Tachysurus fulvidraco (yellow catfish): 113661208
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Entry
113661208 CDS
T08119
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113661208 (robo1)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
ROBO family
113661208 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_5
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
113661208
NCBI-ProteinID:
XP_047676560
LinkDB
All DBs
Position
11:22573667..22869096
Genome browser
AA seq
1673 aa
AA seq
DB search
MWTQRFILFNGLLFWSLVVSPHSSLQVLVPVLLPTDSGPAEAAEERVTPAPASGHDEDNT
LAYTGSRLRQEDYPPRIVEHPSDLIVSKGEPATLNCKAEGRPIPTVEWYKDGERVETDRD
DTRSHRMLLPTGSLFFLKIIHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFR
QNPSDVMVAAGEPAVMECQPPRGHPEPTISWKKDGMNVDDRDERITIRGGKLMITNTRKS
DAGKYVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVEQSVEFRCEAQGDPVPTV
RWRKEDGDLPKGRFEIRDDHTLKLKRLSSADAGSYTCLAENMMGKAEATATLTVHVMSVP
PVFAVRPRNQVVGLGRTVTFQCEATGSPQPAIFWQREGSQNLLFSSQPPQSSSRFSVSQT
GDLTITGLERGDSGYYSCQALNIAGSVITKALLEVTDIISDRPPPVIRQGPTNHTVPLDS
TVVLGCRATGSPSPTIMWKKDGVLVSAHDSRFKLLDSGGLQIRYAKLGDTGVYTCVASSP
SGEASWKAYLEVQEFGIGVQPGRPTDPNLIPSAPSKPEVIDVTRTTVSLSWKPDLHSGAT
PTSYIIEAFSHAAGSSWHTLAEHVRTESYVLKGLKPSAVYLFLVRAANAYGLSDPSPISD
AIKTQEIPPTSQGVEHGQIQRELGDVVIHLHNPTILSSSSIRVQWTVEQQSQYMQGYKVM
YRVSSESGQTRSDWTMYEVRSPAEYTAVITQLRKGTTYEFKIRPFFNEFQGTDSDIKVGK
TLEEAPSAAPRDVTVTQSRDNSTAILLSWQAPREDERNGMVQEYRIWCLGNETRYHVNRS
VDGNTFSAVISGLVPGIRYGVEVSASTGAGPGVKSDITYFQLDSSGKMVQPVVDAEDTIS
QQISDVVKQPAFIAGIGAACWIILMVFSVWLYRHRKKRSGLSTSYAGIRKVPSFTFTPTV
SYQRGGEAVSSAGRPGLLNVSDSATQPWLADTWPNNCSNQNDCSINCCTGSNGNSDSNLA
TYSRPADCIANYNQMDSKPSNLLAPDSSLYGDVDISNKINEMKTFNSPNLKDGRSVGPVG
QPTPYATTQLIQSSMGSNHMGGTDLNEKQSWKSCQGMPQKQEVTSQLQYSIMEQNKLNKA
SDHYRSGDSTMPATIPYNQAPDPNPNAGSYSSSDRGSSTSGSQGQKKGGRIAKAPKQSAM
NWTDLLPPPPISPPPCQDYGISMDDSYEAELQCPIPPSRMYLQPDELEEEEADLERGPTP
PVRGTASSPAAVSYSHQSTATLTPSPHEEMQPMLMENPENNHERRRQLVSPPPPPRPVSP
SHTYGYISGPLGLDTDDLEDDEEADETDADVPLVHQRYPHVLIPAHQHSAHPRLTLRGLD
QTPASSTCELDSSVTGSMINGWGSASEEDSGSSGRSSVISSSDGSFFTDADFAQAVAAAA
EYAGVRVTKHSGKGLPHSHYTGPGARKYQNLPSGHRPASPFSTDSNMSAAVVQKRPPKKQ
KQQAAGHYQRREAYTDDLPPPPIPPPAMLKSPTHPAKAAAETGRRSSSAESRDKRDKKPR
DATDTRTSSSERREAQERQRAQRTGKSNKPEPSTGRQDPEDIVPYSRPSFPGVHHPRGDR
DPSSSSSVSSRGSGGRRRGEGVSGSRRNPAEISLNTIGAFQPGEEEQLEMAES
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgtggacacaaagattcattctctttaacggacttcttttctggagtctggttgttagc
cctcactcttctctgcaagtcttagtccctgtgttactcccaacagactcgggccctgca
gaggcggctgaggaaagggtcacgccggcccccgcctcgggacatgatgaagacaacacc
