Tachysurus fulvidraco (yellow catfish): 113661411
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Entry
113661411 CDS
T08119
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113661411 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113661411 (pex1)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
113661411 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_22
AAA_14
ABC_tran
AAA_18
AAA_28
TIP49
RNA_helicase
AAA_33
Bac_DnaA
RuvB_N
IstB_IS21
AAA_5
Sigma54_activ_2
DUF815
NACHT
AAA_24
AAA_7
AAA_29
KTI12
Parvo_NS1
AAA_23
ORC-CDC6-like
nSTAND1
APS_kinase
Motif
Other DBs
NCBI-GeneID:
113661411
NCBI-ProteinID:
XP_027031402
LinkDB
All DBs
Position
24:9070096..9080852
Genome browser
AA seq
1257 aa
AA seq
DB search
MLFSYGIQPVTLVFNNSKNCFLHLSPNLVSQLCLRESQVLELSWADGDKPLFLSWIRGAN
TLCSGQEDRVELSRQLGEKLGLLEGTQGFLRPCVQVHSVQQVFVEPLSSDDWEILELHCL
ALEQQLLDQIRVVFRDAVFPVWVDQYTVIYIRIVSFSPSVSFGRLEQFTELVVSPKLRPG
GTQFPHVPPDMEPKNQLLQRQQNTDLTSSSLGADSLPQSLTDQPACSQSHRGGMADLRSL
LKYLFLGKYEPAKDIPEVPIIPAVFQGCVLRVCGSPPAVISHLSSSHGGVHVFPWHQSDC
LSTAQPVLTYGRLSKIPSPKEVKEQAKQAMDKKKSSGSQTDTDTQEQAEESMVVRMICHN
RENLQLNQRSCKLGDLYSGRIWIPSRLRDRLSIDTHSAVKVCPMTCTPKVALAVSLQPVR
TLADGEIESEEDVQSAFLSWLHALSHQPLACLTARADLIVLQCTEGKSEFLLTVLKPEAE
PKQVDEIFLLSPGALYKADIQIIKEPHVSNHTVAHTADRSPFAGFPSLSTLGGMGDISIC
AFEHISHSLMGGPLSRELVSSGCGLQSGALLITGAKGSGKTSLAKALCMKAVEELDAHIE
VVDSKKLKGKRADTVRQRLEEVFEQAVWRQPSVILLDDLDHMAGAATTPEQEQGTEAVLH
HHIAQSLKDLVDEVVGRSSLVILLVTAQNEHRLHPVLTEVQGSHFFQSFCKIETPTQMQR
MDILRSLMSCKNIISGDSDILDLTDVAMKTEGYLPRDLNLLLDRAIHASAVHHRDNSNTQ
GLCLSSADLHHALQDFTPPSLWGVQLQVPSVAGMKQVGGLHQARQLLMDTILLPAKYPLL
FSSLPIRHRSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDV
FQRAQAAKPCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSR
PDLIDPALLRPGRLDKTLYCPPPDREARLEILKALTHNVPLAADVDLEQIAVATELYTGA
DLKGLLYNAQLEAIHSSLGPSMLAELGSGSDSEVSVSSLIFLNQSSGSDDSAGETEAGIE
TSAMALEHSEIPTEDLNHNIWRLYFGSSFELELGHHSPSELNSQCMSVPNSTTHELTGAS
VRDLTFLRGPVLMSSVQQGFQELNSEQSERLRADLNTIKSSYHRSPEDSSLGQTGPVKPA
VLICQSHLMSALANTRASISRQDWRRYTDLYESFGALREGKSQNAVLFTPGQRVTLA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgttattcagctatgggattcaaccagttacgctggtatttaacaactccaaaaactgc
tttctccacctgtcacctaacttagtctctcaactctgcctcagagagagtcaggtgttg
gagttgtcctgggctgatggtgataaacctctgttcttaagctggatcagaggtgctaac
acattatgttcagggcaggaggacagggtggagctcagcagacagctgggagagaagctc
ggattacttgaaggaacacagggcttccttaggccatgtgttcaggtgcattcagtgcag
caggtgtttgttgagcctctctcttctgatgactgggaaatcttggaacttcactgcttg
gctctcgaacagcaacttttagaccaaatccgagtggttttcagggatgcagtgttccct
gtgtgggtggaccaatacactgtcatctacattaggatagtatccttctctccttctgtc
tcatttggccgattggagcagttcactgagttggtggtctcccccaaacttcgacctgga
ggcacacaatttcctcatgttcccccagacatggaaccaaagaaccaacttctgcaaagg
cagcagaacactgacctcacatcctcctctcttggagctgactctcttccccaatccctt
acagatcagccagcttgcagtcagagtcatcggggtggaatggctgatctgaggagtctg
ttaaagtacttgtttttgggaaaatatgagcctgccaaggatattcctgaagttcctata
atccctgctgtcttccaaggttgtgttcttcgggtgtgtggatcgccgccagcagtgatc
agtcatctcagttcaagtcatggaggtgttcatgttttcccatggcaccagtcagactgt
