Tachysurus fulvidraco (yellow catfish): 113660367
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Entry
113660367 CDS
T08119
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113660367 (chd9)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113660367 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
DUF5994
Motif
Other DBs
NCBI-GeneID:
113660367
NCBI-ProteinID:
XP_047672626
LinkDB
All DBs
Position
1:complement(4250344..4318159)
Genome browser
AA seq
2918 aa
AA seq
DB search
MDYFGDSNLFEDCFDSGHVSLADELDLGSGFDPLQLNAVDPEKHPGMVAGSMPSANQHGV
DYHQQIGQFDGMKAQTSMTQSFPNQGGGDGSVGGVFINKQSHFQDPTMNQAPQTNGLYPS
TSPIWGERRANAYHQQRLQHQQIQQQQQQRHKEHLRQQQFQEQFQHRQGQRHQHQFNQQH
PHLQQGQQVLSQHQLSAQHQMPHQQINPHTLRPKSYPDHSNFYYQGNVTSHQGHHGAINS
EGSPFHPGVDPQSKSYLNVPMIAATSQQQSGFEMAQTVQRFHGVPVTEESNLGYHVQSSP
AAYTLSSCSASMASSYPSSQYSFPGQPPPVVTSSQPRSTMPPGSENVPRNSSCLFMADPL
MEQRQKGTQVQVPGNHPQECPFRSLQPSKPVPDAYGAPEIFSEGLASFNAANGPFLHETQ
NNHGVTGSGFQGLDDVSLLDHQHGGIGAIGEGHNILEEELLPELEAFVQEETSVWNNGRH
DEEPRGKAVNDLKGDEDVDFKGSLTLHYKAQPPKNTNGSSNQARLLSPPMKSSSSSSSSS
SSSSSSSSSSHSSSSEKRVPKRLQQMEVSSLEDKQQKANRIISEAIARARERGEKNIPRV
MSPESFPSSSEPRKHRAGSSKSRAKKGCKSARIIKSPREKQKSLIKKIVIKIGKKKKRKM
ESSDELSDDEPPPRRPSKYEDSKRRSNRQIKRKRYAEEQEARLSDEETKVIAKAKKINAS
APKEPKVQLFVENPSEEEGAVVDKIMASRKAKKEVSSGVVVEVEEYFVKYKNYSYLHCEW
ATEQQLEKDKRIQQKIKRFKIKQAQRAHFFADMEEDPFNPDYVEVDRVLEVSYCEDNDTG
EPVVYYLVKWCSLPYEDSTWELKEDVDQSKIVEFEQLQAARPDSRRIERPPASHWKKLGQ
SREYRNGNSLREYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLHEILSNGIKGP
FLIIAPLSTIANWEREFRTWTHLNVIVYHGSALSRQMLQQYEMYFRDSQGRVVKGAYRFQ
AVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMRLEHKVLLTGTPLQ
NTVEELFSLLHFLEPTRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL
APKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLVNTMMELRKCCNHPYLI
KGAEEKILEDFREVYSPSALDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRC
LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAV
LQSMSGRDNSLGGGGTLQQQLSKKEIEDLLRRGAYGALMDEEDEGAKFCEEDIDQILQRR
TKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTVNGRNSLVID
TPRVRKQTRPFSATKDELAELSEGDSSGDDKPKLRRPHDRLNSYGRTECFRVEKNLLVYG
WGRWRDILQHGRFKKQLSERDVEWICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRTK
ELQNHLGLSTPVPRGRKGKKMKTQSSGFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCNK
VLLRVRMLYYLKQELIGSQCQKVLEGVEASGIETWVPELDHSELPVMWWDMLADKCLLIG
VYKHGYEKYNTIRADPALCFLERVGRPDDKAIAAEQRANDFMDGDGDDPEYKPAPTLIKD
DMEDDASSPGDLIITDTGGEGGSVLDSGGSTLGVVTGAYWPSSSALTARLRRLITASQRF
TKSRQILQIHQTQQTSTPEICALPPVLPDAINPKIAAKIERQQRWTRREEADFYRVVSTF
