Tachysurus fulvidraco (yellow catfish): 113660725
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Entry
113660725 CDS
T08119
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfd03009
]
113660725 (ddx21)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113660725 (ddx21)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113660725 (ddx21)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
Pre-60S particles
Helicases
113660725 (ddx21)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113660725 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
113660725
NCBI-ProteinID:
XP_027030276
LinkDB
All DBs
Position
7:complement(20887303..20902457)
Genome browser
AA seq
757 aa
AA seq
DB search
MPSLVLTSSDNVNTMNDVNEGLDSNMEIKKKKDKAKKKISITEESAECDPPAPKKLKRQK
VDTADGTVQSSPDVNGNVRKKAVKVHSGDELVNPAGEQPEQKKKKKKKAATPDNDTTEQT
PSVNGTSTKSPKTPAKVNGHLTDVTPTPSSEDSSSESEKDVETPEQKEGAFSNFKISQDT
IKLLQARGVTYLFDIQVKTFNSVYDGKDVVGQARTGTGKTFSFAIPLVEKLQSGADERRR
GRAPKVLVLAPTRELAIQVSKDFKDITKKLSVHCFYGGSSYNPQVDAIRSGIDVLVGTPG
RIKDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYKKGAESNPQTLLFSAT
CPPWVYDVAKKYMRSQYVHVDLIGKKSQKAATTVEHLAIACHWSQRAAVIGDVVQVYSGS
HGRTIVFCETKREAHELSMNTSIKQSSQSLHGDIPQKQRELTLKGFRNGTFEVLVATNVA
ARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYVEQKAG
ITFKRVGVPTANDIVKSSSKDAVRFLDSVPPTAIEHFRAAAERLIEERGAVEALAAALAH
ISGATSLEQRSLLNSDAGYTTLVLSCSQEMHNIGFAWRGLKEQLGEEIDDQIKRMTFLKS
KTGVCFDFPADKVKEIQEKWQDGRRWQLTIATELPELEESMRNRGERGSGSRARGRGGFR
SGFRGGNNRSGGRGGGGRGGGRRGGGQKRNFSQAFDY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgttagttttaaccagcagtgacaacgttaacaccatgaacgacgtgaacgag
ggattagactccaatatggaaatcaaaaaaaagaaagacaaagccaagaagaaaatttcc
ataaccgaagagtctgctgaatgcgatccaccagctcccaaaaagttaaaacgacaaaag
gtggacacagccgacgggacagtgcagagctctcctgatgttaacggaaacgtcaggaag
aaagcagttaaagttcattccggtgacgagctcgtgaatccagcaggcgagcagccagag
cagaagaagaagaagaaaaagaaggcagcgacaccagacaacgatacaaccgaacaaaca
ccatcagtcaatggcacaagtacaaaatctccaaagactccagcgaaagtcaacgggcat
ttgacagatgtcaccccgacaccatccagtgaagactccagcagcgagagtgaaaaggat
gtggagacaccagagcaaaaagagggagctttctctaatttcaaaatctcacaggacacc
atcaaactgctccaagcacggggtgtgacgtatctgtttgacattcaagtaaagaccttc
aactccgtgtacgacgggaaggacgttgtcggccaagctcgtaccggcacgggaaagacg
ttctcttttgcgatcccgctagtggagaaactacagtccggagccgacgagagaagaaga
gggagagcgccaaaggtgctggttctcgcaccaactcgagagctggcaattcaggtgtct
aaagacttcaaggacatcaccaagaagctctccgttcactgcttctacggaggaagctcc
tacaaccctcaagttgatgccattcgcagcgggatcgacgttcttgtcggcaccccaggt
cgaataaaagaccaccttcagaacaacaaactggatctgtcccaactgaaacatgtggtg
ctggatgaagtggaccaaatgctcgatatgggctttgctgaacaagtagaggagatcctc
tctgcttcctacaaaaaaggtgctgaaagcaaccctcagactctgctcttttctgccact
tgccctccatgggtttatgacgtggctaagaaatacatgcgctcccagtacgtccacgtg
gacctcatcggcaaaaaatctcagaaagccgccaccacagttgagcacctggccatagca
tgccattggtctcagagagcagcagtgattggtgatgtagtgcaggtgtacagcggcagc
cacgggcgcaccatcgtcttctgtgagaccaagagggaagcacacgagctgtccatgaac
acctccatcaaacagagctcacaatctttgcatggagacattcctcagaaacaacgagag
ctcacactgaagggcttcaggaacggcaccttcgaggtcttggtggccaccaacgtggct
gcacgaggcctggacatcccagaagttgatttggttgtacagtgttctcctccaaaggac
gttgagtcatatattcaccgctctggacgaactggcagagctggaagaactggcatctgc
atctgtttttatcagcgcaaagaagaagaccaactgcgatacgtggagcagaaggctggc
attactttcaagcgtgttggcgtcccaactgcgaatgacatcgtcaaatcttccagtaaa
gatgcagtcagattcctggattctgtaccacctacagctatagaacatttccgcgctgca
gcagagaggctaatcgaagagcgaggtgcggtggaggcgctcgccgctgctctagcacac
atatcaggagccacaagtctggagcagagatcgctcctcaactcagacgctggctatacc
acgttagtgctcagctgctctcaggaaatgcataacatcggctttgcctggcgagggctg
aaggagcagctcggggaggagatagacgaccaaattaaacgcatgaccttcctgaagagt
aaaacgggggtttgctttgacttcccagctgataaggtgaaagaaatccaggaaaaatgg
caagacggccgcaggtggcagctgaccatcgccactgaacttcctgaattggaggaaagc
atgcggaaccgtggagaacgaggatctggttctagggcccgaggtcgtggtggattccgc
agcggtttccgtgggggcaacaaccgaagtggaggaagaggaggtggaggaagaggaggt
gggagaagaggaggtggtcaaaaaagaaacttcagccaggcttttgactattaa
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