KEGG   Tachysurus fulvidraco (yellow catfish): 113661497
Entry
113661497         CDS       T08119                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113661497 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfd03019]
    113661497 (exosc5)
Messenger RNA biogenesis [BR:tfd03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     113661497 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 113661497
NCBI-ProteinID: XP_027031679
LinkDB
Position
13:complement(6132264..6135479)
AA seq 218 aa
MELDICSPVLREFGSEQSLLSKPDGSATFMQGDTSVLVGVYGPAEVKVNKEIYDRATLEV
LIQPKAGMPSVRERTREKCVRGTCEAALLSTLHPRSSLTLVLQVVHDDGSLLACCLNGAC
MALMDAGLPMSRLFCGVTCAIDAEGQIITDPTAQQEKESRALLTFAIDSKEHNVMMSSTK
GSFSMNEMQQCIAVSQKASERIFQFYRDSVKRRYSKIL
NT seq 657 nt   +upstreamnt  +downstreamnt
atggagctggacatctgtagtccagttttaagggagtttggcagcgaacagagtttatta
tccaaacctgacggttcagccacgtttatgcaaggagacaccagtgtgttagtaggtgtg
tatggacctgctgaggttaaagtcaacaaggagatctatgatcgagcaactctggaggtt
ctgatccagcccaaagccggcatgccgagtgtccgggagcgcacgagagagaagtgtgtg
cgggggacgtgtgaagctgctctgctgtccacgcttcatcctcgttcttccctgacgctt
gtcctgcaggtggtgcacgatgatggatcgttgttagcttgctgtctgaacggtgcctgc
atggcgctgatggacgccgggctacccatgagccgcctgttctgcggagtcacgtgtgcc
atcgatgccgagggacaaatcatcacagaccccacggctcagcaggaaaaggaaagtcga
gccctgttgacttttgccatcgatagcaaagagcacaatgtcatgatgtcatcaaccaaa
ggttctttctcaatgaacgagatgcagcagtgtatagcggtgagccagaaggcgtctgag
cggatcttccagttttatagggattccgtgaagcgacgatactccaaaatattatga

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