Tachysurus fulvidraco (yellow catfish): 113660715
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Entry
113660715 CDS
T08119
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04517
IgSF CAM signaling
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113660715
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113660715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113660715
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113660715
Intermediate filaments
Intermediate filament-binding proteins
113660715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
113660715
NCBI-ProteinID:
XP_027030236
LinkDB
All DBs
Position
7:complement(20674467..20750718)
Genome browser
AA seq
2352 aa
AA seq
DB search
MELQRATSMPGPLTPGPLSPGGVSPEHLSPEHLSPGAGPSYQVSSPGPSYGAAAFNYNML
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
ISVETEDSKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLID
FDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDHAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKGWERLEK
AEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDIAAYEERVQVVVAVASELEAENYHDIKRITVRKDNVLRLWDYLLELLKARR
QRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQA
DRVKNVNANAQKFADDSEGFKPCDPQVIRDRVAHMEFCYQELTQLSVERRARLEESRRLW
KFFWEMAEEEGWIREKEQILSSDDCGKDLTGALRLLSKHKAFEDEKSGRAGHLQQTVHQG
EELVAAGHFGADKISQRIADVQEQWVALEQLSAARKIRLQEACALHQFQADADDMDAWML
DALRIVSSTDVGHDEFSAQALVKKHKDVAEEIASYRPVLDALHEQSKALPEEQARSADAN
GRLAGIEERYKEVVELTRLRKQALQDALALYKMLSEADACELWIDEKEQWLNGMEIPEKL
EDLEVIQHRFESLEPEINSQASRVAVVNQIARQLIHSGHPSEKEIKTQQDKLNTRWSQYR
DLVDRKKDALNSALGVQNYYLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGM
ERDLVAIEDKLGDLGKEADRLAEEHPDQASGIKSHLGEIKDVWEEMNGTMHAREESLGEA
SKLQQFLRELDDFQVWLSRTQTAVASEDMPNTLTEAEKLLAQHEGIKNEIRNYKEDYQKM
RDMGETVTQGQTDAQYMFLSQRLQALDTGWNELQKMWENRQKLLSQSHAYQLFLRDTKQA
EAFLNNQEYVLAHTEMPATLEGAEGAIKKQEDFMTTMDANEEKINGVVETGRRLVSDGNI
SAERIQEKVVSIEQRHKKNRQAASELLTKLKDNRDLQRFLQDCQELSLWISEKLLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLEKIQKDGTALVAEKPETGPVVKEKLESLKKT
WDELESTTQTKAQCLFDANKAELFTQSCADLDKWLSGLEGQIQSDDFGKDLTSVNILLKK
QQMLESQVEVRQKEVEELRTQAQALSQEGKGSDEVDGLRCGVEKKFHEMQEPLKKRRSNL
MASREIHQFNRDVEDEILWVEERMPMATSTEHGNNLQTVQLLIKKNQTLQKEIQGHQPRY
DDIFERSTHVLKDNSPVSATIRQRLDELKRLWSLIQEEVEKRHRRLEEAHKAQQYYFDAA
EAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRALVAAG
HPESERISMRQSQVDKLYAGLKDLSEERRGKLDERSCLFQLNREVDDLEQWIAEREVVAG
SHELGQDYEHVTMLQERFREFARDTGNIGQERADAVNKMADELINSGHVDAATIAEWKDG
LNEAWADLLELIDTRTQILAASYELHKFYHDAKEVLGRILDKHKKLPEELGRDQNTVEAL
QRMHTTFEHDIQALGTQVKQLQEDAARLQSAYAGDKAEDIQRREAEVLEAWRSLLEACDA
