Tachysurus fulvidraco (yellow catfish): 113661469
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Entry
113661469 CDS
T08119
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113661469 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113661469 (snrpd1)
03032 DNA replication proteins [BR:
tfd03032
]
113661469 (snrpd1)
Spliceosome [BR:
tfd03041
]
Complex A
U1 snRNP components
Sm proteins
113661469 (snrpd1)
U2 snRNP components
113661469 (snrpd1)
Complex B
U1 snRNP components
113661469 (snrpd1)
U4/U6.U5 tri-snRNP components
113661469 (snrpd1)
Complex C
U2 snRNP components
113661469 (snrpd1)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113661469 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
113661469
NCBI-ProteinID:
XP_027031496
LinkDB
All DBs
Position
24:complement(6499217..6502982)
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKIKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtccggtttttgatgaaattgagccatgaaacggttaccattgagctgaag
aatggcacccaagtccacggcaccatcacaggtgtggatgtgagcatgaacactcacctg
aaagcggtgaagatgaccctaaagaacagagagcccacacagctggagtcactgagcatc
cgcggcaacaacatccgctacttcatcctgcccgacagccttcccctcgacaccctgctg
gtagacattgagcccaaaatcaagtcgaagaagagagaggcggtggccggccgtggacgt
ggaagaggacgtggcagaggaagaggacgaggacgtggaagaggcgggccgaggagatga
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