Tachysurus fulvidraco (yellow catfish): 113661038
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Entry
113661038 CDS
T08119
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X5
KO
K04378
serum response factor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113661038 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113661038 (srfb)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
113661038 (srfb)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
113661038
NCBI-ProteinID:
XP_027030749
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All DBs
Position
4:19225605..19253306
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AA seq
608 aa
AA seq
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MNRMLSSPAGSALSGNGSAGATGAAHGSVVLGGGLRTGLARAGQAVNTAGSFPGAAGRVG
ESVGMLGGSGPGISSRPGVRPGNGSGLTSLQAAAQPGVGGLGAMSARFDRDKEVGIPQVC
SASDADSESGDEDEPTGSSGSSRRGVKRERAEMEGAGIGQEAGAPPVGYGVLTGGVAGAK
PGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVY
TFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESES
LGETKDTLKPAFTVASLPGSTSAQATVPTTSTTMQVSSSPSFPITNYLAPVSGSSGSTTA
NTNGTVLKSAAATGGVMQLPGGFTFMSAGTPFPPGTPTIPLGQLQQHSLALQGQQGQTLT
TATVTASQTPQGQQAVFRLPAAVSLTGGTVPQQLQAIQVQPSAQSSSINTDSSSPEISQT
STASTATVSLPATIITSSVPTSVAGHMMYPSPHAVMYASAPTLTDGGLAVLNAFSQGTSA
MQVSHAQASDTGAVPQVFLTAPPGTVQIPVSAVQIHPMVIGQQSSGSNSNLTELQVVNLD
TTQSSKND
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaataggatgttatcaagcccagcgggttcggcactgagcggaaacggatcagcgggc
gcgactggggcggctcacggctctgtggtgctcggcggcgggctgcgtactgggctcgcc
cgggccggacaggcagtgaatacagcaggctctttcccgggtgctgcaggacgtgtgggg
gagagcgttgggatgcttggaggtagcgggcctgggatctcttccagaccgggtgtcaga
cccgggaacggcagcgggctgacctcacttcaggccgccgctcagcccggcgttggggga
cttggtgcgatgtcagccaggtttgaccgggacaaagaagtcggcataccgcaggtgtgc
agcgcctcggacgcggactccgaatcgggggatgaggacgaaccgactggttcttctggg
agtagcagacggggcgtgaagcgggagagagccgagatggaaggcgccggaatcggccag
gaggccggagctccaccggtgggttacggggtgctgactggcggagtcgccggagcaaaa
ccgggcaaaaaaacacgcgggcgagtaaagattaagatggagttcatagacaacaagctg
cggcggtacacgactttcagcaagaggaagaccggtattatgaaaaaggcatatgagctc
tccacactaacaggcactcaggtgctgctcctggtggcgagtgaaacgggccatgtgtac
acgttcgccacacgcaagcttcaacccatgattaccagtgagacgggcaaagctctgatc
caaacatgcctgaactctccagactctcctccgcgctcagacccatccacagaccagcgc
atgagtgccacaggctttgaggagaccgacctcacctatcaggtgtctgaatctgagagc
ctcggagaaaccaaggacactctgaagccagccttcactgtggccagcctgccaggtagc
actagtgcccaggccacagtgcccaccacctccaccaccatgcaggtgagcagcagcccc
tccttcccaatcaccaactacctggcacccgtgtctggcagcagcgggagcaccacagcc
aacactaatggcactgttctgaagagtgcagctgccaccggaggggtcatgcagctccct
ggaggcttcacttttatgtcagcaggcactcctttccctcctgggactccgaccatcccg
ttggggcagctgcagcaacactctctggctctacaggggcaacagggtcaaactctaacg
actgccactgttacagcttcacagaccccacagggccaacaagctgtgtttcgtctcccc
gctgcagtctctctcacaggtggaacggtgccccagcagctccaggccatccaggtgcag
cccagcgctcagtccagctccatcaacactgatagcagcagccctgagatctcccaaact
agcaccgcctccacagccacagtcagtctccctgctactatcatcacatcatccgtgccc
acttctgtagcaggtcacatgatgtacccaagcccccatgcagtgatgtacgcctcggcc
cccacgttgaccgacggtggtctggctgtgctcaacgccttctcccagggcacctcggcc
atgcaagtgtcccatgcacaggcctcagatacaggtgctgttcctcaggtgttcctcaca
gcaccccctggcacggtgcagatccccgtttcagcggtgcagatacatccaatggtgatt
ggccagcagtccagcggcagtaacagtaacctgacagagcttcaggtagtgaatctggac
acaactcagagcagcaagaatgattga
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