KEGG   Tachysurus fulvidraco (yellow catfish): 113661593
Entry
113661593         CDS       T08119                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03082  ATP-dependent chromatin remodeling
tfd03083  Polycomb repressive complex
tfd04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113661593 (rbbp4)
   03083 Polycomb repressive complex
    113661593 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    113661593 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tfd03036]
    113661593 (rbbp4)
Chromosome and associated proteins [BR:tfd03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     113661593 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     113661593 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     113661593 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     113661593 (rbbp4)
    PRC2.2
     113661593 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     113661593 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    113661593 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    113661593 (rbbp4)
   NuRF complex
    113661593 (rbbp4)
   NuRF complex (fruit fly)
    113661593 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 113661593
NCBI-ProteinID: XP_027031742
LinkDB
Position
24:complement(10977550..10983065)
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDTQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcagataaagaagctgcttttgatgatgcggttgaggagcgggtgatcaatgaggag
tacaagatatggaagaaaaacacgccgttcctctacgacctggtgatgacccacgcactc
gagtggccgagtctcaccgcgcagtggctccctgatgtcaccaggcctgaggggaaagac
tacagtgtccatcggctggttctcggcacccacacctctgatgagcaaaaccacctggtc
attgccagtgttcagctgccaaatgatgatacccagtttgatgcctcacattacgacagt
gaaaaaggagagtttggtggctttggatcagtgagtggcaagattgagattgagatcaag
attaaccatgaaggagaagtgaaccgtgcccgctacatgcctcaaaacccctgcatcatt
gccaccaagactccaaccagtgatgtgctggtctttgattacaccaaacacccatccaaa
ccagacccctctggagaatgcactcctgacctgcgattgagaggacatcagaaagagggc
tatggtctgtcttggaaccccaacttaagtggctgcctcctcagtgcctctgatgatcat
acgatctgtctgtgggacatcagcacagtacccaaggaagggaaaatagttgatgctaag
accattttcactggtcacactgctgtggtggaggatgtgtcctggcaccttctgcatgaa
tctctctttggatcagtagcagatgaccagaaactgatgatttgggatacacgctctaac
aacacatccaagcccagtcatgcagtagatgcacacactgcagaggtcaattgcctctca
ttcaatccttacagtgagttcatcctggctactggatctgctgacaagactgttgccttg
tgggatctcaggaaccttaagttgaagctgcattcctttgagtcacacaaagatgaaata
ttccaggttcagtggtcacctcataatgagaccatcctggcctctagtggaacagacaga
cgtctcaatgtttgggatctcagtaaaattggtgaggagcagtcaccagaagatgcagaa
gacggacctcctgaattactgttcatccatggtgggcacacagcaaagatctcagacttc
tcctggaaccccaatgagccctgggtgatctgctctgtgtctgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaatgatgaggaccctgaaggagcagcagacaca
gaggtccagggataa

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