Tachysurus fulvidraco (yellow catfish): 113661593
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Entry
113661593 CDS
T08119
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03082
ATP-dependent chromatin remodeling
tfd03083
Polycomb repressive complex
tfd04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113661593 (rbbp4)
03083 Polycomb repressive complex
113661593 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
113661593 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113661593 (rbbp4)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
113661593 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
113661593 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
113661593 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
113661593 (rbbp4)
PRC2.2
113661593 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
113661593 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
113661593 (rbbp4)
Chromatin remodeling factors
NuRD complex
113661593 (rbbp4)
NuRF complex
113661593 (rbbp4)
NuRF complex (fruit fly)
113661593 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
113661593
NCBI-ProteinID:
XP_027031742
LinkDB
All DBs
Position
24:complement(10977550..10983065)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDTQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagaagctgcttttgatgatgcggttgaggagcgggtgatcaatgaggag
tacaagatatggaagaaaaacacgccgttcctctacgacctggtgatgacccacgcactc
gagtggccgagtctcaccgcgcagtggctccctgatgtcaccaggcctgaggggaaagac
tacagtgtccatcggctggttctcggcacccacacctctgatgagcaaaaccacctggtc
attgccagtgttcagctgccaaatgatgatacccagtttgatgcctcacattacgacagt
gaaaaaggagagtttggtggctttggatcagtgagtggcaagattgagattgagatcaag
attaaccatgaaggagaagtgaaccgtgcccgctacatgcctcaaaacccctgcatcatt
gccaccaagactccaaccagtgatgtgctggtctttgattacaccaaacacccatccaaa
ccagacccctctggagaatgcactcctgacctgcgattgagaggacatcagaaagagggc
tatggtctgtcttggaaccccaacttaagtggctgcctcctcagtgcctctgatgatcat
acgatctgtctgtgggacatcagcacagtacccaaggaagggaaaatagttgatgctaag
accattttcactggtcacactgctgtggtggaggatgtgtcctggcaccttctgcatgaa
tctctctttggatcagtagcagatgaccagaaactgatgatttgggatacacgctctaac
aacacatccaagcccagtcatgcagtagatgcacacactgcagaggtcaattgcctctca
ttcaatccttacagtgagttcatcctggctactggatctgctgacaagactgttgccttg
tgggatctcaggaaccttaagttgaagctgcattcctttgagtcacacaaagatgaaata
ttccaggttcagtggtcacctcataatgagaccatcctggcctctagtggaacagacaga
cgtctcaatgtttgggatctcagtaaaattggtgaggagcagtcaccagaagatgcagaa
gacggacctcctgaattactgttcatccatggtgggcacacagcaaagatctcagacttc
tcctggaaccccaatgagccctgggtgatctgctctgtgtctgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaatgatgaggaccctgaaggagcagcagacaca
gaggtccagggataa
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