Tachysurus fulvidraco (yellow catfish): 113661309
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Entry
113661309 CDS
T08119
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tfd01100
Metabolic pathways
Module
tfd_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
113661309 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tfd01003
]
113661309 (csgalnact1a)
Enzymes [BR:
tfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
113661309 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
113661309 (csgalnact1a)
Glycosyltransferases [BR:
tfd01003
]
Glycan extension
O-Glycan
113661309 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Dna2
DLP_helical
DivIC
TetR_C_27
Csm1_N
Motif
Other DBs
NCBI-GeneID:
113661309
NCBI-ProteinID:
XP_027031171
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All DBs
Position
20:complement(17902005..17935319)
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AA seq
539 aa
AA seq
DB search
MLRRGLFLWLSRVCGILVLVCCLLSLLYVITCNPHSDDPLVAPRLGVPGSPRGLGVPGVL
SGAPLGSSSHETYQALLQEHEEQQRQHISSLKKQIAELKEALQERVEQPKEIQEKVSNTG
TDLNEFLRSQLGRAEISTGVRLPNEYAVIPFESFTLQRVYQLETGLTRHPEEKPARKDRR
DEINEVVESAVHTLNSHKHNMGDKFSADKVYSMADFIEGLARTEKDKGTLYELTFRGDRK
NEFRRLILFRPFGPLMKVSNERVATSHTGINIIVPLSQRADKFKQFMHTFREVCIKQDGR
VHLTVVYFGQDQMNEVKVILENTSRELNFRNFTMIHLNEEFSRGRGLDVGARAWKGGNVL
LFFCDVDIVFTADFLNSCRLNTQPGKKVFYPILFSQYNPAVIYGGSDHIPPVEQQLVIKK
DTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGEDVHLYRKYLHSNLLVIRAPSRSLF
HLWHEKHCADELLPEQYKMCMQSKAMNEASHGQLGMLLFRHEIEAHLRRQKQRSIAKNA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtagaggattgtttttgtggctctcacgagtctgtggcattttagtccttgtt
tgctgccttctttctctcctctacgtcatcacttgcaaccctcatagcgatgaccccttg
gtggcacccaggctgggagtaccaggctctccacgagggctcggggttcctggtgtgctc
agtggtgcccccttgggttcatcaagtcatgaaacctatcaagctttgcttcaggaacat
gaggaacagcaacgccaacacatttctagcctgaagaagcaaatcgctgaactgaaggaa
gctctgcaggagcgagttgagcaaccaaaggagattcaggagaaagtgagcaacacaggg
accgatctgaacgagtttctccgctcccagctgggccgggcagagataagtacaggtgtc
cgcttgccgaatgagtatgctgtgataccgtttgagagcttcacactgcagcgtgtctat
cagctggagacgggactcacgcgtcatcctgaagaaaagccggcaaggaaagacagacgc
gacgagattaacgaagtggtggagagcgctgtgcacacactgaactcacacaaacacaat
atgggagataaatttagtgcagacaaggtgtacagcatggctgacttcattgaaggttta
gcacgaacagagaaggataaaggaacactgtatgaactgacgttccgtggagatcggaaa
aacgagttcaggcgcctcatcctgtttcgtcccttcggaccattaatgaaggtgtcgaac
gaacgcgtggcaacatctcacaccggcattaacatcatcgtacctctttcccaaagagct
gacaaattcaaacaatttatgcacaccttcagggaggtgtgcataaagcaagatggaaga
gttcacctcaccgttgtctactttggccaagaccagatgaacgaagtcaaagtaatccta
gaaaacacatccagagagctgaatttccgtaactttaccatgatccacctgaacgaggag
ttttcccgcggccgaggtctggacgtgggtgcccgagcatggaaaggaggaaacgttttg
ctgttcttctgtgacgtcgacatcgtttttactgctgactttctgaacagctgccgcctg
aacacacaaccaggaaagaaggtgttttatcccattctgttcagccagtacaatcctgca
gtgatttatggaggtagcgatcacatcccgcctgtggagcaacagctggtgattaagaaa
gacaccggcttctggcgggactttggtttcgggatgacctgtcagtacagatccgacttc
atcaacataggtggatttgatgtggatattaaaggatggggtggtgaggatgtgcacctc
tacaggaagtatctgcacagtaacctgctggtgatccgtgctccttctcgcagtcttttc
catctgtggcacgagaagcactgtgccgacgagctcctgcccgagcagtacaagatgtgc
atgcagagcaaagctatgaacgaagcatctcacggacagctgggaatgctgcttttccga
cacgagatcgaagctcacctgcgcagacagaagcagcgcagcatcgcaaagaatgcctaa
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