Tachysurus fulvidraco (yellow catfish): 113660603
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Entry
113660603 CDS
T08119
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113660603 (trpa1b)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113660603 (trpa1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113660603
NCBI-ProteinID:
XP_027030010
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Position
25:13006532..13028352
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AA seq
1108 aa
AA seq
DB search
MKQDNSYSCVIDEIDLANMANVNVFEWVVQGDFSALDYLSRKSPTHLSSKDENGARPIHY
AAASGHVDIIRLIVSMTGPEELDAQDAEGQTPLHFAVEKNQESSCSVLLDMGANPNTLNT
AMMAPIHLAICKEYNPLVQVLLSCSRTEVNLEGDLGNTPVMLACSYNNCEALHTLFKYGA
KLCHQNKLGHFAIHTVAFSGAKEAMEVILQKGEDLGISTLTHINYLDKSKSSPLHLAVRG
GNTEVIKLCIAKGAKVDQQQCDKSTALHFACTQGAMEAVKAMLLPYDKRMDEIINIRDAA
NQAPLHRATLFDHVELAKYLVSKGADINCVDCKGFTPLLLATTSSAWKTVSFLLSKDADF
RIKDQTGRNFLHLAIFQPKGLKNLPEHILQNKEVWELMSDEDFEGCTPLHYACKLGIHDS
VKNMLGFEISLGRKSKEKKSALHFAAEYGRINTCLRLLETIRDSRLLNEGDENGLTPLHL
ASRGGHIKVVDLLLRRGALFQSDYKGWSCLHHAAAEGYTQTMNVLLAANVKLLDNTDEDG
NTALHLAAREGHVAAVKLLLNLGAEILLNNNHASFFHEAVRSGKKDVTNAAIDNERLPEI
IAMFKLGYTNCPVLDLIEVLPESTKHLLDLCMTESEHDPNSIDYRITYNFRWLQAPLNIQ
KTQTDKAVYIQPLAALNAMVQYNRLELLTHPVCQKYLEMKWKAYGSKAHLLNLAVYLLGL
LPLTYLVMNLKPTQISTTNGTTFIMENMSFHNQSYIISVSMLMVLVMNIYAICKEVIQMA
QQRMSYFLDSSNISDWATAISSIAFVTPMFFDVKGTLPWQAGALAILFAWINFLLYFQRF
ERFGIYVIMFGEITKTLVSVLVLFIFLLLAFGLSFHALMLHQNEFNSIGLSLAQTFVMTV
GELNYETSFQEAYLQGLLPFPAVTYYVFVLFILLMPILFMNLMIGLAVGDIAEVQRNAAL
KRIAMQIDLHTNLEEKLPYWFMNRVDKDSVTIYPNKKCAKFQGMLQQFIGMNSPEGELRT
RLDTQMAYSNPLELELMKQKARLKQISSSLEKQDMLLKLIIQKMEITTEADENDGPDDFR
SITTAKLHKSRWVPLMQALGVKKSQSTC
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagataactcctatagctgtgtgatagatgagattgatttggctaacatggct
aatgtcaacgtgtttgaatgggtggttcaaggcgatttttctgcactggattacctgagc
aggaagagtccgactcacctaagttctaaagatgaaaatggagcacgaccgatccactac
gctgctgctagtggacacgtggacattattcggcttattgtatccatgacaggacctgag
gagctggatgctcaggatgcagaaggccaaactcctctacattttgctgtggagaaaaac
caggagtcaagctgctcagtgttgctagacatgggcgccaatccgaacaccctaaacaca
gccatgatggcaccgattcacttggcaatctgcaaagaatacaatcccctagtacaggtt
ctcctgtcctgcagtcggaccgaggtgaatctggagggagatttgggaaacacacctgtg
atgcttgcatgctcttacaataactgtgaagctcttcacacactttttaaatatggagca
aagctgtgtcatcagaacaagctggggcattttgcgatacacacagtggctttttctgga
gctaaagaagcaatggaggtgatcctgcaaaaaggagaggacctgggcatttccaccctc
acacacattaattatttggataaatcaaagagcagcccgcttcatctagccgtacgaggt
ggaaatacagaagtgatcaaactttgcatcgctaaaggtgcgaaagtggaccagcaacag
tgtgacaagtccacagcgctgcactttgcctgcacacagggagcgatggaagctgttaaa
