Tachysurus fulvidraco (yellow catfish): 113661061
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Entry
113661061 CDS
T08119
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113661061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113661061
03021 Transcription machinery [BR:
tfd03021
]
113661061
Transcription factors [BR:
tfd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
113661061
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113661061
RNA polymerase III system
TFIIIB
113661061
RNA polymerase I system
SL1/TIF-1B
113661061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
113661061
NCBI-ProteinID:
XP_027030807
LinkDB
All DBs
Position
4:18760518..18766621
Genome browser
AA seq
303 aa
AA seq
DB search
MEQNNSLPSFPQSIASPQGAMTPGPPIFSPMMPYGTGLTPQPVQNTNSLSILEEQQRQQQ
QQQQQAASQQQVGIVVTSGQTPQLYHTQVVSTTTALPGNTPLYTTPLTPMTPITPATPAS
ESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSS
GKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLT
HQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFR
KTT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagcttgccttccttcccacaaagcattgcatcgcctcagggggcc
atgacacctggtcctcccatctttagccctatgatgccatatggtacagggcttacacca
caaccagtacaaaacaccaacagcctttcaatcttggaggagcaacagaggcagcagcaa
cagcagcagcagcaggcagcttcccaacaacaggttgggatagtggtaacatcaggccaa
actcctcagctgtatcacacacaagtggtttctaccaccacagcactgccaggaaacacc
ccactctacacaacccctctaacccccatgacccccatcactcctgccacacctgcatca
gaaagctctggcatcgtccctcaacttcaaaatattgtatcaactgtgaacttgggatgc
aaacttgacctgaagacaatagcactgcgagctaggaatgctgagtacaatcctaagcgt
tttgctgctgtcatcatgagaatacgtgaaccaagaacaactgctctgattttcagttca
ggcaagatggtctgcacaggagcaaagagtgaggagcagtctcgtctggccgccagaaaa
tacgcaagagtagtgcagaaactcggtttccctgccaaatttctagactttaagattcag
aacatggttggaagttgtgatgtcaagttcccaatacgactggagggccttgttctcacc
catcagcagttcagcagttatgagccagagttattccctggtttaatctacagaatgatt
aagcccagaattgtgcttttaatatttgtttcaggcaaagttgtactcacaggtgcaaag
gtgaggggtgaaatctatgaagcatttgaaaatatatatccaatcttaaaaggattcagg
aaaacgacataa
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