Tachysurus fulvidraco (yellow catfish): 113661497
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Entry
113661497 CDS
T08119
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113661497 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113661497 (exosc5)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113661497 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113661497
NCBI-ProteinID:
XP_027031679
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All DBs
Position
13:complement(6132264..6135479)
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AA seq
218 aa
AA seq
DB search
MELDICSPVLREFGSEQSLLSKPDGSATFMQGDTSVLVGVYGPAEVKVNKEIYDRATLEV
LIQPKAGMPSVRERTREKCVRGTCEAALLSTLHPRSSLTLVLQVVHDDGSLLACCLNGAC
MALMDAGLPMSRLFCGVTCAIDAEGQIITDPTAQQEKESRALLTFAIDSKEHNVMMSSTK
GSFSMNEMQQCIAVSQKASERIFQFYRDSVKRRYSKIL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggagctggacatctgtagtccagttttaagggagtttggcagcgaacagagtttatta
tccaaacctgacggttcagccacgtttatgcaaggagacaccagtgtgttagtaggtgtg
tatggacctgctgaggttaaagtcaacaaggagatctatgatcgagcaactctggaggtt
ctgatccagcccaaagccggcatgccgagtgtccgggagcgcacgagagagaagtgtgtg
cgggggacgtgtgaagctgctctgctgtccacgcttcatcctcgttcttccctgacgctt
gtcctgcaggtggtgcacgatgatggatcgttgttagcttgctgtctgaacggtgcctgc
atggcgctgatggacgccgggctacccatgagccgcctgttctgcggagtcacgtgtgcc
atcgatgccgagggacaaatcatcacagaccccacggctcagcaggaaaaggaaagtcga
gccctgttgacttttgccatcgatagcaaagagcacaatgtcatgatgtcatcaaccaaa
ggttctttctcaatgaacgagatgcagcagtgtatagcggtgagccagaaggcgtctgag
cggatcttccagttttatagggattccgtgaagcgacgatactccaaaatattatga
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