Tachysurus fulvidraco (yellow catfish): 113661499
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Entry
113661499 CDS
T08119
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
tfd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113661499 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113661499 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113661499 (nup153)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113661499 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
113661499
NCBI-ProteinID:
XP_027031559
LinkDB
All DBs
Position
24:complement(12986751..13003681)
Genome browser
AA seq
1454 aa
AA seq
DB search
MAATGGGKIRTRRYHIVSKPYGKAKQQPGLISRVTDTVKSIVPSWLQKYFNNGEVAEGGE
THVQVEQNNIPTPPNGNQEPAPLPDGCDSPEPSTSNAEPSTSRASLNFQDVLSRPPLNRS
HLHFPSQDGSPALGGSLFSQPSTSTAPFPASPFAVSSSFSLVKEIKDSSSQHEDDNISTT
SGFSSRASDKDVPTSKTAPLLWSPEMDRTHTGSQPAHAGLKRPAFNLSVFGTSSSSVMNS
SVLNSTQLGDSPFYPGKTTYGGASAAKTARSRPGTPYQAPVRRQIKAKPAGAQPCGVTSA
TARRILQSLERMSSPLADAKRIPSAVSSPLSSSLNRTDLDVHFQSKRKKLEPAVPPVQKL
VIPAAAAVSGNRSVSFRPSLTPGSVSRGVEKGSKETPVRRSPHIPDAIPAATPSTSSLSY
PLSSTPAICITGGGKMKRERSIRPSTKRPDDEVAEVPNLPAVSLPISNFKLPTFSFSSPP
PASTLTPSTRPMPLVSEQAANSKGTNAVSTSVSFTFSSPIVKATAGSPMSFSPSSEFTFS
APTMKTATSMSNGKLALAVSALKPTSEHSEEFDGPFKPAKTLKQGSVLDILKGPGFAPPA
QTSSETEPTKSTRSTSVHTPLTSLSGFGEKFKPAAGSWNCGTCLLQNKSSDKKCVACQAP
QPSTDSSSRSDSKPVKAPAASHSSLFAPPAGSWECDTCLVQNKPEVVKCVACETSRPGTG
VKPALTRPPVSEVSLTPTASSTPATSSTTTTTSGLSLADKFKKPEGAWDCDVCMVQNKAQ
DSKCVACQSAKPGVSAVPSFQAPSSLPPASTPASSAPLLGFGDQFKKPEGSWECDVCCVQ
NKAEDQQCVACQSTKPGAKVETKGIGPQTSSTNSTSSAFKFGSSNSSSAELKFGGTFSNS
TSAMSFKFGNAPSDSAATSVGFKFGGASSERTSTGASSTESFKFGGASDGFKFGAASTSE
STSEEKKSETQNSAPGFKFGGSGASVGSGFKFGAASTSESTSEEKKSESQNSTAGFKFGG
NPISTATTTASGGFAFGLSKPEDKTGSNLLFSLSVPKAKGEKEDPLPSPDAVSESNTAEL
FGEGTPQETSTTTFMFGKPEEKKDTSSGFLFTGAKEADKPAPSVGFSFSKPDPPKELPKP
SFAFGKPAEPTETTKPAFGFGQNATDNTAPKPTFAFMGSSAATPASNSLAPSLFGTPSSS
SQAPNPAPNSNFVFGQSSSSDAPSKSFMFGQQQQETQPASVEPSAGPNPVPTFVFGSVSN
SNASPFAFGGASSTPTSTAPAPSAAPAPFGFTATTSTSGFGSGQTPAFGSAQSTVPAFGS
AASSFTATASAAPAFGVKPSAPSVFGQQPNSTPAFGSSTASSGQGAFQFGGATAFGVTGS
NNSNVFTFGGGSGGTASPAASPAMPAQPAAPVGGFGFSQSPAFNIGSVKSSSPAPAGQHG
IAGRKIKTAVRRRK
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacaggaggagggaaaatcagaacgagacgatatcacatcgtgtctaaacct
tacggcaaggctaaacagcagcctggactgatcagtcgagtaacagacaccgtgaagagc
atagtcccctcttggctgcagaagtactttaataatggagaggtagctgaaggaggagag
acccatgtgcaagttgagcagaacaacatacctactcctcccaatggcaatcaggaacct
gctccgctccctgatggatgcgactccccagaacccagcaccagtaacgcagaaccctct
acaagcagagcgtctttgaacttccaggacgttctctccagacctccgctcaaccgctcc
cacctacatttcccttcccaagacggatccccagcacttgggggctctctcttctcccag
ccttccacatctacagctccctttcctgcaagcccctttgccgtaagctcaagcttctct
ctggtgaaggagatcaaggactctagctctcagcacgaggacgacaatatctccaccacg
agtggcttttcatcaagagcgtctgataaagatgtacccacgtcaaagactgcaccactc
ctctggtcccctgagatggatcgcacacataccggatcacagccggctcacgctggtctc
aagaggccagctttcaatctgtcagtctttggcacttcctcatcatctgtgatgaacagt
tcggtgctgaactccactcagctgggagattctcccttctatccagggaagactacttat
ggtggcgcttcagcagccaagactgctcgttcacgaccgggcacgccttatcaggctcct
gtgaggagacagatcaaggccaaaccggcaggagctcagccgtgtggagtgaccagcgcc
acagccagacgcatcctgcagtcactagagcgcatgtctagccctcttgctgatgcgaaa
agaattccatcagcagtttcctctcctttatcatcatcattgaatcgcacagatctagat
gttcatttccagtctaagaggaaaaagctggaaccggctgtcccgcctgtgcagaaactg
gtgatcccagctgccgcagctgtgtctgggaaccgctccgtgtctttccgcccttcgcta