RRVRLIDTNNKFRFFSMVRDLMLWMEDVIRLIDAQEKPRDVSSVELLMNNHQGIKAEIDA
RNDSFTSCVELGKGLLSRKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEMHQF
SRDAGVAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTM
ELLEVRRQQEEDEKKRQAQAAEAPPPETASTQQRESEQVSQNGPPPEQDSPREDTGESDV
VNGVAESSPGSSPTGSRKGKLGQAATLPTKSQDTAAVQIEGFLNRKHEWEGHNKKASNRS
WHNVYCVINNQEIGFYKDSKSASQGIPYHGEVPISLKESTCEIALDYKKKKHVFKLKVSN
GNEYLFQAKDDEEMNSWIQVISCKTPSEISSHSTPASGRTQTLPTSVSMGAESSPGKREK
DKEKRFSLFKKK
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagagctaccagtatgcctggacccctgacccctggacctttatctcct
ggaggtgtttctcctgagcatctttcccctgagcacctgtctccaggggcaggaccatcg
taccaagtttccagtcctggccccagttatggtgctgccgcttttaactataacatgctg
gagggtcgatttaagcaactgcaagatgagcgcgaagcggtgcagaagaagacctttaca
aaatgggtgaactcccacctggctcgagtctcctgccgcatcacagacctctacatggat
ctgagggatggccgcatgctcattaagctcctggaggtgctttctggagagagactgccg
aagccgacgaaaggccgtatgagaattcactgtctggagaacgtggacaaagctctgcag
ttcctcaaagaacagcgtgttcacctggagaacatgggatctcatgatattgttgatggc
aaccaccgtctcacgctgggcctcatctggaccatcattctgcgcttccagattcaggac
attagcgttgagacggaagacagcaaggaaaagaagtctgccaaggatgctctgctactc
tggtgtcagatgaagaccgcaggttatccaaatgtcaacattcacaatttcaccacgagc
tggagagatggcatggccttcaacgctctcattcacaaacacaggcctgacctgattgac
tttgacaagctgaagaaatccaatgcccactataatttgcagaatgcctttaacctggct
gaacagcacttgggcctcacgaagctgctggaccctgaagatatcagcgttgaccatcct
gatgaaaagtccatcatcacctatgttgtcacttactatcattacttctccaagatgaag
gcactgaaagttgaaggcaaacgtattgggaaggtgctagatcatgctatcgagactgag
aagatgattgagaagtatgaatctctggcctcggacctgctggaatggatcgaacagacc
atcataatcctcaataatcgcaagtttgccaactctctggttggagtgcagcagcagctt
caggcatttaacacctaccgaacagtggagaaacctcctaagtttacagaaaaaggcaac
ttggaggtgctgctgtttaccattcagagcaaaatgcgagccaacaatcagaaagtctac
atacctcgagaaggaaaactcatatcagacatcaataagggttgggagcggttggagaaa
gcagagcatgagcgggaactggctctgcgaacggagcttattcgccaggagaagttggag
cagctagcccgcaggtttgatcgcaaggcagccatgagggagacctggctaagtgagaac
cagagactcgtctcacaggacaactttggttttgatctgcaagccgtggaggcggccacc
aagaagcacgaagccatcgagacagacatcgccgcatacgaggagcgtgttcaggtggta
gtagctgtagcctctgagctggaggcagagaactaccatgacatcaagcgcatcacagtg
cgcaaagacaacgttctgcggctgtgggactacctcctggagctcctgaaagctcgacgc
caaagactggaactcaaccttggcctgcagagagtctttcaggagatgctctacatcatg
gactggatggatgagatgaagatgctgctgttgtctcaggactatggaaaacatctgctt
ggtgtagaggacctgctgcagaaacatgctctggtggaggcagacattgccatacaggct
gatcgtgtcaaaaatgtcaacgccaatgcacagaagtttgctgacgactctgaaggcttt
aagccctgtgacccgcaggtgatccgtgaccgcgtggcccacatggagttctgctaccag
gagctaacacaactgtcagtggagaggcgcgcacgtctggaagagtctcgtcgcctctgg
aaattcttctgggagatggctgaggaggaaggctggatccgtgagaaggagcagattctg
