Tachysurus fulvidraco (yellow catfish): 113660642
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Entry
113660642 CDS
T08119
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113660642 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113660642 (stau2)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113660642 (stau2)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113660642 (stau2)
mRNA cycle factors
Stress granule specific factors
113660642 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
113660642
NCBI-ProteinID:
XP_027030089
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All DBs
Position
25:13048693..13119286
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AA seq
623 aa
AA seq
DB search
MAQVKVQTSAHAVPSINGTVPTVPPAPPQDNMANPKEKTPMCLVNELARFNRIQPQYKLL
NERGPAHAKIFTVQLCLGEQMWEAEGSSIKKAQHLTANKALAECTLPCPPPRITKPDTHT
NPGSITPTVELNGLAMKRGEPAIYRPLEPRTPHRANYNFRGIFNQRYHSTVPRVFYVQLT
VGSNDFYGEGRTRQAARHNAAMKALQALRNEPIPEKQLQSLEDKKGSEEESDANKSEISL
VYEIALKRNMPVNFEVLKESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAASSILQE
LKKLPFIPIVEKPKVHYKKRPKTILKAGPEYGQGMNPISRLAQIQQAKREKEPEYTLLSE
RGLPRRREFIMQVKVGDEVTSGTGSNKKVAKRAAAEAMLLHLGYKASTPIQNTQEKPHMD
NKSWNGQRASFPEASTNTQKGILHLSPDVYQEMEASRNKGATVPSVTPMTPVTYMNPKEV
SVAPFYNNSASKTAAMARELLNKTPKTPTIPCSSVQPSQQLEYLAHIQGFQVQYTDRQTD
TEFVTYLTLSPVQMTFHGIGSSIQASHDQAALSALKQLSEQGLDPVDGGVKVENGPCEIS
VKHPDGKQTNSGSQDCADPNAVA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtaaaagtgcagacctcagcgcacgccgtgccctccatcaacggcactgtg
cccaccgtcccaccagctcctccccaggataacatggcaaaccctaaagagaaaactccg
atgtgtctggtgaatgagttagcccgtttcaaccggatccagccgcagtacaaactgctg
aacgagcgggggcctgcgcacgccaagatcttcactgtacagttgtgtttaggtgagcag
atgtgggaagctgaaggctccagcattaagaaagctcagcacttgacagccaataaagcg
ctagcagaatgcacgctgccctgccccccgccacgcatcactaaaccagacacacacacc
aatccaggcagcatcacccccactgtggagctgaatggattggcgatgaagcgaggagaa
cctgccatctacaggccgctggaacccagaaccccccacagggccaattacaacttcaga
ggaatattcaatcagaggtatcactctacggtccccagggtgttctacgtgcagctgact
gtaggcagtaatgatttttatggtgaaggtcgaacacgtcaagcagctcggcacaacgca
gccatgaaagctttgcaggcgctgagaaatgaacccattccagaaaagcaacttcagagt
ctggaggacaaaaaaggctcagaggaggagagcgacgcaaataaatctgaaatcagcctg
gtgtatgagattgcactgaagaggaacatgcctgtgaattttgaggtgctgaaggagagt
ggcccgccccacatgaagagcttcctgacccgtgtgacggtgggcgagttctctgctgag
ggtgagggcaacagcaagaagctgtcgaagaagcgtgcagcttcctccatcctgcaggag
ctgaagaagctgcccttcatccctatagtggagaagcccaaagtgcactacaagaaacgg
cccaagaccatactgaaggctggcccagagtatggtcagggaatgaaccccatcagccga
ctcgctcagatccagcaggctaaacgagagaaagagcccgagtacacactgctgtccgag
agaggcttgccacgccgccgagagttcatcatgcaggtgaaggtgggtgatgaagtgacc
tcaggaacagggtcgaataagaaagtcgctaaacgtgcagctgcagaggcaatgctgctc
catctgggatacaaagcctccacgcctattcagaacacacaggagaagccacacatggac
aacaaaagctggaatggacaaagagcctctttccctgaagccagcactaacacgcagaaa
ggaatcctccacctatctccggacgtgtatcaggagatggaggccagcaggaataaaggt
gccactgtgccctcggtcacccccatgacccctgtgacctatatgaaccctaaagaagtg
agcgtggcaccgttttacaacaacagcgcctcaaagacagccgccatggcacgggagctg
ctgaacaaaacgccaaaaacacccaccatcccctgcagctccgttcagccatcgcagcag
ctcgagtacctcgctcacattcagggcttccaggtgcagtatacggacagacagacggac
acagagtttgtgacatatctcactctctcgcccgttcagatgacgttccacggcattggg
agctccatacaggccagccatgaccaggcggctctgagtgccttgaagcagctttccgag
cagggacttgacccagtggacggaggagtcaaggtggagaatggaccctgtgaaatatca
gtcaagcatccggatgggaaacagactaactcaggctctcaggactgcgcagatccaaac
gctgtcgcgtag
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