Tachysurus fulvidraco (yellow catfish): 113661612
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Entry
113661612 CDS
T08119
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecules
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113661612 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113661612 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfd00535
]
113661612 (sdc3)
Proteoglycans [BR:
tfd00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
113661612 (sdc3)
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
TGF_beta_GS
DUF1275
Motif
Other DBs
NCBI-GeneID:
113661612
NCBI-ProteinID:
XP_047664126
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Position
24:11781579..11808855
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AA seq
452 aa
AA seq
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MKLPGWMAVALLFAHSVSTQRHSLRPVDQEGSGNDLYDDEDYFSGSGSGYPVMEIDSTEP
SASTPTKESLPVSTTQASGPAPSAPPAAEPSSTPAPEVDRESGMDNERELEMEMEKKREQ
QTEHEQEMERVREREREWEREREREREREREKERERERERERERERDRERERERERERER
EHEREKERERARSTTAPIVPKMTTDTLMILNKTPSPNEDIVTTEEEDGLFISTETSPFES
FSSEDLFTDDIVTTEVAPITIASTTARPITTPATPSTTPPRSRKPHPVPSISPKRPRKPQ
ATASPATPTESTRPVPTSTVQVKTPETDINNEVAVAGPSGDSEIREEDGRRGNELGHGKG
ASDVGAEPDLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYR
MKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgggctggatggctgtggcgctgctgttcgcgcactccgtatcgacacag
cgtcactcattgcggccagtggatcaggagggctctggaaatgacctctatgatgatgag
gactatttctctggttcaggctcaggctatcctgtgatggagatagactcgactgaaccg
agtgcatctacccctacaaaagagtccctcccagtttcaaccacacaggcctctggaccc
gccccttcagccccacccgctgcagagcctagcagcaccccggcaccagaagtagacagg
gagagtggcatggataatgagagggaactggagatggagatggagaaaaagagagagcag
cagactgagcatgagcaggagatggagagggtgcgggaaagggaaagagagtgggagagg
gaaagagagcgagagagggagagagagcgagagaaggagagagagcgagaaagggagaga
gaaagggagagagaacgggatagagagagggagagagaaagagagagggagagagaacgt
gaacatgaacgtgaaaaagaaagagagagggcaagaagtacaactgcccccattgttcca
aaaatgaccacagacactctaatgattttaaacaagacccccagtcccaatgaggatata
gtcaccactgaagaagaggatggtttgtttatttctacagaaacctcccccttcgaatca
ttcagctcagaggacctcttcacagatgacatcgtaaccactgaggtggctcctatcact
attgcttccactacagctaggccaatcacgactcctgccacacccagcaccacccctcct
cgatcacgaaaacctcatcctgttcccagtatctctcctaaacgtccacggaaaccccaa
gctacagccagcccagccacacccactgaaagtacacgcccagtgccaacttctacagta
caggtaaaaacaccagaaacagacattaataatgaagttgcagttgctggtcccagtggg
gactctgagatccgagaggaggatggacgacgaggaaatgaattagggcacggcaaaggt
gcatcggacgttggtgcagagcctgatttaactggcaacacaatagatacaggaagttca
gctgctcagcttcctcagaaaaacatcttggaaagaaaagaagttttgatagctgtgatt
gttggcggtgtagttggcgcactgtttgctgcattcctggtcatgttacttgtatatcga
atgaaaaagaaggatgaaggcagctacactctggaggaacccaaacaagccacagttact
tatcagaaaccagacaagcaggaggaattctatgcctaa
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