Tachysurus fulvidraco (yellow catfish): 113661802
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Entry
113661802 CDS
T08119
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113661802 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113661802 (depdc5)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
113661802 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
113661802
NCBI-ProteinID:
XP_047660432
LinkDB
All DBs
Position
20:18627668..18669669
Genome browser
AA seq
1595 aa
AA seq
DB search
MSSGDKMTVTTKTKTYKLVVHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPL
LLQVKSLKEDLQKETISVDQTVAQAFKLRAYQDVVINIVDPKDVTLDLVELTFKDQYIGR
GDMWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSSSAMV
YIFIQMSCEMWDFDIYGDLYFEKAVNSFLSDLFTKWKEKNCSHEVTVVLFSRTFYAAKTQ
DEFPESLRGAIRQDHEGRYYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKGAD
GFPCGQNSTAVQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMI
LTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLDDYNLPHWINHSFYTSKS
QGLCSSFTPRIKLAGQKPHVEKLKSSKEHSLGAPRDSESSLPIQVDYDAHDAQVFRLPGP
ARAQRGTNFRSSREKEASIRKSWCSAEVGGGHYGGCSPPSRPVGGSEEQRSLASDDSLGR
ISNILLIPRQPPQYEVSSSLGYTSCARGMELLEKLVESQRDSSAPGRFTVGSAESTLHIR
PGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSE
QRDPTHTSAELLELAYHEAMGRRTGLPQTADSVGTDDYSGSPASSISTGTPVNRGSIDEC
SSISDPILQLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPERQSLQNDYTEGCYDL
LPHTDLERRDDEAPVISAPRVFEEFICQRLMQGFQIIVQPNSRKAPPTVAPPLSSSPLYS
RGLVSRRKAEEEESQYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESIQIQYGYSLCPPH
ADGHFVPCWVEFSHERVEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARR
VADGEGHWDVYGEGPGAAAGSGDWTLLDGFIRFLEGLNRIRRRHRSDRIIRKGGAIKGLQ
VTSPLSPYNAEPLAPPMGKKGVSALTTLLELDQTHKTLEEQQAASQCAVVVKANTSFSDA
TAVITMATTYVDSPRKDAAFMLDFIRSPRSSYLSHSQMPTELPASNPADSGSAEKGGNLP
NDRMVVGGATDPASGPEPGAQQDSLSSSSTMLEILEAIKHPNTGVQLLPEQKGLPPNCFI
SAEVVQWLMNTVENVATQGIAVEIMQKMLDDGLIVHASGEAMRTFVYGFYFYRIVDKDNE
KAPCSSSSSAAALDDLALFQRKWFEVALAMEETRPCDLPTFLLPWLPSRPASYASRHSSF
SRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSPNTAFEIKLHW
MAVTAAVLFEMVQGWHRKAASCGFLLVPSLEVPFALPSYLYGDPLRAQLFIPLNIQCLLK
DASENLFDGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFSFPAENKPQYIHVTGTVF
MQLPYSKRKYPSGQQRRRRNSASSASQSLFGPEEHVGYHWAYNTMLTKAWRTGVLGDEKL
AERLLRDFTDFCSNKDNRLMSFWENCVEKMNSSAP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgagttctggagataaaatgacggtcaccaccaaaaccaaaacctataagctggtcgtc
cataagaagggctttggaggaagcgatgatgagctgatgatgaacccaaaagtgtttcct
caggttaaactgggggacattgtcgagatcgcacaccccaatgatgaatacagcccgctc
ctgctccaggtgaaaagcctgaaagaagacctacagaaagagacgatcagcgtggaccag
accgtcgctcaggccttcaagcttcgcgcgtatcaggatgtcgttattaacatcgtggat
cccaaggacgtgaccctggatctagtagagctcaccttcaaagatcagtacatcggccga
ggggacatgtggagactgaagaagagtctggtgagcacgtgtgcatatgttacccagaaa
gtggagtttgcagggatcagggctcaggcgagtgagctgtgggtaaaaggcgagaaggtc
acctgtgggtacatcagcgaggacactcgggtggtgtttcgctccagctcagccatggtg
tacatcttcatccagatgagctgtgagatgtgggacttcgacatctacggtgacctttat
tttgaaaaggcagtgaacagtttcctctctgacctgttcaccaagtggaaagaaaaaaac
tgcagccatgaggtgacagtggtgttgttctctcgcactttctacgctgccaagacgcaa
gatgagtttcctgagagcctgagaggagccatcaggcaggaccacgagggacgctactat
gaggatttctacagagtggtggctcagaacgagaggagggacgagtggacgtctctgctg
gtcaccatcaagaagctctttatccagtatcccgtgctggttcggctcaaaggagcagat
gggtttccttgtggacaaaactccaccgctgttcaggggaattacctggaagccatcaac
ttgtcttttaacgttttcgataaacattacatcaaccggaacttcgaccgtacgggtcag
atgtcggtggtgatcacgccgggggtgggagtgttcgaggtcgaccggctgctcatgatc
ctcactaaacagcgcatgatagacaacggtatcggagtggacctggtgtgtatgggagag
cagccgcttcacgccgtcccactctttaagctacacaacagaacggtaccaggtgactcc
agactggatgactacaatctgcctcactggatcaatcacagcttctacacgtccaagagt
caaggcttgtgcagctcgttcactcccagaattaaactcgcaggtcagaagccccatgtg