actcctggatctgttagcagaggtgtggaaaagggcagcaaggagacgcctgttagacgg
tcccctcatatcccagatgcaattccagctgccacaccaagcacaagcagcctgtcgtac
ccgttgtccagtacacctgctatctgcatcacgggtggcggcaagatgaagcgagaaagg
agcatccgcccttccaccaaaagacctgatgacgaggttgctgaagtgccgaatctgcct
gctgtctctctgccgatcagtaacttcaagctgcctactttcagtttctcatccccaccc
cctgcatcgaccctcaccccgagcaccaggccaatgccactggtctctgagcaagcagcc
aacagcaaggggacaaatgctgtgtctacatccgtttcttttaccttttcttcacccatt
gtcaaggcaacagctggcagtccaatgtccttttctccatcatctgaatttaccttcagc
gcacctactatgaagactgcaacttccatgtcaaatgggaaacttgctctagcagtatct
gcattaaaaccaaccagcgaacatagcgaggagtttgatgggcctttcaaacctgctaag
actttaaagcagggtagtgttctggatatccttaaaggacccggttttgctcctccagcc
cagacctcctctgaaacagaacccacaaagtcgacacgcagcacatctgtacatacaccc
ttgacttctctctctgggttcggagagaagtttaaacctgcagcaggatcatggaactgt
ggcacctgcctgctgcaaaacaaatcctcagacaaaaagtgtgtggcctgccaggctcca
cagcccagcacagactcttcatccaggtcggacagtaaacctgtgaaagcccccgctgct
agtcatagttctttgtttgccccgccagctggaagctgggaatgtgacacgtgtctggtg
cagaacaagcctgaggtggttaaatgtgtagcgtgcgaaacatccaggccaggaactgga
gtaaagcctgcactgactcggcctcctgtctctgaggtctccttaacacctactgcttct
tctaccccagccaccagttccacaaccaccaccacatctggactaagtttggctgacaag
tttaagaagccagagggggcatgggattgcgacgtatgcatggttcaaaataaagcacag
gattctaagtgtgtagcgtgtcagagcgctaaaccaggagtatcagcagtaccgtcattc
caagcaccttcatccctgcctcctgcatctacaccagcaagtagtgctcctcttttggga
tttggtgaccagttcaagaaacctgagggcagttgggagtgtgacgtctgctgtgttcaa
aacaaggctgaggaccagcagtgtgtggcctgccaatcaaccaaaccgggagctaaagta
gaaaccaaaggtattggccctcagacatccagcactaattcaacctcaagtgcattcaaa
tttggttcctcaaattcaagctctgctgaattgaaatttggtggcactttttcaaactcc
acctccgcaatgtcctttaaatttggcaatgctccttcagactctgctgcaacttctgta
ggcttcaaattcggaggcgcttcctcagaacgcacctcaacaggtgccagttcaactgag
agtttcaagtttggtggcgcatcagatggctttaaatttggagcagcctctacttctgaa
tcgacgagtgaagagaaaaagagcgagactcaaaattctgcgcctggttttaagtttgga
ggaagcggtgcaagtgtcggctctggctttaaatttggagcagcctccacttcggaatca
acaagtgaagagaaaaagagcgagtctcaaaattctactgctggttttaaatttggagga
aaccctataagcactgctactacaactgcatcagggggctttgcatttgggctttcaaaa
cctgaagacaaaacggggtccaatctgttgttcagtttgtcagtgcctaaagccaaaggt
gaaaaggaagaccctcttccatccccagatgctgtttctgagtctaacacagctgaattg
tttggagagggaaccccacaggagacttcgaccactactttcatgtttggtaaaccagag
gagaaaaaggatacctcaagtggctttctgttcactggagccaaggaggctgacaaacct
gcaccctctgtgggcttcagtttcagcaagccagaccctccaaaggagctccccaaacct
tcatttgcatttggaaaacctgctgagcccacagaaaccacaaagccagcatttggcttt
ggacagaatgccacagacaatacagcaccaaagcctacgtttgcttttatgggtagttca
gccgccacccctgcctccaatagtcttgcacccagcctctttgggactcccagcagttcg
agccaagcccccaaccctgctccaaacagcaactttgtttttggccagagttcctcttca
gatgcaccttccaagagctttatgttcgggcagcagcagcaagaaacccagccagcttca
gtagaaccctctgctggtcctaatccagtaccaactttcgtctttggctctgtgagcaat
tcaaacgcatcaccattcgccttcggcggtgcatcttctacacccacgtctacagctcct
gcaccttctgcagctccagctccatttgggtttactgccaccacttccacctctggcttt
ggctctggacagaccccagcatttggctctgcacagtccactgttccagcttttggctca
gctgcatcctctttcacagccacagcatcagcagctcctgcctttggagttaagcctagc
gctccttccgtgttcggccagcagcccaactcaacacctgcttttgggtcatctactgcc
tcttctggacaaggagccttccagtttgggggagccacagcttttggggtaactggtagc
aacaacagcaatgtgtttacatttggaggagggtctggaggtacagccagtcctgcagca
tctccagccatgcctgcacagccagcagcacctgtaggaggctttggcttctcacagtcc
ccggccttcaatatcgggtcagtaaagagttccagcccggcaccggctggacagcatggc
atcgccggccgaaagatcaaaactgctgtccggcgtaggaagtaa
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integrated database retrieval system
