Tachysurus fulvidraco (yellow catfish): 113661880
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Entry
113661880 CDS
T08119
Symbol
fgd5a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113661880 (fgd5a)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
113661880 (fgd5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
RHG20_PH
FYVE_2
IQ_SEC7_PH
PH_20
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
113661880
NCBI-ProteinID:
XP_027032183
LinkDB
All DBs
Position
2:complement(15697917..15736040)
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AA seq
1546 aa
AA seq
DB search
MNTDDQKQLQTPQSKIQSHLAITVCSSFMSRPCPSSRGPKPPVAPKPNLSTQQEGEHSQC
IVSNGDVASELELAQDSESESTQDEAEPPGETHKEFFSEQLIKNHNSNDGIDDKETDEQM
GVEVRDEINAVEEESHFDVVDAGSLNEVKDVIVTSVSVAIDHIKETDDIKPQQGTGDPDD
TADDPAEKETAMEYQTGDESEANNSTLSPYEEIEECTSNQGSTYAEIDHAEDLMSDTADN
TEEPYFNEREFLCGTPIDTTSTKLCEEGTNSNAEGSTEEASNAMAGFTSQTMNGSESSLC
EEYPYDVIGPLDDNSVWQPERATKDESGRFRFSEGEEDGFEPYSVIEVVPADLLSTSDPE
LECTDEEYSEEKAKHPETKMESTQEPCYISTDDVAEVEEQSQVEGNLASSEEPCERELTR
KSNGDVVDEYADIAEECQDEDDQQLECVSSEDYVEIGDEDEPVDMTRKTKGKSTKARSAI
RRQCGVSKRNSCQPRLRLCDITVPPGLDVGRTPELTNRLVFAHTTEAFEEDIEDLDCHIV
PFFEDSESDGDEHIYEEAGFDSEGENFITLDRKTIVTRSRSLSGKVPGYVPETVPEETGN
ESQNHDYYTVSLDQNGDLLKVSNNSESNRIIPSINSRRFLFYPRSYSVEGRDMTLSAYLD
GSHSPRVDNRVKRTDDTLSLPCVITSSGSFSQRSHQSSSGVSTPTSLVDIPPPFELAYIT
KRPITKSSPSLLIQHESNDKPNKKKTSFKRFLALKFRRKTDNKSLADGSVRSSRSSSESS
HHGPVRVIELDRRSNGSSPQLQSHIIKPQRNSDFPATFLVYKDGQKKKGVPKTYGSRGIS
RVESFEERSRPPFMPLPLTKPRSISFPSADTSDYENIPAMSSDYENIPIPQGRPTRAVTI
TEFFEEQNRTATANENDGYVDMNSFAGIENKTNTQEQETESAYTEPFPVCPAPASHFTEE
DHGHTSEEEEGCPDQSYDRQIDGRSRAYYVAKELLDSEREHVKTLKLLQEDFRSAAEEAV
GQDGGSVVEEGTLEEILNTLPQAYQLHTHILTQLDARIQQWEESPTMVDVFLGHREEFGI
FVTYIGGYDRSMALLEETCRQSKGFADVVKHFEQQNSEGVQIPVKHQLLQVIVRVLQYRM
LLTDYLNNLSPDSKEYEDTQAALVIVSDVADQANDNLKEGENLLRLVHIEYSVKGKRSFL
QPGRVFVKEGTLMKVSHKSRQPRHLFLMNDIILYTYPQQDGKYRMKNTLPLSGMKVSKPV
IDNVLNTLRIEVNDVTITLSASSVGEREDWFHTLSRAIADHAAGLNTFSSSSEAREKLWM
SLGEAAPVLVPISHAMMCMNCASDFSLTLRRHQCNACGKVVCRSCSRNRYPLKYLKDRMA
KVCDRCYTELKKRGGNVPIPCGSASPHTHRASRPLSAVFQSLQPPSLWKSRKSSTSPLAQ
VSVGAEGSTISGSLQRRKKSKRKWKRLWFLLKDKVLYTFTAREDKVASETLPLQGFTVKL
SDQTEGEDTGGVFQLYHKKTLYYTFRADDHHTARRWVNAMEEATVL
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagatgatcagaagcaacttcaaacacctcaatcaaagatccaaagtcatcta
gccatcaccgtatgttccagcttcatgtcaagaccttgcccgtcctcccgaggtcctaaa
cctccagttgctccaaagccaaatctctccactcagcaggaaggtgaacacagccagtgt
attgttagcaatggagatgttgcatcagaactggaattggcgcaggacagtgaatcagaa
tccacacaggatgaagctgagccaccaggagaaacccacaaagagtttttttctgaacag
ttaattaagaaccacaacagcaatgatgggattgatgataaagaaacagacgaacagatg
ggagtagaagtaagagatgaaataaatgcagtagaagaagagagccactttgatgtagtt
gatgcaggttccttgaatgaagtcaaagatgttattgtaactagtgtatcagttgcaata
gaccacatcaaagaaacagatgatataaaaccacaacaaggcacaggtgatcctgatgat
acggcagatgatcctgctgagaaagagactgccatggagtatcaaacaggagatgaatca
gaggctaacaacagcacactgagcccttatgaagaaattgaggaatgcacctcaaatcag
