Tachysurus fulvidraco (yellow catfish): 113661356
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Entry
113661356 CDS
T08119
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113661356 (smarcad1b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113661356 (smarcad1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HHH_3
CUE
T2SSK
Cac1_C
Motif
Other DBs
NCBI-GeneID:
113661356
NCBI-ProteinID:
XP_047660889
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All DBs
Position
20:18412024..18427975
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AA seq
933 aa
AA seq
DB search
MRNKDEPEILADCTDNTVPETPEAKRPSKPVAVKAPDPVLEDSSSDSDVEMSGSSMISLG
PGKTSGTSTLTALGTISFSDKEDEVTGVKTGTSHHEGQDQRTETKQKHSSSLKTSGNGDT
VCKRRQEEMCDNSTESNNSSKKRRESLTDDSADEGPEPSWKDQETMVKKLQHSFPNLNKE
ELRDVLHEHSWVIEDALEALRMFSEHVVECSSDDSDPEPPPSSERKSTNPTPNPSTSATK
QLPNRSLNGDRDARMSRRQLTREIQKQDSSSEDNASDFEASPGHLDLDSDSDEADEKLPR
LKSQILDFFQKATVDELTLIAGCSLKKAQKIIELRPYQKWNDLDDVLHRGNGLSAELLTG
CREVLREREVVQGLMVKCEEISRKMTELVQKGLGSMSQPHILNSTFELKPYQLIGLSWLT
LLHKNQLSGILADEMGLGKTIQVISFLAHLYQEGNRGPHLITVPSSTLDNWVRELNLWCP
SLKVLVYYGSVEERKCIRYEILNEEVDYNIIVSTYNLAIGNSNDRSLFRKLKLEYAVFDE
GHMLKNMSSLRYRHLMGINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIGKM
FSMKSSEEQSSFEKDRIAHAKLIMKPFILRRIKREVLKQLPAKEEQIEFCAMSEKQQQLY
DTLFSKLKTSSNTEKRELTNVMMQLRKMANHPLLHRQYYSSRRLSTMSRLMLKEPSHRDS
NPALIEEDMAVMSDFELHHLCQQYPTLHDHQLTTEQLLDSGKLHLLTPLLTDLKEQGHRV
ALFSQFTMMLDILEVLLKHHKHRYIRMDGSTPMSDRIVLIDQFNTDREIFVFLLSTRAGG
LGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRNVKVIKLISKDSIEDAMLRIGQR
KLKLEQDMTANEEGDEDTIPDDIASLLKATLGL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacaaagatgagccagaaattcttgcggattgtaccgacaacacagtaccagaa
acgcctgaggccaagcgtccatctaaacccgttgctgtcaaagccccagatcctgtactg
gaggactcgtcctccgattcggatgtggagatgtcaggaagctctatgatctcactgggg
ccggggaagacgtctgggacttcgacactgacagctctgggcacaatctccttctctgat
aaagaggatgaagtaacaggggtgaagacgggcacgtcgcaccacgaaggacaggatcag
cgaacggagaccaaacagaaacattcttcatctttgaagacatctggaaatggagataca
gtgtgtaaaagaaggcaggaggagatgtgtgacaattccacagagagcaataatagcagc
aagaagaggcgtgagtcactgacggatgattcggccgacgagggacctgagcccagctgg
aaggaccaggagaccatggttaagaagctgcagcatagttttccaaatctcaacaaggag
gagctcagggacgtgcttcacgaacacagctgggtcatcgaggacgccctggaggctctg
cgcatgttctctgagcacgtggtggagtgcagcagtgatgactctgaccccgaaccccct
ccgtcttctgaacgcaaaagcacaaatccgactccaaaccccagcacttctgcaacaaag
cagctaccaaacagatccctcaatggagaccgagacgctcggatgagtaggagacagctg
acgagagaaatccagaagcaagatagcagctcagaagacaatgcaagcgacttcgaggcg
tcccccggacatttagacttggactcggattcggacgaggctgatgagaagcttcccagg
ctgaagtctcagatcctggatttcttccagaaggccacggtcgacgagctgacactgatc
gctggctgctctctaaagaaggctcagaaaatcattgagctgaggccgtaccaaaagtgg
aacgatctggatgatgtcctacacagaggtaacggcctctctgcggagctgctcaccggg
tgtcgagaggtcctgagggagcgagaggtggtacaggggctcatggtcaagtgtgaggaa
atttccagaaagatgactgaattggtgcagaagggactgggatctatgagtcagcctcac
atccttaacagcacgttcgagctgaaaccgtaccagttgattggccttagctggctgacc
ctgctacacaagaaccagctaagcgggatcctggcagacgagatgggtttgggaaagact
atacaagttatctcttttctggcacacttgtatcaggaggggaacagagggccgcatctc
atcactgtgccttcatccacgctagataactgggttcgagagctgaacctttggtgcccg
agtttaaaagtgctggtttactacgggtctgtcgaggaacggaagtgcatccgctacgag
atcctgaacgaagaggtggactataacatcattgtctcaacatacaacctggccattggg
aactccaacgatcgcagcctgttccgtaaactcaagctggaatacgccgtttttgatgaa
ggacacatgctgaagaacatgagctcgctgcgctatcgccaccttatgggcatcaatgcc
aaatatcggctgctgctgactggaacgccgctgcagaacaacctgcttgagctgatgtct
ctgcttaacttcatcatgcccaacatgttctccagcagcacctcacagatcggcaagatg
ttctccatgaaatcctcagaggagcaaagcagctttgagaaggaccgtattgctcacgcc
aaactcattatgaaacccttcatcctgcggcgtattaaacgtgaggtcctgaagcagctg
cctgccaaggaggagcagattgagttctgtgccatgagcgagaaacaacagcagctttac
gacactctgttcagcaagctaaagacctccagcaacacagagaagcgagaactgaccaac
gtcatgatgcagctgaggaagatggccaatcacccgctcctgcaccggcagtattactcc
agcaggcgtctctccaccatgagcagactcatgctcaaggagccgagtcaccgcgactcg
aacccggctctgatcgaagaggacatggcggtgatgtccgacttcgagctgcatcatctg
tgccagcagtaccctacgctacatgaccatcagctgaccacagagcagctgctggattcg
gggaagctccacctcctcacacctctactgacagacctcaaagaacagggtcaccgagtg
gccctcttcagccagttcaccatgatgctggacatcctggaggtgctgctcaaacaccac
aagcacaggtacatccgaatggacggctccacaccaatgagtgacaggatcgtgttaatc
gaccagttcaacacggaccgggagatctttgtgttcctgctgtccactagagctggagga
ctcggcatcaacctgacctcagctaacgttgtcatcctgcatgacatcgactgcaatcca
tacaacgacaagcaggcagaggaccggtgtcaccgtgtcggacaaaccaggaatgttaag
gtgatcaagctgataagcaaagactccatagaggacgcaatgctccgaatcggccagagg
aaactcaaactagagcaggacatgacagccaatgaggaaggtgatgaggacaccattcct
gatgacatagcctcccttctcaaagctacattgggtctgtga
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