GVVFDPELGRFDWTKFRAMARLHKKTDESLHKYLCAFTAMCRRVCRLPPREGDAVDPSLS
IQPITEERASRTLYRVELLRQIREQVLRHPQLFERLALCQAGSDLPVWWETGTHDRDLLI
GAAKHGVSRTDYHILRDPELSFMAAQRNYSQNKGTQAQSQAQNQALLVGQTRTPNPLAQI
QSSGVPPSPLTNSTPSEVTPKEELLLEGEEEAGAPSWPSLRPPTLAGDGLKEEKEENERR
MEAARTKPLAPNPESRKQKKLSKRSRKEARRRSGSDTDSDASSSSSSSSSSSRSSSTSST
STRSGSSSSSSSSSCSSGSSSSSSSSSSSEESDGEEASKNTAVVPGIKGFDEDSIASHST
THDDTQDSHVTNGTTNLSHPLHGGGYMLAASYWPKDRVMINRLDSICQAVLKGKWPGSRR
VYDGSAAVSSFYTTKLMDSAANLTDDPAASPQGSKVKKHDADREKEFSVKINDQEGSLKL
TFQKQGLPLKRPLNGEEGPLAQQQYLARLQELQSASDSSLTDYTKTQNSYPQGLSGQMRL
NGMVDGQPMMKKRRGRRKNVEGMDHLFMNKNKATAMPDQLTPGWSGGMNPASTPSASQVP
GTADTESRVPVINLKDGTRLAGDDAPRRKDLDQWLKEHPGFVADVGAFIPGVNKIQFQDG
RPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKIGGAFAPPLKDLCRFLQENPEYGV
PPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKVTNAASVNASTALGV
NPLLSNGLVSGLDLNSLQALQSLQSFQLTAGLMGLQTDPANMAAMLPMMLSGMAGLPNLL
GMSSLLGKQEATSGEDSGKKSGGETAAQTPEIQSERTESPSSTSASASGQALALNPLLLS
SMLYPGMLLNPGLNLPVANQGQATSPQPTPTAQLVPSDAALKSSGQSEKDVEDNGEEPDE
QKDISGPEGSGKVESSSSDAESSSSSSSSEDSDSTDED
NT seq
8757 nt
NT seq
+upstream
nt +downstream
nt
atggactactttggtgactccaaccttttcgaggattgttttgactcaggccatgtttct
ttggcagatgagctggatcttggctcagggtttgaccctctgcagctcaatgcagtggat
cctgagaaacaccctggaatggtggcaggttctatgccatctgctaaccagcatggggta
gactaccatcaacagatagggcagtttgacggaatgaaagcccagacatccatgacacag
tcttttcctaaccaaggaggaggagacggcagcgtcgggggcgtcttcattaacaagcag
tcccattttcaagacccaaccatgaatcaagcacctcagactaacggactgtatcccagc
accagtcctatatggggggaacgcagagcaaatgcctaccaccagcagcggctgcagcat
cagcagattcaacagcagcagcagcagcggcacaaagaacatctgcgtcagcaacagttt
caagaacagtttcagcatcgtcaaggccaacgtcatcaacatcagttcaatcagcagcat
ccacaccttcaacagggtcagcaagttttgagccagcatcagctgtcagctcagcatcag
atgccccaccaacaaattaacccccatactttacgtccaaagagctatccagaccatagc
aacttctactatcaaggaaacgtcacgtcccaccaaggtcaccacggcgcaattaattca
gagggaagcccttttcatccaggtgttgatccacagtccaagtcttaccttaatgtcccg
atgattgctgcaacatctcagcaacaaagtgggttcgagatggcacaaacggtccaaagg
ttccatggcgttcctgtgacagaggaaagtaatctcgggtaccatgtacagtcttcacct
gcagcctataccctgtcttcctgctcagccagtatggcatcatcttacccttcctctcag
tattcatttcctgggcagcccccgcctgtcgtcacttcatcacagcctcgcagcaccatg
ccacctggttctgaaaacgttccccgtaattccagctgcttgttcatggcggatccttta
atggaacaacggcaaaaggggacccaggtccaggttcctggaaaccatcctcaggagtgt
ccttttcgtagcctgcagccttctaaaccggtcccggatgcttacggggctcctgagatt
ttctcagaaggtttagcttcgttcaatgcagcaaacggtcctttcttacacgagactcaa
aacaatcacggcgtcaccggcagcgggtttcagggtctggacgacgtctcattgctcgat
catcagcacggaggcatcggggcaataggagaaggacataatatcctggaagaagagctg