gcgatgcttcttccttatgacaaaagaatggatgaaatcattaacattagagacgcagcc
aatcaggcgccgttacacagagccacgttattcgatcacgtggaactggctaaatatctc
gtctccaagggagcggacatcaattgcgtggactgtaagggctttacccctttactcctg
gctacaacaagcagcgcatggaaaactgtttcattcttactatctaaagatgcagatttt
agaattaaagaccaaactggacggaacttcctccatcttgccatcttccaaccgaaagga
ttgaaaaatcttcctgaacatatcctacagaataaagaagtgtgggagctgatgagcgat
gaggactttgaaggctgcactcctctacactacgcctgcaaactcggcatccacgactct
gttaaaaacatgctggggtttgaaatctccttgggacgcaagtcgaaggagaaaaaatct
gcgcttcattttgctgcagaatacggacgaataaacacgtgtctcaggcttttggagacg
atcagagactcgcgtttgctaaacgaaggagatgagaatggactgacgccgctccacctg
gcctctagagggggccacattaaggtggtggatctgctgctcaggaggggagcactgttc
cagagcgattataaaggctggtcgtgtttacatcacgctgcggctgaaggatacacgcaa
accatgaacgtccttctggcagccaacgtcaaactgctggataacacggatgaagacggg
aacacagctttgcaccttgccgcacgtgaaggtcacgtcgcagctgtaaagctcttgctg
aacctaggagctgaaatcctgctcaataataatcacgcctcattcttccatgaagctgtg
cgcagtgggaagaaagatgtcactaacgccgctattgacaatgagaggttaccagaaata
atagctatgtttaaactgggctacactaactgccctgtgctggatttaatcgaggttcta
cctgaatcgacaaagcatcttctggatctgtgtatgactgaatctgagcatgacccaaac
agcattgactatcgtatcacatacaatttccggtggcttcaggctccactgaatatacag
aaaacacaaacggacaaagctgtatatattcagcctctcgcagctcttaatgcgatggtt
cagtacaaccggcttgagctgctcacacaccctgtgtgtcagaaatatttagagatgaaa
tggaaagcgtacggaagtaaagctcatttactcaaccttgccgtgtatctgttaggcctt
ttacccctcacatatctcgtcatgaacttgaaacctacacaaattagcacaacgaatggc
acaactttcatcatggagaacatgtccttccacaatcaaagctatataatttcagtgtcc
atgctgatggtcctcgtcatgaacatttatgccatttgcaaagaggtgatacaaatggca
caacagcgaatgagttactttttggacagctcaaacatatcggattgggcgacagccatt
tcctctattgcctttgttactccgatgttcttcgatgtgaaagggactctgccgtggcag
gctggagctttggcgattttatttgcttggatcaacttccttctatacttccagaggttt
gagcgctttggtatttatgttataatgtttggagaaatcacaaagacgcttgtgagtgtc
ctcgtccttttcatcttcctgttgctggcctttggattgtccttccatgcactgatgctt
catcagaacgagttcaactcgattggtctatcgttggctcagacgtttgtaatgacagtt
ggagagttgaattatgagacttcatttcaggaagcataccttcagggacttctgcctttt
cctgcagtcacctactacgtttttgtgctcttcattctcctcatgccaattcttttcatg
aacttgatgattggtttggctgttggggacatcgctgaggttcaaaggaacgcagcactg
aagaggatcgcaatgcagattgatcttcataccaatctggaagagaaactgccatattgg
tttatgaacagagtggacaaagatagtgtcactatttacccaaacaagaagtgtgccaag
tttcagggaatgttgcagcaattcattgggatgaatagtccagaaggtgaactgcgcact
cgtttagacactcagatggcatactcaaatccattagagctagaactgatgaagcagaaa
gccagactgaagcagatttcctcatcactggagaaacaagacatgttgttgaaactcatc
atacagaaaatggagatcacgacagaggcagatgagaacgatggaccagacgatttccgc
tccatcaccactgcgaaattacataaatctcgctgggttcctttgatgcaagctcttggg
gtcaagaagtcacagtcgacatgctga
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