KEGG   Tachysurus fulvidraco (yellow catfish): 113661612
Entry
113661612         CDS       T08119                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514  Cell adhesion molecules
tfd04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113661612 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113661612 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tfd00535]
    113661612 (sdc3)
Proteoglycans [BR:tfd00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   113661612 (sdc3)
SSDB
Motif
Pfam: Syndecan TGF_beta_GS DUF1275
Other DBs
NCBI-GeneID: 113661612
NCBI-ProteinID: XP_047664126
LinkDB
Position
24:11781579..11808855
AA seq 452 aa
MKLPGWMAVALLFAHSVSTQRHSLRPVDQEGSGNDLYDDEDYFSGSGSGYPVMEIDSTEP
SASTPTKESLPVSTTQASGPAPSAPPAAEPSSTPAPEVDRESGMDNERELEMEMEKKREQ
QTEHEQEMERVREREREWEREREREREREREKERERERERERERERDRERERERERERER
EHEREKERERARSTTAPIVPKMTTDTLMILNKTPSPNEDIVTTEEEDGLFISTETSPFES
FSSEDLFTDDIVTTEVAPITIASTTARPITTPATPSTTPPRSRKPHPVPSISPKRPRKPQ
ATASPATPTESTRPVPTSTVQVKTPETDINNEVAVAGPSGDSEIREEDGRRGNELGHGKG
ASDVGAEPDLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYR
MKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgaagctgccgggctggatggctgtggcgctgctgttcgcgcactccgtatcgacacag
cgtcactcattgcggccagtggatcaggagggctctggaaatgacctctatgatgatgag
gactatttctctggttcaggctcaggctatcctgtgatggagatagactcgactgaaccg
agtgcatctacccctacaaaagagtccctcccagtttcaaccacacaggcctctggaccc
gccccttcagccccacccgctgcagagcctagcagcaccccggcaccagaagtagacagg
gagagtggcatggataatgagagggaactggagatggagatggagaaaaagagagagcag
cagactgagcatgagcaggagatggagagggtgcgggaaagggaaagagagtgggagagg
gaaagagagcgagagagggagagagagcgagagaaggagagagagcgagaaagggagaga
gaaagggagagagaacgggatagagagagggagagagaaagagagagggagagagaacgt
gaacatgaacgtgaaaaagaaagagagagggcaagaagtacaactgcccccattgttcca
aaaatgaccacagacactctaatgattttaaacaagacccccagtcccaatgaggatata
gtcaccactgaagaagaggatggtttgtttatttctacagaaacctcccccttcgaatca
ttcagctcagaggacctcttcacagatgacatcgtaaccactgaggtggctcctatcact
attgcttccactacagctaggccaatcacgactcctgccacacccagcaccacccctcct
cgatcacgaaaacctcatcctgttcccagtatctctcctaaacgtccacggaaaccccaa
gctacagccagcccagccacacccactgaaagtacacgcccagtgccaacttctacagta
caggtaaaaacaccagaaacagacattaataatgaagttgcagttgctggtcccagtggg
gactctgagatccgagaggaggatggacgacgaggaaatgaattagggcacggcaaaggt
gcatcggacgttggtgcagagcctgatttaactggcaacacaatagatacaggaagttca
gctgctcagcttcctcagaaaaacatcttggaaagaaaagaagttttgatagctgtgatt
gttggcggtgtagttggcgcactgtttgctgcattcctggtcatgttacttgtatatcga
atgaaaaagaaggatgaaggcagctacactctggaggaacccaaacaagccacagttact
tatcagaaaccagacaagcaggaggaattctatgcctaa

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