KEGG   Tachysurus fulvidraco (yellow catfish): 113661114
Entry
113661114         CDS       T08119                                 
Symbol
col17a1b
Name
(RefSeq) collagen alpha-1(XVII) chain
  KO
K07603  collagen type XVII alpha
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    113661114 (col17a1b)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 113661114
NCBI-ProteinID: XP_027030901
LinkDB
Position
4:complement(18531792..18553977)
AA seq 1505 aa
MDFLTRQTEDSRGSPGDRVITETISTTRLTSLPPKGFSGSSSKSMSNSSWGSSFEKNILN
HNSSTNSYLPSSSVSVNAGGSGLDYALLLGDDYTGSSRSGGGRGGSTGIESVSGKESGLK
SRSSSSGLRRTQGSSSSINHSPILLERKTTLSHSGGYDGSSSANSSPELTRKDYGSSRGR
SQNRESEIRVRLQSASPSTKWTELEDVKKLVKSGRSSSVSPTRSTASSTLPVPRKAKVET
KIIKQGSQTASGQYDTTILDSALPSYTWTSSTLPSNASGNSAFAYQSSTNNMSPGSSLLN
TTSPSSLSVYGFQNNLATPSGTLLTSNTVNTHSGYGVQKNISQSIGSSGVVSTGVSTSTD
TTTHSVKDDMRRKYIILEKENVPSKKETEVLVLSKDSGKQFSSTSYGKGGSVSDISLKKE
AVASSYPETSPVKLSSSSYYGSSSAPTKDKATYAEIYKEKNGGKGGGGCFDCGPSCCSWW
KWLLGLLLSLLLLLGLLFGLIALAEDMRKMKERVDALQNLVQGRFKAQTNRLTGQNIHNQ
RSAYMDMENDLATSDNTVNLGAATSSDSASLRTIQNLLQTELQSETFRASLASTLKGERG
LAGPKGETGAQGPKGDSGFPGIPGSPGAIGHPGPEGPKGQKGSAGEHGGEGPPGIRGRDG
LPGQRGEPGPAGAGEKGERGSSGEPGARGFPGSPGPPGPKGSAGLNGLMGAAGEPGSQGF
RGEAGPAGPKGDRGPQGQQGIKGDHGEKGDPGVPGFPGAPGKPGTNGEKGSRGSTGTSGA
DGEKGQRGDQGPIGMPGIRGPAGPPGDAGSQGPPGLQGPPGIAGLPGQPGVKGENGEPGR
VINAAGYSSVAIPGPPGPAGPPGPAGPPGLSGPVGPAGIPGQAGPKGEKGDQGEAGITVE
RTETSVRGERTYGSLDATQVIQGPPGPPGPPGPPGAPGYGTPGPRGEKGVKGEQGSFVPN
SGTFFAGPPGPPGPSGPKGDTGPQGPRGYQGDPGQPGLPGRPGGSEIRNSGVQGPPGPPG
PQGLPGQQGPKGDSGIPGAPGIPGTSRGSGSVGVSGQPGPPGPPGPPGSPGHSISTTDYR
RYIIDFMQSDSMRQHLSSIQGPPGPPGASVSVEDVASRVIAYIQRSGLTGSPGPPGPAGS
VSVSDIIALLQRDDVRRYVTGPPGPPGPSGSINLGNFDTQEVANYVLRLMSDRGLTSRSG
LPGPPGPPGPPGQPGSTYSDITALIERSGLRAGLQGPPGPPGRQGLPGPVGPPGAPGSSS
SGYRFEDIQAYIQNSGLRGAQGPPGPPGPQGPAGDSRALDRASQRANIRAELQEYLSSDA
MRRYSSILPGPPGPPGPRGEKGDRGESGYSAGGGYYYSPDRNGVRLAETDYSNVAQKVTD
YIRSQGVLQEMNDNYWQSHFHGIQGPPGPAGPPGQPGYSRVFSTYGNITADLMDFFRTHG
TIPGPPGRQGHKGEIGYPGPKGEKGEMGRQGTPGVQGPRGPEGPRGQKGEKGEIQIGRRR
RSLGV
NT seq 4518 nt   +upstreamnt  +downstreamnt
atggatttcttaacaaggcaaacagaagattcacgaggaagtccaggagacagagttata
actgaaaccatatcaacaaccagactcacatcattaccaccaaagggcttcagtggatct
agcagtaagagtatgagtaacagctcttggggaagcagctttgagaagaatattctaaac
cacaatagtagcaccaattcctacttgccttcctcctcagttagtgtaaatgctggggga
tcagggttagactatgccctgttactgggagatgactacactgggagcagcaggagtgga
ggaggacgcggaggcagtacaggaattgaaagtgtttctggaaaagagtctgggttgaag
agcaggtccagctcatcgggcttgagaaggacacaaggttcatcctcctctattaaccac
tctcccattttattggagagaaaaactaccctcagtcactcagggggttatgatggaagt
tcaagcgccaattcatcaccagagctcacgaggaaggactatggctcatctagaggaaga
tcccaaaacagagagagtgagatcagggtcagattacagagtgcatctccatcaaccaaa
tggacagagctggaagatgtgaagaaattagtgaagagtggacgatcgtcaagtgtcagc
cccactcgctccacagcctcgtccactctgcctgttccacgcaaagctaaagtcgagacc
aaaatcatcaaacaaggcagtcaaactgcctcagggcagtatgacaccactattctggac
tcagcacttccatcgtatacatggaccagctccacactgccctctaatgcttctggcaac
tctgcgtttgcttatcaaagtagcaccaataacatgtcaccaggatcttctcttttaaac
accacttcgccatcctctctatcagtgtacggtttccagaataatcttgccacaccatct
ggtacacttctcacatcgaatacagttaacacacattcaggatacggtgtgcagaaaaac
atttctcagagtattggtagctctggcgttgttagtacaggagtttctacttctacagac
acaactacacactccgttaaagatgacatgcgacgaaaatatattatacttgagaaggag
aatgttccttcaaaaaaagagacagaagtgcttgttctgtcaaaggacagcgggaagcag
ttctccagcacatcgtatggaaaaggagggtctgtttcggacatctcactgaagaaggag
