Tachysurus fulvidraco (yellow catfish): 113661334
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Entry
113661334 CDS
T08119
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113661334 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113661334 (spata13)
Membrane trafficking [BR:
tfd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113661334 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
113661334
NCBI-ProteinID:
XP_047664519
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All DBs
Position
25:complement(15482021..15502909)
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AA seq
1255 aa
AA seq
DB search
MRKTLHADGASAQGKMSLGYPSIANGASVDHHTEATVTLSCSSFEPKKRENSGAPVRPVH
PEACCEKRGLNGTNHYQWSNPSIVDAQDISHPTKNVRIFSFQRKCGGAGPEKTPLRGPGL
HFMGSFKKLRSSVLQGIQNRGGVTVDNREKDEESNGFFVTKRNFGSGQTNGKEMITVSNG
VSPTVPRTCVLDVEDDDEEDGCGLQRNSHFSRSIRRAYGAGRISLMDNGRKQIESPSAEE
PASRSRPCSTVESIEPNDIFDTDVNALSRLSKSADNLHVYKSPFKRKVPSTQTQNLEDPS
TKNFQRTSSASSVVMQDCVSSQCRGVTGVRGKMLKLVGSLTDLSANRKPNSDPTSTAALS
ALSQLHDEYSRRTPCVPASERQRRPPPPNTGTKVQADVHNHSPLIPADAVGHVTVNSSDL
QVPRCSTATAQVPGSFVQLPVSSTSCSDISITHSTGNCGNVEEEQSLKIDVIQDEQCTSP
GHEQRLDSIKVNLECIWKTLERESEHLETPSGAPSFTDAVKENDEKYGDSVFVSPPVTPT
CASASPLATAPTSPASSCDTPLVSVPRRSTNRNRPRPISDYGQLVCRKYAVPKEEVELQG
DAQEERNAPDAHAEPHNRETGCENGHVDSRRRRPISMIGGVDLFASPDEKEDADLPTPVV
RPPVPSHGVPPYRAVSARLRPCVFSQSTPTGLDRVGWRKPRRVLSDGSSGPDDCVSEEDG
SFDELTEGTPYLQPEVDLSTLNQYISSGHVVYAEALWDHVTMGEQELAFKAGDVIRVLDA
QEKEWWWGLVGERQAWFPSSFVRVRVNQEDSPGDGVENSPEQQEALSKEPRSQTSEHREQ
MRANVVQEIMNTERVYIKHLRDICEGYIRQCRKHPGMFTDTQLKTIFSNIEEIYKFQRKF
LKDLERNYDKENPHLSEIGSCFLQQGEGFSIYSEYCNTHPAACTELHRLMKQGRYKHFFE
ACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKGHSDYAGVCKAHEAMKNVAS
LINERKRRLESIDTIAHWQEAIVHWEGEDVLSRSSELIHSGELTRVVRAGKTQQRSCFLF
DHQLVFCKKDVLWRDLLHYRGRLSTDILVPLDLPDGRHQDLGTLRNAVALRNHDTLEVLC
VLSCRKAQDKQLWLEAFSRERRRVKEDQEMGMEISETQRKQAIQNARKSKQGKIKNIKYA
GHPVSHHHQPLHPVHQRHITVPTSVPQQQVFSLAEPKRKPAHLWYTFTRNALFRK
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagactcttcacgcagatggagcctcagctcaaggcaagatgtctttgggttac
ccatcaattgcaaacggagcttctgtcgatcatcacaccgaggctacagtgacgcttagc
tgcagctcctttgaaccgaagaagcgggagaattccggtgctcctgtgaggccggtccac
cctgaggcctgctgtgagaaacgtgggctcaatggcacaaaccattatcagtggtccaac
cctagtattgttgatgcacaagatatatcgcaccccaccaaaaacgtacgcatcttttcc
ttccagcgaaagtgtggtggcgcaggccctgaaaagacaccgctacgaggacctggtctc
catttcatgggttccttcaaaaagttgcgctcctctgttctccagggcatccagaacagg
ggaggtgtgacagtagacaatcgggagaaagatgaggagagcaatggtttctttgtaact
aaaagaaattttggaagcggtcaaaccaatgggaaggagatgataacggttagcaatggg
gtatctccaactgtaccaagaacatgtgttttagatgtggaggatgatgacgaggaagat
ggctgtggcttacagaggaactcgcacttctcgcggagtatacgtagagcatatggagca
ggacgcatctccctgatggacaacggaagaaagcagatagaaagtccgagcgctgaagaa
cctgcttctcgctctcggccctgcagcaccgtggaatccattgagcccaatgacattttt
gacactgatgtgaacgccttgagtagactaagcaaaagtgctgacaacttgcacgtatac
aaaagccctttcaaacgcaaagtaccctcaactcagacccagaacctggaagatccaagc
accaaaaatttccagagaacatccagtgcttcgtctgtagttatgcaggattgtgtatca