ttggcatacacaggttctcgtctgcggcaggaggactacccgcctcgcatcgtggagcat
ccctccgacctgatcgtgtccaagggcgaacccgccaccctcaactgcaaggccgagggg
cgacccattcccaccgtggagtggtacaaggatggcgagagggttgaaacggaccgggac
gacacgcgttcccatcgcatgctccttccaaccggttcactgttcttcctgaaaattatt
cacggccgccggagcaaaccggacgaaggctcgtacgtctgcgtcgctcgcaactacctc
ggggaagccgtcagccacaacgcatcgctggaagtagccattctccgtgatgacttcagg
cagaaccccagcgatgtgatggtggcagccggagaaccggcggtgatggagtgtcagcct
ccgcgtggacacccggaacccaccatctcctggaaaaaagacggcatgaacgtagatgac
agagatgaacgtataacaatccgaggcgggaagctgatgatcaccaacacgaggaagagc
gacgcagggaagtacgtgtgtgtgggaacgaacatgatgggagaacgggagagcgagatc
gccgagctcactgtgctggagcgacccagtttcctgcgcaagccgagcagtcagtcggtt
ctggtggagcaaagtgtggagttcaggtgtgaggctcagggagaccccgtccccaccgtc
cgctggaggaaagaggacggagacctgcctaagggacggttcgagatccgtgatgatcac
acactgaagctgaagaggctgagctcggccgatgccggctcctacacctgcctggcggag
aacatgatggggaaggcagaagccacggccaccctcaccgtccacgttatgtctgtgccg
ccggtgttcgcagtgcggccgaggaaccaggtggtggggttgggacgcaccgtgacgttt
cagtgcgaggcgacaggaagcccacagccggccatcttctggcaacgagaggggagtcag
aacctgctgttctcctcccagcctcctcaatcctccagccggttctccgtgtctcagacc
ggtgatctgaccatcacgggactggagcgaggagacagcggctactacagctgtcaggcg
ctcaatatcgcagggagtgtgatcactaaagctctgctggaggtcacagatatcatttca
gaccgccctccacctgtcatccgtcagggacccaccaatcacacggttccgctggacagt
acggtggttctgggctgcagggcgacaggaagtccttcacccaccatcatgtggaagaaa
gatggagttctggtgtctgctcatgactcccgctttaagctgctggactctggaggtctg
cagatccgatatgccaagcttggagacacgggtgtgtatacatgtgtcgcgtccagtccc
agtggagaagcatcatggaaggcctacctggaagttcaagagttcggtataggagttcag
cccggccgacccaccgacccaaacctgatacctagcgctccctccaaacccgaggtcatt
gatgtcactcgcaccaccgtgtctctgtcctggaagcctgaccttcactccggagccacg
cccacctcatacatcattgaggccttcagtcatgcagcaggcagtagctggcacacgcta
gcagagcatgtgaggaccgagagctacgtgctgaagggtctgaagcccagcgccgtctat
ctcttcttggtcagggcggctaacgcatatggcctgagtgacccgagtcccatcagcgac
gccatcaaaacacaagaaattcctccaaccagtcagggagtggagcacgggcagatccag
agggagctcggagatgtcgtcatccacctccacaaccccaccatcctttcatcctcctcc
atccgtgtgcagtggacagtggagcagcagtcccagtacatgcagggctataaggtgatg
taccgcgtgtcgtccgagtcggggcagacgcggagcgactggaccatgtatgaggtcagg
agtcctgccgagtacacggccgtgatcactcagctccgcaaaggcaccacctacgagttc
aaaatacgacccttctttaacgagttccagggcaccgacagcgacatcaaagtcggcaag
acgctggaggaagcccctagtgcagcgcccagagacgtgactgtcacacagagcagagac
aacagcactgccatcctgctctcctggcaagcacctcgtgaggacgagcgcaacggaatg
gtccaggagtacaggatctggtgtttgggcaacgagactcgttaccatgtcaaccgcagc
gtggatggcaacaccttctcagcggtgatctcgggtctggttccgggcatccgttacggc
gtggaggtgtcagccagcaccggagctggaccaggagtgaagagtgacatcacctacttc
