Tachysurus fulvidraco (yellow catfish): 113661687
Help
Entry
113661687 CDS
T08119
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113661687 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113661687 (hbs1l)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113661687 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
113661687
NCBI-ProteinID:
XP_047663325
LinkDB
All DBs
Position
23:complement(17968117..18003631)
Genome browser
AA seq
611 aa
AA seq
DB search
MRNNVAPHERTSPYQTYHYNYLKVWLTLCVLCVCVCVCVCVCVCVCAHAHAGEGIISTPT
PLPGLVAVPAVSGVCLCLEDKAKPRELPETRLESEVVPKVARMTVSGKKQTMGFDVPSSE
ENGVGPSVRRGVSPETTAGAAPETPSKAACVEAEDSAAPTPPRSTSKNKQQLNIRNELEQ
RQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQEAKKAGKASFAYAWVL
DETGEERDRGVTMDVGMTKFETKSKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASR
GEFEAGFEAGGQTREHALLVRSLGVTQLAIAVNKMDQVNWQQSRFQEITSKLGQFLKQAG
FKESDVYYVPTSGLSGENLTTRSTEAELISWYKGPCLLEQIDSFKAPQRSVEKPFRLCVS
DVFKDQGSGFCVTGKIEAGFIQTGERVLVMPPNETCTVKGISLHDEPLDWAAAGDHVSLT
VTGMDIIKINVGCVFCDPKEPIRSCTRFRARILLFNIEVPITQGFPVLLHYQTVIEPATI
RKLVSVLHKTSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKDYKELGRFMLRYVGST
IAAGVITEIKE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacaacgtcgctcctcacgagagaacctcgccatatcagacctaccactataac
tatctcaaggtgtggctgactttgtgtgttttgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgcgcacgcacatgcaggtgaaggaattatctctacccccaca
ccacttcctggccttgtggctgtgcctgcagtgtcaggtgtttgtctgtgtttggaagat
aaagccaaacctcgtgagcttcctgagactcgtttggaatctgaggtggttcctaaagtg
gccaggatgaccgtctcgggaaagaagcagaccatgggcttcgatgtgccgagctcggag
gagaacggagtcggcccgtccgtccgcagaggcgtgagtccagagacgacggcgggagca
gctccggagactccttctaaagcggcgtgtgtggaggcggaggactctgcggccccgact
ccgcctcgctccaccagcaaaaacaaacagcagcttaacattcgcaacgagctggagcag
aggcagggagggaaaccgctcctcaacctcgtcgtcataggtcacgtggatgccggtaag
agcacgctcatgggtcatctcctgtacctgctggggaacgtgaacaaacgcaccatgcac
aagtacgagcaggaggccaagaaagccggcaaggcctctttcgcttacgcctgggtgctg
gacgagaccggagaggagcgagacagaggggtgaccatggatgtgggcatgaccaagttt
gagaccaagtccaaagttgtgaccctgatggacgcaccaggacacaaagactttattcct
aatatgatcaccggagcagctcaggcggatgtagccgtgttggtggtggatgctagtcgg
ggagagtttgaggccgggttcgaggccggtggtcagaccagggagcatgcgctcctcgtt
cgctctctcggcgtcacacagctcgcaatcgctgtgaacaagatggaccaggtgaactgg
cagcagtcaaggttccaagaaataacttccaaactcggccagtttctcaagcaggctggt
ttcaaggaatctgatgtctattacgtccccaccagtggtctgtcaggagagaatctcacc
accaggagcacagaagcagagctcatctcctggtacaaaggcccatgtctactggaacag
atagactcttttaaagctcctcagaggtcagtggagaagcccttcagactctgcgtgtcg
gacgtctttaaagatcaggggtctggtttctgtgtgacggggaaaatcgaagctggcttc
attcagacaggagagcgagtgctggtcatgccacctaacgagacctgcactgtgaaaggt
atctctcttcacgacgagccgctagactgggcggccgccggcgatcacgtcagtctgacg
gtcacaggcatggacatcattaagatcaatgtcggctgtgtgttctgtgaccccaaggag
cccatcaggtcctgcactcgtttccgagcaagaatcctgctgtttaacattgaagtgcca
ataacacaaggctttcctgtcctgctgcactaccagacagtgattgagcctgccaccatc
agaaagctggtcagtgtgttacacaaaaccagtggtgaagtcctgaaaaagaaaccaaaa
tgtttgagtaaaggccagaacgctgtggtggagattcagactcagagacctgtggctctg
gagctctataaggactataaagaactcggacggttcatgctgcgttatgtgggttccacc
atcgctgctggggtcattacagagatcaaagaataa
DBGET
integrated database retrieval system