ctgcccgagctcgaagcttttgttcaggaggagacgtccgtctggaacaacggaagacac
gacgaagaaccaagagggaaagcggtaaacgatttgaaaggagacgaagatgtggatttt
aagggttcactaactttgcattataaggcacagcctccaaaaaacactaatggttcaagc
aaccaggcccggctgctcagcccgccgatgaagagcagctcctcatcttcttcctcctcc
tcgtcttcgtcttcctcgtcttcgtcttcacactcgtcctcctcggagaaacgcgtcccc
aagcggttgcagcagatggaggtttcatcgctggaagacaaacagcagaaggccaaccgc
atcatctcggaggccatcgccagggcgcgtgagcggggcgagaaaaacatcccacgcgtc
atgagcccagagagtttccccagctcctccgagccacgcaagcacagagcaggatcctct
aaatccagagcaaagaagggctgcaaaagcgctcggatcatcaagtctcccagagaaaag
cagaagagtctgatcaagaaaatagtgataaagatcgggaagaagaagaaacgcaagatg
gaatcttcagacgagctgtcggatgacgagccgccgcctcgacgaccctccaaatacgaa
gactcgaagcgtcggtcaaaccgacagataaagaggaagaggtacgccgaggagcaggag
gcccggctgtccgacgaggaaacgaaggtcatcgccaaagccaagaagatcaacgcgagc
gctccgaaagagcctaaagtacagctgtttgtggagaatcccagtgaggaagaaggtgcg
gtggtggataaaattatggcctctcgcaaagcaaagaaggaggtgtcttcaggggttgtg
gttgaagtggaagagtattttgtaaaatataaaaactactcttatctgcattgtgagtgg
gctaccgagcagcagctggagaaggacaagaggatccaacagaaaatcaagcgcttcaag
attaaacaggctcaaagagcgcacttcttcgcagacatggaggaggatccgtttaatccc
gattacgtagaagtggacagagtcctggaggtctcatactgcgaggacaacgacactgga
gagccggtggtgtattacctggtgaaatggtgctcgttgccatatgaagacagcacttgg
gaactaaaggaagatgtggatcagagtaaaattgtggagtttgagcagctgcaggcagcg
agaccagactctagaagaattgagcgccccccagccagtcactggaagaagctgggtcag
tcgagggagtaccggaacgggaacagtctcagggaataccaactggagggcgtcaactgg
ctgctcttcaactggtataacaggcgtaactgtatcttggccgacgagatgggtttgggg
aaaaccatccagtcgatcacgttcttgcacgagatcctctccaatgggatcaaagggcct
ttcctgatcatcgcaccactctccactatcgctaactgggagcgagagttccgcacgtgg
acccacctcaacgtcatcgtctatcacggcagcgccctcagccgccagatgctgcagcaa
tacgagatgtacttccgagactctcagggccgtgtggtgaaaggtgcataccgttttcag
gcggtcatcacgacgtttgagatgattttaggaggctgtccggagctcaacgcgatcgac
tggcgctgcgtgattatcgacgaagctcatcgtctgaaaaacaagaactgcaagctgctg
gagggcttcaaacttatgcgcctggagcataaagtgttgttgaccggtacaccgctgcag
aacactgtggaggagctgttcagtctgctgcatttcttagagcccacaaggttcccctct
gaaagtaccttcatgcaggagtttggagacttgaagactgaggaacaggtccagaagctg
caggctatactgaagccgatgatgcttcgccgcctgaaggaggatgttgagaagaaactg
gctcctaaagaagagactattatcgaggtggagctcaccaacatccagaagaaatactat
cgtgccattttggagaagaacttctcctttctggccaaaggagccggccaagccaacgtc
cccaacctggttaataccatgatggaactgaggaaatgctgcaaccatccctacctcatc
aaaggtgcggaggagaagatcctggaggattttcgtgaggtgtacagtccatcggccctg
gacttccacctgcaggccatggtgcagtctgccggcaaactcgtcctcatcgacaagctg
cttcctaaaatgaaggccggcggccacaaagtgctcatcttctctcagatggtgcgctgc
ctcgacatcctcgaagactacctcatccagagacgatacctctacgaacggatagatggg