cagcttgactcctcagggaagatggttcagcctgtcgtggacgcagaggacaccatttct
cagcagatctcagatgtcgtgaagcagccggccttcattgcagggatcggcgcggcgtgt
tggatcatcctcatggtgttcagcgtctggctgtaccgccatcgcaagaaaaggagcggg
ctgagcaccagctacgccggcatccgcaaagtgccatcgttcaccttcacgcctacagtt
tcctatcaaagaggaggggaagctgtgagcagtgccggcagacctggcttgttgaacgtt
agcgactcggctacgcagccctggcttgcagacacgtggcctaacaactgctccaaccag
aacgactgcagcatcaactgctgcaccggaagcaacggcaacagcgacagcaacctggcc
acctacagccgccctgctgactgcatcgctaactacaatcagatggacagcaaacccagc
aacctcctggcgccagattcgtccctctacggagacgtcgacatctccaacaaaatcaac
gagatgaaaacattcaacagccccaacctgaaggatgggaggtcggtgggacctgtgggc
cagcccacaccgtacgccaccacccagctcattcagtccagcatgggctccaaccacatg
ggcggcaccgacctcaacgaaaaacagagctggaagagctgccaggggatgcctcagaaa
caggaagtgacctcacagctgcagtacagcatcatggagcagaacaagctgaacaaggcc
tcagaccactacagaagtggagacagcaccatgccggccaccatcccatataaccaagcg
cccgatcccaatcccaacgccggctcctacagcagctccgaccgaggcagcagcacatcc
ggaagtcaggggcagaaaaaaggggggcgaattgctaaagcaccgaagcagagcgcaatg
aactggactgacctgctgcctcctccacccatcagcccaccaccctgtcaggactacggc
atttcgatggatgacagctatgaggcagagctccagtgccccatccctccatctcgcatg
tacctacagcctgatgagttagaggaggaggaagcagatctggaacgaggccctactcca
ccagttcgaggaacagcgtcctctcctgccgctgtatcctacagccaccagtccaccgcc
accctcacgccttccccacatgaagagatgcagcccatgctcatggagaacccagagaac
aaccatgagcgcagacggcagttagtcagccctcctccgccaccacggcctgtctcaccc
tctcacacatacggctacatctccggccccctgggtctggacactgatgatctggaggac
gacgaagaagcagatgagacagacgcggatgtgccactggtccaccagagataccctcat
gtgctcattcctgcgcatcagcacagtgcccatcctaggctgacgttgcgcggactggat
cagacgccagcctccagcacgtgtgagctggacagctcggtaaccggttccatgatcaat
ggctggggctcggcatccgaggaagacagcgggtcatctgggcgctccagcgtcatcagc
tcatccgacggttccttcttcaccgatgcagactttgcacaggccgtggctgccgctgca
gagtatgccggggtccgggtcacaaagcattctgggaaggggttgcctcactcacactac
actgggccaggagcacggaaataccaaaacctgccctcaggtcatcgcccagcaagtccc
ttttctacagatagtaacatgagtgcagctgtggtgcagaaaagacctccaaagaaacag
aaacagcaagcagctggacactaccagcgacgagaggcttacacagatgaccttcctcca
ccacccatcccgcctccagccatgctcaagtccccaactcacccagccaaggcagcagca
gagacgggaaggaggtccagctcagccgagagcagagacaagcgagacaagaagcccaga
gatgccacggacacgagaaccagctcgtcagagcgtcgagaagcccaagaaaggcagagg
gctcagagaactgggaagtccaacaaaccagagccgagcacaggacgtcaggacccagag
gatatcgtgccctacagtcgaccctctttcccaggtgtccaccatccccggggtgacaga
gacccgagctcctccagctccgtgtcatcgcgaggttctggaggccggaggagaggcgaa
ggagtctctgggagccgcaggaatcctgcagaaattagcctcaacaccataggagccttc
cagccaggagaagaggagcaactggagatggccgagagctga
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integrated database retrieval system