gagaagttaaagagcagcaaagagcactctcttggagcccctagggactctgagagcagt
cttcccatccaggtggactacgatgctcacgatgctcaggtcttcagacttcctggacct
gcgagagcacagaggggaactaatttccggtcaagcagagagaaagaggcgagcattaga
aagagctggtgctcggcggaggtgggtggaggacattacggtggctgctctcctccttcc
cgtcctgtaggaggctccgaggagcagcgcagccttgcatccgacgacagtctgggccgc
atctcaaacatcctgctgatacctcgccagccgcctcagtacgaagtcagcagctccctc
ggctacaccagctgtgccagaggtatggagctgctagagaagcttgtggagtcacagcgg
gactcgagcgctccaggacgcttcactgtgggcagcgctgagtcgacgctgcacatccgc
ccgggcggttacacgccacaaagagctctcatcaatccatttgctccatcacgcatgccc
atgaagctcacctccaaccggcgccgctggatgcacaccttccctgtcggtccctctggg
gaagccatccagatccaccatcagaccaggcagaacatggctgaactgcagggcagtgag
cagcgggaccccacacacacttctgctgagctgctggaactggcctatcatgaagcaatg
ggccggcgaacaggactccctcagactgcagacagtgtgggaactgatgattattctggt
agtccagccagcagcattagcacaggtacacccgtcaaccgcggctctatcgatgagtgc
tccagcatttcggatccaatcctgcagctctctgcccctcctacagtgccttcgttctgc
tgtacagttggcgtggactggaagtctctgaccacgccggcttgtctccctctcaccact
gactatttccctgaacggcagtcgctgcagaacgactacaccgagggctgttatgaccta
ctgccacacactgacctggagcggcgtgatgacgaggcccctgtgattagtgctccacgt
gtgtttgaggagttcatctgccagaggctgatgcagggctttcagatcatcgtccagccc
aacagcaggaaagctccgcctacagtggctccgcccctcagcagcagccctctctactcc
aggggtctggtgtctcggaggaaagccgaggaagaggagagtcagtattggctcagtatg
ggacgaactttccacaaagtctgtctaaaagacaaaatcatcactgttacacgctacctt
cccaagtatccatatgagtccatccagattcagtacggttacagtctttgcccccctcat
gctgatggccattttgtgccctgctgggtggagttcagtcacgagagagtggaggagtac
aaatggaactacttggaccagtacatctgctcggccggctctgaggacttcagccttata
gattctctaaagttctggcgtacccgcttcctgttgctcccagcaggcggagccaggcgt
gtggcagacggtgagggccactgggatgtgtatggggagggtccaggggcagcggcaggg
tctggagactggactctgcttgatggcttcatacgctttttagaggggctgaacagaatc
cggagacgacatcgatctgatcgtattatccgaaaaggaggagccataaagggtcttcag
gtgacgtcaccactctctccttacaatgcagagcctctagcacctccgatgggtaagaaa
ggtgtgtcggctctcactacactgctcgagctggatcagactcacaagactctggaggag
cagcaggccgcctctcagtgtgcggtggtggttaaagcaaacacgtcattcagtgatgct
actgctgtcattaccatggcaactacttatgttgacagccctagaaaggatgctgcattc
atgttggattttattcgtagccctcgctcctcctacctgtctcactctcagatgccgact
gagcttcctgcatccaatcctgctgattctggctcagcagagaaaggagggaacctacca
aacgacaggatggtggtgggcggtgctacggaccctgcttctgggcctgaaccgggggct
cagcaggacagcctgtcctcctcctccaccatgctggagatcctggaggccatcaaacac
ccaaatacaggtgttcagttgttgccagaacagaagggtttgcctcctaactgctttatc
agtgcagaggtggttcaatggctgatgaacactgttgagaacgtggccacgcagggcatc
gctgtggagatcatgcagaaaatgttagacgatggtctgatcgttcacgcgtccggcgag
gccatgcgcactttcgtctacggcttctacttttacagaattgtggataaggacaacgag
aaggctccatgcagcagttctagctctgcagcggcgctcgacgacttggcgctgttccaa
aggaaatggttcgaggtggcgttggcaatggaggagactcgcccctgtgatctgcccacc
ttcctgctgccgtggctgcctagccgacccgcctcgtacgccagccgtcacagctctttc
agccgcagcttcgggggacgcagccaagccgctgccctgctagctgctacagtacctgag
cagaagacagtcactctggacgtagacgtaaacaaccgcagcgatcgtaccgaatggtgt
agttgctattaccatggtaacttctcacccaacacagctttcgagatcaagctgcactgg
atggccgtgacggcagcggttctcttcgagatggttcaaggctggcacaggaaggcagcg
tcatgcggttttctgctggtgccgtcactggaggtgccgttcgctttgccctcatatctg
tacggagaccctctgcgtgctcagctctttatccccctcaacatccagtgcctgcttaaa
gacgccagcgaaaacctgttcgacggttttgaaccagagacgtactgggaccggatgcag
ctcttccaggaagccattctttacaggttcggcttcgttcaggataaattttctgcctct
gccttcagcttccctgcggaaaacaagccgcagtacatccacgtcacaggcacggtgttc
atgcagttgccgtactcgaagaggaagtacccgagcggtcagcagcgccgccgtcgtaac
tccgcctcctcggccagtcagagtctgtttggccccgaagagcacgtcggctaccactgg
gcctacaacaccatgctgaccaaagcgtggcgcaccggcgtcctgggagacgaaaagctg
gcagagcgtctcctccgagacttcaccgacttctgctccaacaaggacaaccgtctcatg
agcttctgggagaactgtgtagagaaaatgaattccagcgccccatga
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integrated database retrieval system