tcatcagatgactgtggtaaggacctgacaggggcactgcgcctcctcagcaagcacaag
gcctttgaagatgagaagagtggccgtgccggacacctccagcagacggtgcaccagggt
gaggagctggtagccgccggccattttggtgccgacaagatcagtcagcgtatcgccgac
gtccaggaacagtgggtggcgctggagcagctgtcagcagcgcgcaagatccgtctgcag
gaggcctgtgccctgcaccagttccaggctgacgctgatgacatggatgcctggatgcta
gatgcattgcgcattgtgtccagcactgacgtgggccatgacgagttctcggcacaggct
ttggtgaagaaacacaaggacgtggctgaagagattgccagttacagaccagtgctggat
gctcttcacgagcaatccaaagcgctacctgaagaacaggcacgctcagcagatgcaaac
ggacgtctagcaggtatagaggagcgatataaggaggtggttgaactgaccaggttgagg
aagcaggcgctgcaggacgcactggcattgtacaagatgctaagcgaagcagatgcctgt
gaattgtggatcgacgaaaaagagcaatggcttaatggaatggagattccagagaaactg
gaggatctggaggtgattcagcacagatttgagagtctggagccagagattaacagccag
gcctctcgggtggccgtggtgaaccagattgcccgccagcttatccacagtgggcaccca
agtgagaaagagatcaaaacccagcaggacaaactcaacaccaggtggagtcagtatcgt
gatttggtagaccggaagaaggatgctctcaactctgctctaggagtgcagaattactac
ctcgaatgcaacgagaccaagtcctggattcgcgaaaagaccaaggtgatcgagtccacc
caggatctaggcaacgatctggctggcgtcatggcacttcagcgcaagctgactggcatg
gagcgagatcttgttgccatagaggacaaactgggagaccttggaaaagaggctgaccga
ttggccgaagagcatccggaccaggcttctggcatcaagagtcatttgggtgagatcaaa
gatgtgtgggaggagatgaatggtaccatgcatgctcgtgaagagtccctgggagaggcc
agcaagcttcagcaattcctcagggagctggatgacttccaggtgtggctttcacgcacc
cagactgccgtggcttccgaggacatgcccaacactctgactgaggctgagaagctcttg
gcacagcatgagggaatcaagaatgagatccgtaactacaaggaagactatcaaaagatg
cgtgacatgggcgagacagtgacccaaggccagacagatgcccagtacatgttcctgagt
cagaggctgcaagcactggacactggctggaacgagctccagaagatgtgggagaacagg
cagaaactcttgtcgcagtctcatgcctatcagctcttcctcagggataccaagcaggcc
gaggctttcttgaacaatcaggaatacgtattggcccacacagagatgccagctaccctt
gaaggagcagaaggagctatcaagaagcaggaggacttcatgactaccatggacgctaat
gaggaaaagattaacggcgtggtggagaccggccgcaggctggtcagcgatgggaacatt
agtgccgaacgtatccaggagaaagtggtctctattgagcaaaggcataagaaaaatcgt
caggcagccagtgagctcctcacgaagctgaaagataaccgagatcttcagaggttcctc
caggactgtcaggagttgtccttgtggatcagtgagaagctgttaacagcacaggacatg
tcctatgatgaagcacgcaacctgcacagcaagtggctcaagcaccaggccttcatggca
gagctgcagtccaacaaagagtggctagagaaaattcagaaggatggcacagcactggtg
gctgagaaaccagagactgggccggtggtaaaggagaaactggaatcactgaagaagaca
tgggacgagctggagtccacaacccagaccaaggcccagtgcctgtttgacgctaataag
gccgagctgttcacacagagctgcgctgacctggataaatggctctctggcctggagggt
cagatacagtcagacgacttcggcaaagacctgaccagcgtcaatatcttgttgaagaaa
cagcagatgctagaaagtcaagtggaagtgaggcagaaggaggtggaggagctccgcacg
caggcccaagcactcagccaggagggcaaaggctcagatgaggtggatggcctacgctgc
ggcgtggagaaaaagtttcatgagatgcaggagccactgaagaaacgccggagcaacttg
atggcctctcgtgagatccaccagttcaaccgtgacgtagaggatgagattctctgggtt
gaggagagaatgccaatggccacatctacagagcatggcaataatttacagactgttcag