agtcaatgtaggggagttacaggggtgcggggaaagatgctcaaactcgtcggcagctta
acagatctgtctgccaaccgcaagccgaacagcgaccccaccagcacggctgccttgtcg
gctctcagccagctccatgatgagtattcccgcaggactccctgcgttcctgctagcgag
cgtcaacgcaggcctccaccgcccaataccggtactaaagttcaggctgatgttcataac
cactccccgcttatacccgcagacgccgtaggacacgttaccgttaattcctcggatctt
caggttcctcggtgttccacagccacagctcaggtccccggttcttttgtccagcttcca
gtgagctcaacttcgtgttcagatatttccatcacacacagcactggaaattgtgggaat
gtagaagaagagcaaagtttgaaaattgacgtaattcaggatgaacagtgcaccagtcca
ggacatgagcagagactggacagtattaaagttaacttagagtgcatctggaagactctg
gagagagagagcgaacatttagagacgccatctggagccccgtctttcacagacgccgtg
aaggaaaacgatgaaaaatacggcgactctgtgtttgttagtcctcctgtcacacccacc
tgtgcctcagcgtcgcccctggcgacagccccaacctcgccagcctcctcctgcgacacg
cccctcgtttccgtgcccaggaggagtacgaacagaaacagacctcgaccgatctcagac
tacggacagctcgtctgcaggaagtatgccgtccccaaggaggaagtggaactccagggt
gatgctcaggaggaacgtaacgctcctgacgcacacgccgagccgcacaatcgagagacc
ggctgtgagaatggacacgtggacagcaggaggaggagaccgatctctatgattggagga
gtggatctgttcgcatctccggatgagaaggaagacgccgatttgccaactcctgttgtt
cgaccccccgtaccctctcacggcgtgcctccgtaccgcgccgtgtccgcccgcctgcgt
ccctgcgtcttctcccagagcacaccgacaggcctggaccgagtgggctggcgcaaacca
cgccgagtcctcagtgatgggagctcaggccctgatgactgtgtgagtgaggaggacggc
agttttgatgaactcacagaaggaacaccgtatctgcagccagaggtcgatctgtccact
ttaaaccagtatatctcgtcaggacacgtcgtttatgccgaggctctttgggaccacgtg
acgatgggtgagcaggagctggccttcaaagccggggacgtcatccgggtactggacgcc
caggagaaagagtggtggtgggggctggtgggcgagcggcaggcctggttcccctccagc
tttgtgagagtgcgtgtgaatcaggaggactcgcccggtgacggtgtggagaactctccg
gaacaacaggaggctctttctaaagaaccacgcagccagacgtctgagcaccgagagcag
atgagggctaacgtggtccaggagatcatgaacaccgagcgcgtctacatcaaacacctc
cgagacatctgtgagggatatattcgtcagtgcaggaaacacccaggcatgttcacagac
acccaactcaagaccatcttcagcaacatcgaagagatctacaaattccaacgaaagttc
ctgaaggatctagaaagaaattatgacaaagaaaaccctcatctgagtgagattgggtcg
tgcttccttcaacagggtgaaggtttctccatatactcggagtattgtaacacacacccg
gcggcgtgcacagagctgcaccgactgatgaagcagggacgttataaacacttcttcgag
gcctgtcgcctcctgcagcagatgattgacatctccatcgctggcttcctgctcacgcct
gtgcagaagatctgcaaatacccacttcagctgggcgagctgctcaaatacacaccgaaa
ggccacagtgactacgccggagtgtgtaaagcccatgaggcgatgaagaacgtggccagt
ctgatcaacgagaggaagaggaggctggagagcatcgacaccatcgctcactggcaggag
gccatcgttcactgggagggtgaagatgtgctatcccggagctcagagcttattcattca
ggtgagctgacgcgtgtggttcgtgccgggaagacgcagcaacgcagctgcttcctgttc
gaccaccagctggtcttctgtaaaaaggacgtcctgtggcgggaccttctgcactaccgt
ggacgccttagcacagacatcttggtacctctggatctgcctgacgggcgtcatcaggac
ctgggaacgctgagaaacgccgtcgccctgcgtaaccacgacacactggaggtgttgtgt
gtgctgagctgtaggaaagcccaggacaagcagctgtggctggaggctttcagtcgagaa
cgcagacgtgtgaaagaggaccaggagatgggaatggagattagtgaaacccaaaggaag
caagcgattcaaaatgccagaaaatccaagcagggcaaaattaaaaatataaaatacgca
ggtcacccagtgtctcatcaccaccaacccttacaccctgtccaccagcgccacatcact
gtacccaccagtgtcccccagcagcaggtcttttctttagcagaacccaagaggaaacct
gcacatctgtggtacacgttcacgcgcaacgctcttttccggaaatga
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