Tachysurus fulvidraco (yellow catfish): 113661007
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Entry
113661007 CDS
T08119
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113661007 (ldb3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113661007 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113661007 (ldb3a)
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113661007
NCBI-ProteinID:
XP_047668092
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All DBs
Position
4:21113492..21156341
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AA seq
845 aa
AA seq
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MSTYTVTLPGPAPWGFRLQGGKDFNMPLTISRITPGSKAASGNLTQGDIIVAIDGVSTEG
MTHLEAQNKIKGANFNLALTMQRSKRPVPVSMTAPRIDTSFPVIPHQKVITNMPINNEYV
PTFNPTALKDTALSTNKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQARGA
EMSGSLPVKERVIDSASPVYQAVNSSGEVLEPAEWARRAAHMQSKSFRLLAHITGTEYMQ
DPDEEALARAREIFESGAKGPRFAKLKNWHNGLSAQILNIAHYTPVQHAAVSTGTTHVGL
PASASASAALPSQLAANQVPEQTAEPASVGSSHVSFVSSSEPQAVSQADPVAHEASEAPI
HPPEGPRHLSLAASTISTALTTQSRNHVYQKGSPPTSALDALSITPYFRSRALPKRKQSG
KAKKVSFTMQSSSSYRSQYQTSATSNQYAPPMQQAQHVQQPVHIQSTPPLQQAPPMQQSS
IHIPVGPPSTKVSTATIVPTAYPSAPGCEFQGQKAQRVHFSEAPVQAPPPAQVHVPPPAP
VHVPPPTQFHVPPSAPVYIPPSAPSNFPAHIPTAPVPSSAQSSSRPPWVMDDTFAHKFEP
SKTTTTSIKVQPLPTAAPPPPAFIPNPSSAPAALSSAPAPAIPAPFPPVARGVAQRAERF
AASNRTPMCGSCNNIIRGPFLVALGRSWHPEEFNCHYCHTSLADVSFVEEQNNVYCENCY
REFFAPTCARCSTKIMGEVMHALRQTWHTTCFVCAACGKAFGNSLFHMEDGEPYCEKDYI
ALFSTKCHGCDFPVEAGDKFIEALGYTWHDTCFVCTVCHINLEGQPFYSKKDKPLCKKHA
HAINV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttacactgtgacacttcccggacctgcgccatggggtttccgcttgcaagga
ggcaaggacttcaacatgcccctcaccatttcccggatcactcctgggagcaaagcagct
tcaggtaacctgacccagggtgacatcattgtagccatcgatggggtcagcactgagggc
atgactcacctggaggctcagaacaagatcaagggtgccaactttaacctggccctcacc
atgcagaggtcaaagcgcccagtccctgtgtcaatgactgcaccacgaatcgacacttca
tttcctgtcatccctcatcagaaggttattaccaacatgcctatcaacaacgagtatgta
cccactttcaaccccactgcccttaaggatacagctctttccaccaacaagcccattgaa
gtgaaggggccgggaggcaaggccaccatcatccacgcccagtacaacactccgattagc
atgtactctcaagacgccatcatggacgcgatcgctggtcagtctcaggccagaggggct
gaaatgtccggtagtctgcctgttaaagagcgtgttatagacagtgcttccccagtgtat
caggctgtgaattccagcggagaagtgctggagcctgctgagtgggcacggagagccgct
cacatgcagtccaagtccttccgccttctcgcccacatcaccggcactgaatacatgcaa
gacccagatgaggaagctcttgccagagcgagggaaatatttgaatcaggagccaagggc
ccgcgttttgccaaactgaaaaattggcacaacggcctgtctgcccaaatccttaacata
gcacactacacgcctgtccagcatgctgcggtgtccaccggcactacccatgtcggtctg
cccgcttctgcatctgcatctgcagctttgcccagtcagctggccgccaatcaggtgcct
gagcagactgctgaaccagcctctgtaggctctagccatgtcagctttgtatcatcctct
gaaccacaggctgtatctcaagctgaccctgtggctcacgaggcctctgaggcccctatt
cacccccccgaggggccacgccacctgtcgcttgctgcctcaaccatttcaactgctttg
actactcaatctagaaaccatgtgtatcagaaagggtcgccgcccacctctgcgctggat
gccctgtcaatcactccatacttccgcagcagagctttgcccaaacgcaagcagtcagga
aaagcaaagaaagtgagcttcaccatgcagtcctcatccagttacagatcacaataccaa
acctccgctaccagcaaccagtatgcaccacctatgcagcaagctcaacatgttcaacag
cctgttcacattcaatccactccaccccttcaacaggccccacccatgcagcagagctcc
attcacatccctgtaggtccaccttcaactaaagtcagtactgccaccattgtacctaca
gcttatcccagtgctcccgggtgtgagtttcaggggcaaaaggcacagcgtgtccatttc
agtgaagcccctgttcaagcccctcctcctgcccaagttcatgttcctcctcctgcccca
gttcatgttcctcctcctacccaatttcatgttcctccttctgccccagtttatattcct
ccttctgccccaagtaattttcccgctcatatccctactgctcctgtcccaagctctgcc
caatcctccagcagacccccctgggtcatggatgacacttttgcccataagtttgaaccc
agcaagaccaccaccaccagcatcaaagtgcagcctcttcccactgcagccccaccgcct
cctgccttcatccccaacccttcttctgccccagctgcactcagctctgccccagcacct
gctatccccgcccctttccctcctgtggctcgtggcgtggcacagagagcggagcgcttt
gctgccagcaacaggacaccgatgtgtgggtcctgcaacaacatcatcagggggcccttc
ctagtggcgctgggccgatcatggcacccggaggagtttaactgccattactgccacacg
tcactggctgacgtcagcttcgtggaggagcagaataatgtttactgtgagaactgctat
agggaattctttgcccctacctgtgcccgatgcagcactaagatcatgggagaagtgatg
catgctctgcggcagacctggcacactacctgctttgtgtgtgctgcatgtgggaaagcg
tttggaaacagcctctttcatatggaggatggagaaccttactgtgagaaagattatatt
gcgctcttcagcacgaagtgtcacggctgtgatttcccagtggaggctggggacaagttt
attgaggctcttggctacacatggcatgacacctgctttgtgtgtacggtctgccacata
aatctggaaggccagccgttctattctaagaaggacaaacctttatgcaagaaacacgct
cacgccatcaacgtgtag
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