Tachysurus fulvidraco (yellow catfish): 113661362
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Entry
113661362 CDS
T08119
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfd03009
]
113661362 (ddx49)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113661362 (ddx49)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
90S particles
Helicases
113661362 (ddx49)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
113661362
NCBI-ProteinID:
XP_027031256
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All DBs
Position
2:complement(23746165..23751516)
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AA seq
460 aa
AA seq
DB search
MANFECLGLSEWLVNQCKQMGLTRPTPVQQNCMPAILEGRDCLGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRALGKPLGLRDCIIVGGMDMVTQGLELSRK
PHVVVATPGRLADHIRSSDTVDMKRLQFLIMDEADRLLEQGCTDFTKDLEVILNVVPAKR
QTLLFSATLTDTLQELKSIAMNKPFFWEHKSEVKTVEELDQRYILTPEKVKDAYLVNLIQ
KFQDEHDDWSIMIFTNTCKNCQILTMMLREFKFPAISLHSMMKQRQRFANLAKFKSNIFK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
NAIEEQIQAKLKEYPVQEKEVLKILTQVNVTRRQCEIKLEATDFDEKKEINKKKQMILEG
KDPDLEEKRKNELAKIKRAKKKFKGRIQESLQKKQGEGKC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctaattttgagtgtcttggcctgtccgagtggctggttaaccaatgtaaacaaatg
ggtctcactcgaccaacaccagtgcaacaaaactgcatgccagctattctggaaggtcga
gactgtttgggctgtgctaaaaccggaagcggcaaaacagcagcgtttgtacttccggtg
ctgcagaagttgtctgaagatccttatggaatcttctgcttggttttaacgcccacgagg
gaactggcttatcagatagctgaacagttcagggctttggggaagcctctgggactgagg
gactgtattatagttggaggaatggacatggtgactcagggtttggagctttccaggaag
ccacatgttgttgtggccacaccggggagattagcagatcacattcgaagttcagacacg
gttgatatgaagagactccaattcttaatcatggatgaggctgatcgtttgctggagcag
ggctgcacagacttcactaaggacctggaagttattctcaatgttgttccggcaaaacgg
caaacgctgctttttagtgcaacgctgacagacacactgcaggagctcaagagcattgct
atgaacaagcctttcttctgggagcataaatctgaagtgaagacagtggaagagcttgat
cagcgatacatccttacacctgagaaagtcaaagacgcgtacctggtgaacctaatccaa
aaattccaagacgagcacgacgactggtcgatcatgatcttcaccaacacatgcaaaaat
tgccaaatactcacaatgatgcttcgcgagtttaaatttcctgccatctccctgcactcc
atgatgaaacagagacagcggtttgcgaaccttgccaagttcaagtccaatatcttcaag
atcctcatcgccacagatgttgctgccaggggtttggatatacctacagtgcaggttgtc
atcaatcacaatactccaggattgccaaaaatctacattcacagagtcgggagaactgca
cgtgcaggaagaaatggtgtttctattacgctggtcacacagtatgacattcatttggtc
aatgccatcgaggagcagatccaggccaaactgaaggagtatccagttcaagagaaagag
gtgctgaagattcttacccaagtcaacgtcacgagacgacagtgcgagattaaactggaa
gcaacagattttgatgagaaaaaggaaatcaacaaaaagaagcaaatgattcttgaaggg
aaggaccctgatttggaagagaagaggaagaatgagcttgccaaaataaaaagagcaaaa
aagaaattcaaagggagaattcaggaatccttacagaagaagcaaggggagggaaaatgc
tga
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