ctgctcattaagaagaatcagacccttcagaaggagatccagggtcatcagccacgctac
gatgacatttttgagaggagcacgcacgtcttgaaggacaacagtcccgtcagtgcaaca
atccggcagcggttagatgagctgaagcggctatggagcttaatccaggaggaagtcgaa
aaacgccacagacgcctggaggaagcacacaaagcccagcaatactacttcgacgcagcg
gaggctgaggcctggatgagtgaacaggagctgtacatgatgtcagaagaaaaggcaaag
gatgagcagagctctgtagctatgctgaaaaaacaccagatcctggagcaggcggtggag
gactatgctgagacagtgcaccaactctctaaaaccagcagggcattagtggctgcagga
catccagaaagtgagagaatcagcatgcgtcagtctcaagtggacaagctgtatgccggt
ctgaaggacctgtctgaagaaagacgaggaaagctggacgagagatcctgcttgttccag
ctgaaccgtgaggtggatgatttggagcagtggattgcagagagagaggtggtggcaggt
tctcacgagctcggccaggactacgaacatgtcactatgctacaggagcgtttccgagag
ttcgctcgcgatacaggaaacatcgggcaggagcgcgctgacgcagttaacaagatggca
gacgaactgatcaactctggtcacgtagatgccgccaccatcgccgagtggaaggacgga
ctcaacgaggcttgggccgacctactggagttaatcgacacccgcacacagatcctggct
gcctcctatgagctgcacaagttctaccatgatgccaaggaggtgcttggacgcatctta
gacaaacacaagaagctcccagaagagttgggcagagaccagaacacagtggaggcgctg
cagagaatgcacaccaccttcgaacatgacatacaggctttgggaacgcaggttaagcag
ctgcaggaggatgcggcacgtttgcagtcagcctatgcaggagataaggctgaggatatc
cagaggcgtgaggcggaggtgctggaggcctggcgttctcttctggaggcgtgtgatgcc
cgccgcgtgcgtctcatcgacaccaacaacaagttccgcttctttagcatggtgcgtgac
ctgatgctttggatggaggatgtcatccgactcatcgatgcccaggagaaaccaagggac
gtttcatctgtggagcttttaatgaacaatcaccaaggcatcaaggctgagattgatgct
cgtaatgacagcttcacatcctgcgtggaactgggaaaaggcctgctttcacgaaaacac
tacgcatccgaagagatcaaagaaaagttactccagctgaccgacaaaagaaaagagatg
attgacaagtgggaagacagatgggaatggctgcgactggttctggagatgcaccagttc
tcacgggacgcgggcgtagctgaggcgtggctgctgggccaggagccttacctgtccagt
cgagagatgggtcagagtgtggacgaggtggagaagctcatcaagaggcacgaggctttc
gagaagtcggctgctacttgggaggagcgctttgctgccctggagagacttaccacgatg
gaattattggaagtgagaagacagcaagaggaagatgaaaagaagagacaggctcaagct
gcagaagctccacctcccgagactgcatcaacacagcagagagagagcgagcaggtatct
cagaatgggccaccaccagagcaggactctcctcgggaggacacaggagaaagtgatgta
gttaatggtgtggcagagtccagtccaggatcctccccgacaggaagccgtaaggggaaa
ctgggtcaagctgctacactaccgaccaagtcccaggacacagctgcggtgcagatcgag
ggcttcctgaaccgcaaacatgagtgggagggccacaacaagaaagcatccaatagatct
tggcacaatgtctactgtgtgataaacaaccaagagatcggcttttacaaagacagcaaa
agtgccagtcagggaatcccgtatcatggcgaagttcccattagtctgaaggaatctaca
tgtgagattgccctggactacaagaagaagaaacacgttttcaaactcaaagtttcaaat
ggaaatgagtatctcttccaagccaaagatgatgaggagatgaactcatggatccaagtg
atctcatgcaagacaccctccgagatcagcagccatagcaccccggcctcgggacgcacc
caaaccctgcccacctctgtgagcatgggtgctgagtccagcccaggcaagcgggagaag
gacaaagagaagcgcttcagcctcttcaagaagaaataa
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integrated database retrieval system