ttgagtacagcacagcctgtattaacctatggcagactttcaaagattccctctcctaaa
gaagtgaaggagcaagccaaacaagcgatggacaagaaaaagagcagtggatctcagaca
gatacagatacacaggaacaagcagaagagtctatggtggttaggatgatttgccacaat
agagagaatctgcagttgaaccagagatcctgtaaactgggagacctttacagtgggagg
atttggatcccaagcagattacgagacaggttgagcatcgacacacactctgctgtgaaa
gtctgtcctatgacatgtacccctaaagtagcactagccgtttcactccagcctgtacgt
acattggctgatggtgagattgagagtgaggaagatgttcagtcagctttccttagctgg
cttcatgctctgagccatcagcctttagcttgtctcacggcaagggccgacctcatcgtc
ctgcaatgcactgaaggaaagtctgagtttctcttgactgtactgaaacctgaagctgag
ccaaagcaagtggatgagatttttctcttatctcctggagctttatacaaagcagacatt
cagattatcaaggagcctcatgtgtcgaaccatacagtggcacacactgcagacaggtca
cctttcgctggctttccttccctcagcacacttggtggcatgggggacatcagtatatgt
gcttttgagcacatctcgcacagtctgatgggaggtccactatcacgtgagctagtatcc
agtggctgtggcctgcagagtggagctctgctcatcacgggagccaagggcagtggtaag
acttctctagctaaggctctctgcatgaaagctgtggaagagctggatgcccacattgag
gtagtggactccaagaaacttaaaggtaaaagagcagacactgtgaggcagagactggaa
gaggtttttgagcaggctgtgtggagacagccgtcagtgatcctgttggatgacctcgat
cacatggccggagcagccaccacacctgagcaggagcagggcacggaggcagtgctgcat
caccacatcgcacagagccttaaggatttagtagatgaagtggtgggacgctccagtttg
gtgattctgctggtcacagcacaaaatgaacaccgtcttcatccagtgctgactgaagta
cagggttcacacttctttcagagcttttgtaagatcgagacaccaactcagatgcagaga
atggacatcttgaggtcactaatgtcctgtaaaaacatcatatccggagactcagacatt
cttgatctgactgacgttgccatgaaaaccgagggctatcttccacgcgatctgaacctt
ttacttgaccgagccatccacgccagtgctgtacaccatagagacaacagcaacactcaa
gggttgtgtttgagcagtgcagacttgcatcacgctctgcaggatttcacacctccgtcc
ctgtggggggtacagctgcaggtgcccagcgttgcagggatgaagcaggtgggtgggctt
catcaagcacgccagcttcttatggacaccatcctactgcctgccaagtacccgctgctc
ttctccagtctgccaattcgccatcgctctggggtgctgctctatggagcgcctggcaca
gggaaaaccctactggctggagctgttgccaaggagagtggcatgaacttcatcagcatt
aagggaccggagctgctcagcaagtacattggtgccagtgagcaggctgtgagggatgtg
tttcagagagcacaagcagctaagccctgtattcttttttttgatgagtttgactccctt
gcaccacgcagaggacacgacagcacaggggtcactgaccgagtggtaaaccaactgctc
acacagctggatggagtagaggggctgcagggcgtgtacgtgttggcagccaccagtcgc
ccggacctgatcgacccagcgctgctgaggcctggacggctggacaagaccctgtactgc
cctcctccagaccgggaagccagactggagatcctaaaggcgctgactcacaatgtgcca
ctggctgcagatgtggacttggagcagatcgctgtagccactgagctgtacacaggagct
gacctgaaaggcctgttatacaatgctcagctggaggccattcacagcagtctgggacct
agcatgttggctgagttgggctcaggatcagacagtgaagtaagcgtatcatcgctgatc
ttcctgaaccaaagcagtggctctgatgactctgcaggagagactgaggctggtatagag
acttctgcaatggcactagagcacagtgagattcccactgaagacttaaaccacaatata
tggcgcctctactttggcagctcatttgaattggagctcggtcaccattcaccttctgag
ctgaattcccagtgcatgtctgtccccaactccaccacacacgagctgaccggtgcatca
gtgagagacctgactttcctccggggcccagtgctcatgtcctctgtgcagcaaggcttc
caggagctgaactctgagcaatctgagcgtctccgagctgatctcaacaccatcaaaagc
agctatcacaggagcccagaggactccagtttgggacagacaggacctgttaaacctgca
gtcctgatatgtcagtctcacctcatgtcagcactggctaacactagagcctctatcagt
agacaggactggaggaggtatactgatctctatgagtcatttggggctttgagagaaggc
aagtctcagaacgctgtgttgtttacaccaggtcagcgagtgacgctggcttaa
DBGET
integrated database retrieval system
