Tachysurus fulvidraco (yellow catfish): 113661837
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Entry
113661837 CDS
T08119
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113661837 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113661837 (taf4a)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113661837 (taf4a)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113661837 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
113661837 (taf4a)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113661837 (taf4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
113661837
NCBI-ProteinID:
XP_047660960
LinkDB
All DBs
Position
2:complement(14587288..14599668)
Genome browser
AA seq
880 aa
AA seq
DB search
MRIKTRIKTQTSALHGERDLVCLNAMVTTLPGHEVKLGTSTVQTLDGGDAMDPRSESTTV
SSGSSTDPAASATVNVTVPVVNNGPGITKGLVTAPSTSNTVIQASFVSAPSVNVSSAAGG
TAAATIRPSMQPATLTINGNNSNVLTAASSVATVTGTTPLTNAPPPVNVNASPAVPIKAE
SPQTVIQSAAHSGSPQVSPGAAKGAGLMHATTAVRGGAPVTGGGAPVAAAAAGGVRTIAP
QHLLAPRLSQSTPGQPSIHNIQLPPGMVLVRSEAGQLLMIPQQVLAHMQATRAATPASTT
PGQVTSTQTVGAPIMARPVTTTIIKQGSPTTSSTTAPTLQRPPMQPPSVGSVLAVQPGTA
QRMVTPTTGTSVTSATQETMENVKKCKNFLSTLIKLATSAKQSSQTAANVKDLVKNLLEG
TIEAEDFTSRLYKELNSSPQPYLVPFLKRSLPALRKLTPDSLAFIQQSQGLQPTKPAASV
VLTNTTTAIAATVATATPAASVPSATTSISAGTAASVAAPTVSRTLTQPALAATSQSASL
VLQSPQQSAIVKSPQVTLATPMVTLRGQPHSRIVVAQPQVQVKQLNTVAVKPGMVSGAKV
SPSSVALNAAQKNKLKDASGGTFKDDDDINDVASMAGVNLSEESARILATNSELVGAVTR
SCKDEAFLFSAALQRRILDIGKRFGVTDLGSEVVNLVSHATQQRLQNLLEKVTVIAQQKN
MNYKEDARFEQVTDVRAQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLK
QKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKLDSPALGTDAEGSGSSASSSVGLSGG
ASRQFTRQRITRVNLRDLLFCLENERESSRSQLLYRALLK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattaaaacacggattaaaacacagacttcagcgctgcacggtgaacgcgatctg
gtgtgtctgaatgctatggtaactactttgcctggccacgaagtcaagctcgggacgtca
acagtacaaactttggacggaggcgatgcgatggatccgcgttcagaaagcaccacagtg
tcgagcggctcgtcgaccgatccagccgcttctgctaccgttaacgttaccgtgccggtg
gtcaacaacgggcccggtataacgaaaggacttgtgactgcaccttctacttcaaacacg
gtgatccaggcgtctttcgtgagcgcgccgagcgtgaacgtgtcgagcgcagcaggcgga
accgccgccgccaccatcaggccatctatgcaacccgcgactttaaccattaacgggaat
aacagtaacgtgctgacagctgcgtccagtgtagctacggtcacgggaaccacgccgctc
acaaacgccccacctcctgtcaacgtgaacgcgagtccggcggtgccaatcaaagccgag
tcaccgcagaccgtgatccaaagcgcggcccatagcggatctccacaggtttcccccggg
gcagccaaaggcgctgggctgatgcatgcgacgacggcggtgagaggcggagccccggtg
acaggaggcggggcgccggtggccgcagccgcggcgggcggcgtgaggaccatcgcgccg
caacatttgctcgcgccccgcctctcacagagcactccgggacagccgagcatccacaac
atccaacttcctccaggtatggtgctggtgagaagtgaagctggccagttgctcatgatc
ccccagcaggtgttggctcacatgcaggccacacgcgctgccactcctgccagcaccacg
cccgggcaggtcacctccacacagactgttggcgctcccatcatggccagaccagtgact
accaccatcatcaaacagggctcaccaacaaccagtagcaccactgcacccaccctgcaa
aggccacccatgcagccgccatcggtgggctctgtgttggcagtgcaaccgggcaccgcc
cagaggatggtaactcccactacggggaccagcgtcacctcggcaacgcaggagacgatg
gaaaatgtgaagaagtgtaagaacttcttatccacgctgatcaagctcgccaccagcgcg
aagcagtcctcgcaaacggccgctaacgtgaaagacctggttaaaaacttgctggaaggg
acgattgaagccgaggacttcaccagcaggttatacaaggagcttaactcttcaccccag
ccttatctcgtgcctttcctaaagaggagtcttcctgcactgagaaaactcacgccggac
tccctggccttcattcagcagagccaaggcctgcagcccaccaaacctgcagccagtgtg
gtgctgaccaacactacgacggctattgctgccactgttgctaccgcaactcctgctgca
tctgtaccttctgcgaccacttcaatttccgcaggcaccgcagcatccgtcgcagccccc
acggtctctcgcacgctcacccagcccgctctcgccgcaaccagccagagtgcctcactg
gtgttgcagtctccgcagcagagtgcgatcgtcaagtccccccaggttactctggcaact
ccaatggtaactctcaggggtcagccgcatagccgcattgtagttgcgcaacctcaagtg
caggtcaagcagcttaacacagtggctgtaaagcccgggatggtgagtggagcgaaggtc
tctcccagctctgtggctctgaacgcagctcagaagaataagctgaaggatgcctccggg
gggactttcaaggatgacgacgatatcaacgacgtagcctccatggccggcgtgaatctg
tcggaggagagtgcacgaatcctggccaccaactctgagttagtgggggccgtgactcgc
tcgtgcaaggatgaagcctttcttttctcagccgcacttcagcgcaggatactggacatc
ggtaaacggtttggagtgacggatctgggctctgaggtggtgaacctggtgtctcacgct
actcagcagagactccagaaccttctagaaaaggtcacggtcattgcacagcaaaagaac
atgaactataaggaggatgcccggtttgagcaggtgactgatgttcgcgcacagttgaag
ttcttcgagcagctggaccagctggagaaacagaagaaggaagaacaagagagggaaatt
ctaatgaaggcagccaagtctcggtctcggcaggaggacccagagcagttgcggttgaag
cagaaggccaaagagatgcagcagcaggagcttgctcagataagacagagagatgccaac
ttgacagcactggctgctattgggcccaggaaaaagaggaaacttgactcacctgctctt
ggcactgatgcagagggttccgggtcttcagcgagctcgtctgtgggtttgagtggtggc
gcatcacggcagttcacccgtcaacgcatcacgcgtgtaaacctcagggatctgctcttc
tgcctagagaacgagagagaaagcagccgctcacagctgctctaccgggctctgctcaaa
tag
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