cgtgtgcgtggaaaccttcgccaggctgcgatagaccgcttcagtaagccagactccgac
cgcttcgtctttctgttgtgcacgagagcgggaggcctgggcattaacctcactgctgct
gatacctgcatcatctttgactcggattggaacccacaaaatgacctgcaggctcaggca
cgatgccacagaatcggccagaacaaggcagtgaaggtttaccgactcatcacacgcaac
tcgtacgagcgggagatgtttgacagggccagcctcaaactgggtctggataaagccgtg
ctgcagagcatgagcgggcgtgacaacagtctcggaggaggagggacgctccagcagcag
ctctccaagaaagagatcgaagacctgttgaggcgcggcgcgtacggcgcgctcatggac
gaggaagacgagggtgccaagttctgcgaggaagatatcgaccagatcctgcaacgcaga
accaaaaccatcaccatcgagtctgaaggacgcgggtccactttcgccaaggccagtttt
gtagcctctgggaatcgcacagacatttctctggatgatccgaacttctgggataaatgg
gcgaaaaaggccgagatcgacatggacaccgttaacggcagaaacagcctggtgatcgac
acgccgagagtaaggaaacagacgcggccgttcagcgcgacgaaagacgaactggctgaa
ctgtcagaaggcgatagcagcggagacgacaagcccaaactacggcggccgcacgaccgc
ctcaacagctacggccgcaccgagtgcttcagggtagagaagaaccttttggtctacggg
tggggcagatggagagacatccttcagcacggccgctttaagaagcagctgagcgagaga
gacgtggagtggatctgtagagcgctgctcgcttactgcctggtgcactacaggggagac
gacaagatcaagagcttcatgtgggacctgatcgcgcctaccgaggacggcaggaccaaa
gaactccagaaccacttgggactctccacaccagttccccggggcaggaaagggaagaag
atgaagactcagtccagcgggtttgacattcagaaagcagagtggatcaggaagcacaac
ccggagcacatgctgtctgatgacggatacaagaagcatctcaagcatcactgtaacaag
gtgttgttgagagtgagaatgctgtactatctgaaacaggagcttattggttctcagtgc
cagaaagtgctggaaggagttgaagcaagtgggatagagacctgggttcctgagctggat
cattcagagctgccagttatgtggtgggatatgctcgcagacaagtgtcttctgatagga
gtctacaagcatggttatgagaagtacaacactattcgtgcagatcctgctctgtgcttc
ctagagcgggttggccggccggacgacaaggccatcgctgctgaacagagagcaaacgac
tttatggatggggacggtgacgatccagaatacaagcctgcgcccactttgattaaagat
gacatggaggatgacgcttcctctcctggtgatctgatcataacggacacgggaggagaa
ggtggctctgtactggacagcggaggcagtacactgggagtcgtcacaggagcgtactgg
ccgtcttcgtccgccttaacggctcgactgcgccgcctgatcaccgcatcgcagcgcttc
accaagagcagacagatcctgcagatccaccagacgcagcagacctcgacccctgaaatt
tgcgctctgccccccgtacttcctgatgcgatcaatcccaaaatagctgccaagatcgag
agacaacaaaggtggaccaggagagaggaggcagatttctatcgtgtggtgtctacgttc
ggagtggtgttcgatccggagcttggccgcttcgactggaccaaattcagagccatggct
cggctgcacaagaagacagacgagagtctccacaaatacctctgtgctttcactgccatg
tgcaggcgggtctgccgccttccaccgagggagggcgacgccgtggatccgtctctgtcc
atccagccgatcacagaggagcgcgcttcacgtacgctgtaccgagtggagctactccgg
cagattcgggaacaggttctgcgccaccctcagctctttgagcgcctggcattgtgccag
gctggctcagatctgcctgtgtggtgggagacaggcactcatgaccgcgacttgctaatc
ggtgcagccaagcacggagtgagccggacagactaccacatcctcagagaccctgagctg
agcttcatggcggcccagaggaactacagccaaaacaagggcacacaggcacaaagccaa
gctcaaaatcaagcgcttcttgttgggcagacgcgcactccaaaccctttagcacagatc
cagtcttctggagtacctccttcaccactaactaactccacccctagtgaggtaacaccc
