtgcacaagaagtacaatgcattagtgatgtcagcgttc
aataatgatgctggcttcgtggctgctctggataaggcttgtgggcgattcatcaacaat
aacgccattacaaagatggctcagtcctccagcaaatctccagaactgctggccagatac
tgtgactccttactgaagaagagagcctcctggtggtccagaggcaggatcccgctctct
cgttgccgcagcccgggttcgactcccagacagggagctaatccagccactgaagagcta
actctcagtgccgcccccaagcctgggcaaaatgggagggttgcgtcaggaagggcatcc
tgcgtaaaacctgtgtcagatcagatatgcagacaagatgatcttctgttgcgaccccaa
gcaggaaagaacaacgacaatagcaacacctcaaagaaccccgaggaagcggagctggag
gacacgctcaaccaagtgatggtggtttttaaatacattgaagataaggatgttttccaa
aaattctatgccaagatgttggctaagaggctggttcaccagaacagtgccagcgatgat
gccgaggccagcatgatctccaaattaaagcaagcatgtggttttgagtacacttccaaa
ctccagcgcatgttccaggacatcggtgttagcaaggacttgaacgagcagtttaaacaa
cacctttccaactccgagcctttggacttggattttagcattcaggttctcagctcagga
tcctggcctttccagcagtcatgcacctttgcattgccttcagagctggagcgcagttac
caaagattcacagctttctatgccagcagacacagtgggcgcaaactgacgtggctctac
catctatccaagggcgagctcgtcaccaactgtttcaagaacagatacactctgcaggca
tccaccttccagatgtccattctgctgcagtttaacacggagaacagctacaccgttcaa
cagttggctgacagcactcagattaaagtagacattttggttcaggttttgcaaatcctg
ttgaagtccaagttgctggttttggaggacgagaatgcaaacgtagatgaaatggacttt
aagcctgatacagtcataaagcttttcctgggatacaaaaacaagaagttgcgggtcaac
atcaacgtgccaatgaagacggagcagaaacaagagcaggagacaacacacaaaaacatc
gaagaagacagaaagctgctcatacaggctgctatcgtcagaatcatgaagatgaggaag
gtcctgaagcaccagcagctccttgcagaagtcctaaatcagttgtcatcacgcttcaaa
cctcgagtccccgtcatcaagaaatgcatcgatattttgatagagaaggaatatctggag
cgtgtcgatggcgagaaggacacctacagctacctggcttaa

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