KEGG   Tachysurus fulvidraco (yellow catfish): 113661007
Entry
113661007         CDS       T08119                                 
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113661007 (ldb3a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tfd04990]
    113661007 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:tfd04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   113661007 (ldb3a)
SSDB
Motif
Pfam: LIM DUF4749 PDZ PDZ_6 LIM_FHL2-3_N PDZ_2
Other DBs
NCBI-GeneID: 113661007
NCBI-ProteinID: XP_047668092
LinkDB
Position
4:21113492..21156341
AA seq 845 aa
MSTYTVTLPGPAPWGFRLQGGKDFNMPLTISRITPGSKAASGNLTQGDIIVAIDGVSTEG
MTHLEAQNKIKGANFNLALTMQRSKRPVPVSMTAPRIDTSFPVIPHQKVITNMPINNEYV
PTFNPTALKDTALSTNKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQARGA
EMSGSLPVKERVIDSASPVYQAVNSSGEVLEPAEWARRAAHMQSKSFRLLAHITGTEYMQ
DPDEEALARAREIFESGAKGPRFAKLKNWHNGLSAQILNIAHYTPVQHAAVSTGTTHVGL
PASASASAALPSQLAANQVPEQTAEPASVGSSHVSFVSSSEPQAVSQADPVAHEASEAPI
HPPEGPRHLSLAASTISTALTTQSRNHVYQKGSPPTSALDALSITPYFRSRALPKRKQSG
KAKKVSFTMQSSSSYRSQYQTSATSNQYAPPMQQAQHVQQPVHIQSTPPLQQAPPMQQSS
IHIPVGPPSTKVSTATIVPTAYPSAPGCEFQGQKAQRVHFSEAPVQAPPPAQVHVPPPAP
VHVPPPTQFHVPPSAPVYIPPSAPSNFPAHIPTAPVPSSAQSSSRPPWVMDDTFAHKFEP
SKTTTTSIKVQPLPTAAPPPPAFIPNPSSAPAALSSAPAPAIPAPFPPVARGVAQRAERF
AASNRTPMCGSCNNIIRGPFLVALGRSWHPEEFNCHYCHTSLADVSFVEEQNNVYCENCY
REFFAPTCARCSTKIMGEVMHALRQTWHTTCFVCAACGKAFGNSLFHMEDGEPYCEKDYI
ALFSTKCHGCDFPVEAGDKFIEALGYTWHDTCFVCTVCHINLEGQPFYSKKDKPLCKKHA
HAINV
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgagcacttacactgtgacacttcccggacctgcgccatggggtttccgcttgcaagga
ggcaaggacttcaacatgcccctcaccatttcccggatcactcctgggagcaaagcagct
tcaggtaacctgacccagggtgacatcattgtagccatcgatggggtcagcactgagggc
atgactcacctggaggctcagaacaagatcaagggtgccaactttaacctggccctcacc
atgcagaggtcaaagcgcccagtccctgtgtcaatgactgcaccacgaatcgacacttca
tttcctgtcatccctcatcagaaggttattaccaacatgcctatcaacaacgagtatgta
cccactttcaaccccactgcccttaaggatacagctctttccaccaacaagcccattgaa
gtgaaggggccgggaggcaaggccaccatcatccacgcccagtacaacactccgattagc
atgtactctcaagacgccatcatggacgcgatcgctggtcagtctcaggccagaggggct
gaaatgtccggtagtctgcctgttaaagagcgtgttatagacagtgcttccccagtgtat
caggctgtgaattccagcggagaagtgctggagcctgctgagtgggcacggagagccgct
cacatgcagtccaagtccttccgccttctcgcccacatcaccggcactgaatacatgcaa
gacccagatgaggaagctcttgccagagcgagggaaatatttgaatcaggagccaagggc
ccgcgttttgccaaactgaaaaattggcacaacggcctgtctgcccaaatccttaacata
gcacactacacgcctgtccagcatgctgcggtgtccaccggcactacccatgtcggtctg
cccgcttctgcatctgcatctgcagctttgcccagtcagctggccgccaatcaggtgcct
gagcagactgctgaaccagcctctgtaggctctagccatgtcagctttgtatcatcctct
gaaccacaggctgtatctcaagctgaccctgtggctcacgaggcctctgaggcccctatt
cacccccccgaggggccacgccacctgtcgcttgctgcctcaaccatttcaactgctttg
actactcaatctagaaaccatgtgtatcagaaagggtcgccgcccacctctgcgctggat
gccctgtcaatcactccatacttccgcagcagagctttgcccaaacgcaagcagtcagga
aaagcaaagaaagtgagcttcaccatgcagtcctcatccagttacagatcacaataccaa
acctccgctaccagcaaccagtatgcaccacctatgcagcaagctcaacatgttcaacag
cctgttcacattcaatccactccaccccttcaacaggccccacccatgcagcagagctcc
attcacatccctgtaggtccaccttcaactaaagtcagtactgccaccattgtacctaca
gcttatcccagtgctcccgggtgtgagtttcaggggcaaaaggcacagcgtgtccatttc
agtgaagcccctgttcaagcccctcctcctgcccaagttcatgttcctcctcctgcccca
gttcatgttcctcctcctacccaatttcatgttcctccttctgccccagtttatattcct
ccttctgccccaagtaattttcccgctcatatccctactgctcctgtcccaagctctgcc
caatcctccagcagacccccctgggtcatggatgacacttttgcccataagtttgaaccc
agcaagaccaccaccaccagcatcaaagtgcagcctcttcccactgcagccccaccgcct
cctgccttcatccccaacccttcttctgccccagctgcactcagctctgccccagcacct
gctatccccgcccctttccctcctgtggctcgtggcgtggcacagagagcggagcgcttt
gctgccagcaacaggacaccgatgtgtgggtcctgcaacaacatcatcagggggcccttc
ctagtggcgctgggccgatcatggcacccggaggagtttaactgccattactgccacacg
tcactggctgacgtcagcttcgtggaggagcagaataatgtttactgtgagaactgctat
agggaattctttgcccctacctgtgcccgatgcagcactaagatcatgggagaagtgatg
catgctctgcggcagacctggcacactacctgctttgtgtgtgctgcatgtgggaaagcg
tttggaaacagcctctttcatatggaggatggagaaccttactgtgagaaagattatatt
gcgctcttcagcacgaagtgtcacggctgtgatttcccagtggaggctggggacaagttt
attgaggctcttggctacacatggcatgacacctgctttgtgtgtacggtctgccacata
aatctggaaggccagccgttctattctaagaaggacaaacctttatgcaagaaacacgct
cacgccatcaacgtgtag

DBGET integrated database retrieval system