Tachysurus fulvidraco (yellow catfish): 113661414
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Entry
113661414 CDS
T08119
Symbol
vps50
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113661414 (vps50)
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Others
EARP complex
113661414 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
113661414
NCBI-ProteinID:
XP_027031409
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All DBs
Position
24:complement(8838638..8959937)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESMADMSPVESFRVPSKEELRELREQPIDPQAEQEIIDSIDEV
YFSNDSIDMVQYELEKLPPDLNLQELEEYRDKLKKQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTTLQLAAVICTNARRQLAFAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKNFDVAHYTRVQLAYSLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKEEVKDADTD
GTSDEGSEEATVGHSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
ITQLHEFKFMGQCRSPSVSPSRQPASSYSEELSLFAQYDQGGNPFEMQIDNKEEESEDVL
ASNGYESEELEKNVYQDYDSDSDVADELKQDFVDEQTGDIPNKSVSRETLRSRKRSDYSL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
YESSGLGLISSRLRTTLNRIQESLIDMEAGGENAATHGSSEDRKEKVPSPHLSQLVVLTA
SSTLYGLAERVVATESLVFLAEQFELLQPHLDTMMPPAKKPFLQQFYSQTVSTASELRKP
TYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNVYVDVLLKEFEEFNKRLGDVSKQVQI
PLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPD
KEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaaatctttaatgtcccgacagggtttgaaaagccctcaggagagtatg
gcagatatgagtcctgtggagagcttcagggtcccgagcaaggaggagctgagggagctg
agggagcagcctattgatcctcaagctgagcaggagatcatcgacagcatagatgaggtg
tacttctccaacgactccattgacatggtgcagtacgagctggagaaacttcccccggat
ctgaacctgcaggagctggaagagtacagagataaactgaagaaacagcaagcagcagtt
tcaaaaaaagttgctgaccttatcctagaaaaacagccatcgtatgttaaggaattggag
cgagtaacatccctgcaaaccacactgcagttggctgcagttatctgcaccaatgcccgg
aggcagcttgcttttgctaaagaaggcttcaccgaagcaagtcttgggctcctggccaac
cagagacgcaggcagctgctgacaggattgttaaagtctttaagaaccattaagacactg
caaaggactgatgttcgactgagtgagatgctggaggaggaggactatccgggtgcaatc
cagttgtgcttggaatgtcaaaaggctgccagcactttcaagcactacagctgcataagt
gagttgaattcaaagctgcaagacactctggaacaaatcgaggagcagctggatgtagcg
ctgtcgaaaacatgcaagaactttgacgtcgctcactacaccagagttcagcttgcgtac
tcgctattgggcaagacacagacggctatggaccagcttcacatgcactttacccaggcc
attcacaacactgtgttccaggtggtgctgggatatgtggagctgtgtgctggcaacgca
gacaccaaattccagaagatgcagtataaggatctgtgcacgcacatcaccccggacagc
tacatcccctgcctgactgacctgtgcaaagcactgtgggaagtgatgctcagttactac
cgaaccatgcagtggcatgaggagcatgacaaagaggaggtgaaggatgctgacacagat
ggtaccagtgatgaaggctcagaggaagctacagtgggccacagctatgtgaagaaaaag
cttgaacatggcctaagtcgcatttggcaggacgtccagctgaaagtgaaagcctattta
ttggggacagacatgtccaacttcaagtatgatgactttattgtggtgctggatgttatt
agcaggctgatgcaggtgggagaggagttctgtggcagcaagtctgagttgctacaggag
tcaataaagagacagagcgtgaactactttaagaactatcacagaacacgcctggaggag
ttgcgcatgtttctggagaatgaaacatgggagttgtgtcctgtgaagtccaactttagt
atcactcagcttcatgagtttaagttcatgggtcagtgtcgttcgccgtcagtgtctccg
agcaggcagccagcctccagttactctgaggagctgtctctctttgcccagtatgatcag
ggtggaaacccttttgagatgcagattgacaataaggaagaggagagtgaagatgtcctg
gcttccaatgggtacgagtctgaagagctggagaagaatgtgtatcaggactatgacagt
gacagtgatgtggcagacgaactgaagcaggactttgttgatgagcagactggagacatt
cccaacaagagcgtgtccagagagactctccgcagcagaaaaagatctgactacagtctg
aacaaagtcaacgcccccatcctgaccaacaccactcttaacgtgatccgtctggtcggt
aaatacatgcagatgatgaacattttaaaacccattgcatttgacgtcatccactgcgtg
tcacagctgttcgattattacctgtacgccgtgtacaccttcttcggccggaacgacatg
tatgaatcatccggactggggctgattagcagtagactgaggacgacactcaaccgcatc
caggagagtctcatagacatggaggcaggaggagagaacgcagccacccatggatcctct
gaggaccgaaaggagaaggtgccgagccctcacctgagccagctggtggttctgacggcc
agtagcacgctgtatggactggcggagcgtgtagtcgccacagagtcacttgtgttcctg
gcagagcagtttgagctcctccagcctcatcttgacaccatgatgcctccagccaagaaa
cctttcctgcagcagttctactcccagacggtgtccacagccagtgagcttcgcaagccc
acttactggatagtggcagctaaagccattgattatgagcagatgctgctgctgatggca
ggagtgaaatgggacattaaagagataatgtcacagcacaacgtctatgtggatgtgctt
ttaaaggaatttgaggagttcaataaaaggcttggtgatgtttccaaacaagtgcagatc
cccctccctgtttcaaatgtcctctgggagcactgcatccgtctggctaaccgaacacta
gtggagggctatgctaatgtgaaaaaatgcagtaacgagggccgagcactgatgcagcta
gacttccagcagttcctcatgaagctggagaagctcaccgacctcagacctatcccagat
aaggagtttgtcgagacctacattaaagcctattacttgactgagaatgacatggagcag
tttattaagaaccacagggaatactccatgaagcagctggccaacctggtcaacgtctgc
ctcggctcccacatcaacaaaaaggccaggcagaaactcctggcagctattgatgacatt
gaccgtccaaaaagataa
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