Tachysurus fulvidraco (yellow catfish): 113660597
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Entry
113660597 CDS
T08119
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
tfd04137
Mitophagy - animal
tfd04144
Endocytosis
tfd04340
Hedgehog signaling pathway
tfd04350
TGF-beta signaling pathway
tfd04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113660597 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113660597 (smurf1)
04350 TGF-beta signaling pathway
113660597 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113660597 (smurf1)
04137 Mitophagy - animal
113660597 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
113660597 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113660597 (smurf1)
04121 Ubiquitin system [BR:
tfd04121
]
113660597 (smurf1)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113660597 (smurf1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113660597 (smurf1)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113660597 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
113660597 (smurf1)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
HECT type E3
113660597 (smurf1)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113660597 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
113660597
NCBI-ProteinID:
XP_047664046
LinkDB
All DBs
Position
24:complement(14399766..14436732)
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AA seq
748 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNASDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENEGPVFEESGPGRPLSCFMEEPL
PYSDPTGAAGGGNCHTLESPNQEQRLQVQRIRNQDTRSHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRECVTAEQPGDQSDCSSRDLNSVSCEELGPLPP
GWEIRSTVSGRIYFVDHNNRTTQFTDPRLHHIMSQQSQVKESSQALPVQMEVPVEEGEGE
LPVRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLM
VKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYF
HFVGRIMGLAVFHGHYINGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILENDITS
VLDHTFCVEHNAFGKFLQHELKPNGRNIPVTEENKREYVRLYVNWRFMRGIEAQFLALQK
GFTELIPQHLLKPFDHKELELIIGGLGKIDLNDWKANTRLKHCVVDSNIVKWFWQAVESF
DEERRGRLLQFVTGSTRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRI
DIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacggatcgagcatcaaaatcagactgacagtcttg
tgtgccaagaatctcgcaaagaaagacttcttccgattgcccgacccttttgccaaagtt
gtggtggatggctcaggccagtgtcactccacagacacagttaagagcacactggaccct
aaatggaaccagcattatgatctatacatcgggaaaaccgactcgatcacgatcagcgta
tggaaccataagaagatacacaagaagcagggagccggattcctgggctgcgtgaggctc
ctgtccaacgccatcagcagactcaaagatacaggctaccagcgtttggatttatgcaag
ctgaacgcctctgacagcgacgctgtccggggtcagatagtcgtaagcctccagacccgt
gacaggattggcagtggcgggcctgtggtagactgtagaggactgttagaaaatgaaggg
ccagtctttgaggaatccggaccaggacggcctctcagctgtttcatggaggagcctctg
ccctactcggaccccacaggggctgctggtgggggaaactgtcacactctggagtcacct
aatcaagagcagaggcttcaagtccagagaatccgaaaccaggatactagaagtcacgct
cacaccccacagaaccggccacatgggcaccagtcgccggacctcccagaaggctatgag
cagaggaccacggtgcagggacaggtctattttctacacacacagactggtgtcagcact
tggcacgatcccagaataccacgagaatgtgttactgcggaacagcccggtgatcagtcc
gattgctcctccagggatctgaacagcgtgagctgtgaggaactgggtcctctgccgccc
ggctgggagatcaggagcacggtatcaggaaggatttattttgttgaccacaataacaga
accacacaattcacagacccgagattacaccatatcatgagccaacagtctcaggtgaag
gagtcgagtcaggctctgccagtgcagatggaggttcctgtagaggagggtgaaggcgag
ctgcctgtgcggtatgagcgagatctcgtccagaagctcaaggtgctgcgccatgagctg
tccttgcagcagcctcaggccggacactgtcgcattgaggtgtcccgtgaagaaatcttt
gaggagtcgtatcgtcagatcatgaagatgaggccgaaggacctgaagaagaggctaatg
gtcaaattccgtggagaagaaggcttggattacggcggagtggcgagggagtggttgtat
ctgctctgtcacgagatgcttaacccgtactacggcctgttccagtactccacagataac
atctacacgctgcagatcaaccccgactcgtccatcaaccctgaccacttgtcgtacttc
cactttgtggggaggatcatgggcctcgctgtgtttcacggccactacataaacggaggc
ttcacgctgcccttctacaagcagctcctggggaaacccatccagctttctgacctggag
accgtggaccctgagctccacaagagccttgtctggattctagaaaatgacatcacatct
gttctggatcatacgttctgcgtcgaacacaacgctttcggcaaattcctccagcatgag
cttaagcccaacggcagaaacatcccagtgacggaggagaataaaagggaatatgtcagg
ctctacgtgaactggaggttcatgcgtggcatcgaggcccagttcctcgctctgcagaag
ggcttcaccgagctcatcccgcagcaccttcttaagccttttgaccacaaggaactcgag
ctgatcatcggaggactcgggaagatcgacctgaacgactggaaggcgaacacgcggctg
aagcactgtgtggtcgacagtaacatagtgaagtggttttggcaggcggtggagtcgttc
gacgaggagaggaggggcagattgctccagttcgtcaccggctccacacgcgtccctctt
caaggcttcaaagcactgcaaggttctacaggttctgcaggaccaaggctctttactatc
catttgatcgacgccaatacggataatctgcccaaagctcacacatgcttcaaccgcatc
gacatcccaccttacgagtcgtacgagaagctctacgagaagctcctgactgccgtggag
gagacgtgcggttttgccgtggagtga
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