gctgtagcaagcagctaccctgagacatctcctgtcaaattaagttcaagctcctactat
ggatcttcatcagcccctactaaagataaggctacatatgcagagatctataaggagaag
aatggtggaaaaggaggaggcggttgttttgactgtggtccgagctgctgctcctggtgg
aagtggctgcttggactgctgcttagtcttctgctgctcctcggccttctttttggactt
atcgctctcgctgaggacatgagaaagatgaaagagcgtgtagatgctcttcagaacctg
gttcaaggcaggttcaaggctcaaactaatcgcctgactggacagaacattcacaatcaa
aggtcagcatatatggacatggaaaacgatctggctacttctgataacacagtgaacttg
ggagctgctacttcctcagactcggcatccctgagaacaatacagaaccttctacaaacc
gagctgcagtctgagactttccgagctagccttgcttccacactcaaaggagaaagagga
ctggcagggcctaaaggtgaaactggagctcaaggacccaaaggggatagcggtttccca
ggtataccaggttctccaggggcaataggacacccaggacctgaaggaccaaaaggacaa
aagggaagtgcaggcgagcatggtggagaggggccaccaggaatcaggggccgagatgga
ttaccagggcagcgaggagagccaggacctgcaggtgctggagaaaagggtgaaagaggc
tcttctggagaaccaggcgctcgtggctttccaggttcacctggtccaccgggtccaaaa
ggttcagcaggtcttaatggtttgatgggtgctgcaggtgaacctggttcacaaggtttc
agaggagaagcaggacctgcaggacctaaaggggacagaggacctcaaggacaacaagga
attaagggtgatcacggtgaaaagggagatcctggtgtgccaggtttcccaggggctcca
ggaaaaccaggaactaatggtgagaaaggatccagaggatcgacagggacttcaggtgca
gatggtgaaaagggccaaagaggtgaccaaggtccaattgggatgccaggaatcagaggc
ccagctggaccacctggtgatgctggatctcaaggaccaccaggacttcaaggacctcca
ggcattgcaggacttcctggacagcctggagttaaaggtgaaaatggtgaacctggcaga
gtaatcaatgcagctggctacagctctgtggcaattcctggacctccagggccagctgga
ccacctggacctgctggacctccagggctgtcaggccctgttggtcctgctggaattcct
ggacaagcaggtcctaaaggtgaaaagggtgatcaaggagaggctgggatcacagtggaa
agaacagagacctcggttagaggagaaagaacctatggttcattagatgctactcaagtt
attcagggaccacctggaccacctggtccccctggacctcctggagctccaggatatggc
acacctggcccgagaggagagaaaggagtgaagggagagcaagggagttttgtgcccaac
tcaggaacattttttgctggaccaccaggaccacctggaccttcaggtcctaaaggagac
acaggacctcaaggacctagaggatatcaaggtgatcccgggcagcctggcctacctgga
aggccagggggatcagaaatcagaaactctggagttcaaggaccacctgggccacctgga
cctcaagggctgccaggtcaacagggccctaaaggggacagtggcattcccggtgcccca
gggatcccaggaacatcaagaggatccggttctgtcggggtttcagggcagcctgggccc
ccagggcctccaggaccacctggatctcctggacactccatatctacaacagattatcga
cgttacattattgacttcatgcagagtgacagcatgaggcagcatttatctagtatccag
ggcccacctggtcctcctggggcctcagtgtctgttgaggatgtggcatctcgggttatt
gcatacattcagcgctctggattgactggatcccctggtcctccgggtcctgctggctct
gtatctgttagtgatatcattgcattattacaaagagatgatgttaggcggtatgtaact
ggccctccaggaccacctggcccttcaggaagtataaatctgggcaactttgacacacag
gaagtggcaaactacgttctgagattaatgagtgatcgagggttgacaagtagatctgga
cttcctggtcctcctggaccacctggtccacctggccagccaggctccacctacagtgac
atcactgctttgattgagaggtcaggtcttagagcaggtcttcaaggtccccctggtcct
ccaggaagacaaggcctacctggtccagttggtccccctggagcccccggctcttcaagt
tcaggatacagatttgaagacatccaggcctacatacaaaattctggcttacggggtgcc
cagggtccacctggccccccgggacctcaagggcccgcgggagactctagggcacttgac
agagccagtcagagagcaaacattcgtgctgagcttcaggagtatctcagtagtgatgct
atgcggcgttatagctcaattcttcctggacctcctggtcctccaggaccccgtggtgaa
aaaggggaccgtggtgaatctgggtacagtgcaggcggtggctactactattctcctgac
cgtaatggagtcaggttggctgaaacagactactccaatgttgctcagaaagtcactgac
tacattcgaagccagggtgtactgcaggaaatgaatgacaattattggcaatctcatttc
catggaattcaaggtcctcctggtcctgctggtccacctggtcagcctggatacagccgt
gttttttctacctatggaaatatcactgcagatctcatggatttcttcagaacacacggt
actattcccgggccacctggtaggcaaggacataaaggagaaataggataccctgggccc
aaaggagaaaaaggggagatgggaagacaaggaacacctggtgttcagggaccaagaggt
ccagaggggccaaggggtcaaaagggtgagaaaggtgaaatccagattggtcgccgcaga
aggagtcttggtgtgtaa

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