aaggaggagctgcttttagagggagaggaagaggcaggggcaccgagctggccatccctc
aggcctcccacactggcaggagacgggttgaaagaggaaaaggaagagaacgagagacgg
atggaggctgcacggacgaagccgctcgcacccaaccccgagagccgaaaacagaaaaaa
cttagcaagagaagtcgcaaagaggcgcggaggaggtctgggtcagacaccgattcagac
gcatcttcctcgagctcctcgtcaagctcttcctcgagatcctcgtctacatcttcgacc
tcgacaaggtcaggatccagttcctcgtcctcgtcgtcttcctgctcttctggctcgtcg
tcttcgtcttcatcgtcctcatcatctgaagaaagtgatggtgaagaggcttcaaagaac
actgcagtggtgcctggtattaaaggctttgacgaggacagcatagcatctcatagcacc
actcacgacgacacgcaggacagccacgtgacaaacggcaccactaacctctcccatccc
ctccatggcggaggctacatgctcgctgcttcctattggccgaaggaccgcgttatgata
aaccgtctggacagtatttgtcaggcggtattgaagggtaagtggcccgggtctcgccgc
gtgtacgacggaagtgctgcagtgtcctcgttttacaccaccaagctcatggacagtgca
gccaacctgaccgatgaccccgcagcctctcctcagggttcaaaggtgaagaagcatgat
gcagacagagaaaaggagttctcagtcaaaataaatgaccaggaaggcagtctaaagctg
acctttcagaagcagggtttgccgctgaaacgtcctctaaacggcgaggaaggacctctg
gctcagcagcagtatctggctagactacaggaactgcagagtgcctccgatagcagcctg
actgactacaccaaaacacagaacagctatccacaaggcctgagcggacagatgcgactg
aacggaatggttgacggtcagccaatgatgaagaagaggagaggaagaaggaagaatgta
gaaggaatggatcatctctttatgaacaagaacaaagctactgcgatgcctgatcagctt
actcctggttggagcgggggcatgaacccggcctcaactcctagcgcctcacaggtccct
gggaccgcggacaccgagagcagagtccccgtcataaacctaaaagacgggacacggctc
gccggggacgacgctccgagacggaaagatctagatcagtggctgaaggaacacccggga
tttgtggcagacgtcggcgccttcatcccaggggtgaataaaatacagtttcaggacgga
aggccgaagcagaagaggcatcgctgtagaaatcccaacaagattgacgtcaacagcctc
acaggagaggaaagagtccaaatcatcaacaggagaaacgctcgcaagattggtggtgcc
tttgctcctcctctcaaggatttgtgcagattcctgcaggaaaatccagagtacggagtt
cctccggagtgggcagacgtcgtcaaacagtcgggatacctcccggagagcatgtttgac
cgcatcctcacaggtcctatcgtaccggaggaggtgagcagacgaggccgtcggcccaaa
aacgctctggccaaagtgactaatgcagcaagcgttaacgcaagcacagctctcggtgtc
aaccctctgctgagcaacgggctcgtgtccggtctggacctgaacagcctacaggccctg
cagagccttcagagcttccagctcactgcaggactcatgggcctccagaccgaccctgct
aacatggctgccatgcttcccatgatgctctctggcatggccggtctgcccaacctactc
ggaatgagcagcctgttgggaaaacaagaagccacctctggcgaggattcaggaaagaag
agcggaggggaaacggcagcgcagacgccagagatccagtcagagaggacagaaagtcca
agctcaacaagtgcttcagcctcaggccaagcgctagctctcaaccccttactgctctcc
agcatgctttacccagggatgcttctcaacccaggccttaatttacctgtggccaatcag
ggacaagctaccagtcctcagcccactcctacagctcagctcgtcccctccgacgccgca
ctaaaaagctccggccaatcggagaaggacgtggaggacaacggggaggagcctgatgaa
cagaaggacatcagtggtccagagggctcggggaaagtggagtcgtcttcctcagacgca
gaaagttcttcatcatcttcgtcatcagaggactcggattccaccgacgaagactga
DBGET
integrated database retrieval system
