Tachysurus fulvidraco (yellow catfish): 113661361
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Entry
113661361 CDS
T08119
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113661361 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
113661361 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113661361 (lsm4)
03041 Spliceosome [BR:
tfd03041
]
113661361 (lsm4)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113661361 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
113661361 (lsm4)
Spliceosome [BR:
tfd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113661361 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113661361
NCBI-ProteinID:
XP_027031254
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All DBs
Position
2:complement(23741892..23745617)
Genome browser
AA seq
142 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGSMQQNKQQGKGRGGGAGRGVFGGRGRGMQ
GAGRGQQQDKKPGKPQGVKNQH
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactgtctttactgaaaacagcacagaaccaccctatgctggtggagctgaaa
aacggggagacctacaacggccatctggtcagctgtgacaactggatgaacattaattta
agagaagtcatctgtacctccagggacggagataagttctggaggatgcctgaatgctac
atccgaggaagcacgatcaagtacctgcggatcccggacgaaatcatcgacatggtgaaa
gaggaagtcgtgtccaagggccgtggccgtggcagcatgcaacagaataaacagcaggga
aagggcagaggaggtggagctggacgaggtgtgtttggtggccgaggaagaggcatgcaa
ggtgctggccgtggacagcaacaggacaaaaagccgggaaaaccacagggtgtcaaaaac
cagcactga
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