gggagtacatatgcagagatagatcatgccgaggacctgatgtcagacactgctgataat
acagaggagccatatttcaatgagagagagttcctttgtggaaccccaattgatactact
tctactaaattatgtgaagagggcacaaattcaaatgcagagggcagtactgaggaggcg
tcaaatgcaatggctggatttacttcccagactatgaatggcagtgagtcctccctgtgt
gaggagtacccatatgatgtaattggacctctggatgacaacagtgtgtggcagccagag
cgtgccaccaaagacgaatcaggacgtttcagattctcagaaggagaagaggatggattt
gagccatattcagtcatagaagtggttcctgcggatctcctgagcacctctgaccctgaa
ctggagtgtacagatgaggaatatagtgaagagaaagcaaagcaccctgagacaaagatg
gaatccactcaagagccatgttatatctcaactgatgatgtagcagaagtagaagaacag
tctcaggtggagggcaatttggcttcatctgaggaaccctgtgaacgggagttgacgaga
aaatcaaacggggacgtagtggatgagtatgccgacattgccgaagagtgccaggatgaa
gatgatcagcagctggagtgtgtgtcatctgaggattatgtagagataggcgatgaagat
gagcccgtggacatgacacgtaaaactaaagggaagagcacaaaggcgcgctcagctatt
cgcagacaatgtggcgtaagcaagagaaacagctgccaaccacgtcttagactttgtgat
attacagtgccccctggtctggatgtgggcaggactcctgagctaacaaaccgtttagtg
tttgcccacaccaccgaggcattcgaggaggacatagaagacctcgactgccacatagtg
ccttttttcgaggactcagaatcagatggtgatgagcacatttatgaggaagcaggcttt
gactcggaaggagaaaattttatcactctggacagaaagactattgtgactcgttcacgg
tcgctctcagggaaagtacctggatatgtccctgagactgttcctgaggagacaggcaat
gaatctcagaatcatgactactacactgtgtccttggaccaaaatggggatctcttaaaa
gtctcgaataattcagagtctaatcgcataattccttcaataaactctagacgttttctg
ttctacccacgatcgtattctgtggagggcagagacatgactttgtctgcctatttggat
ggcagccattcacccagagtggacaacagagtgaaacggacagatgacactctctcctta
ccttgtgtcatcacctcttctgggagtttctctcaaagaagccatcagtcctctagtgga
gtgtctacacctacatctcttgttgacattccaccaccctttgagctggcttacatcacc
aaaaggcctatcactaaaagttccccatctctgcttattcaacacgagtctaatgacaaa
ccaaataagaagaagacatcatttaagcgtttcctggctttgaagtttaggaggaaaact
gacaataagtcactcgctgatggcagcgtacgctcttccagatcatcatctgaatcaagc
caccatgggcctgttcgagtaatagagctggatcgaaggagtaatggcagttcccctcag
cttcagtctcacatcataaaaccacaacgcaactcagactttcctgctacctttttggtt
tacaaagacggccagaagaagaaaggtgtacccaagacttatggcagcaggggcatctcc
agagtggaatcttttgaggagcgctctcgtcctccctttatgccactcccactcaccaaa
cctcgatccatatcctttccaagtgctgatacttctgactacgaaaacattccagccatg
agctcagactatgaaaatattccgattcctcaaggtaggcccactcgggccgtcaccatc
acagagttctttgaggagcaaaatcggacagccactgcgaatgagaacgatggttatgtc
gacatgaacagctttgcaggaatagagaacaaaactaacacacaagagcaagagacagag
agtgcatacacagaacctttcccagtgtgtcctgccccagcatcgcatttcacagaggaa
gaccatggacacacgtctgaggaggaggaaggctgtcctgatcaaagctatgacagacag
attgatggcagatccagagcatactatgtagccaaagagctgctggattcggagagagaa
catgtaaagacactgaaactacttcaagaggatttcagatcagcggcggaggaggcagta
ggacaagacggcgggtccgtggtggaggaggggacgttggaagagattctcaacaccctg
cctcaggcctaccagctccacacacacatccttacacaactggatgcacgcatacagcag
tgggaggagagcccgacgatggtggacgtctttttggggcaccgtgaggagtttgggatt
ttcgtgacctacattggtggttatgaccgcagcatggctctgctggaggagacctgtaga
cagagcaaaggctttgctgatgtcgtcaaacactttgagcagcagaattcagaaggtgtg
cagattcctgtgaaacaccagctgctgcaggtcatcgtgcgtgtactgcagtaccgcatg
cttctcacagattacttaaacaacctctcccctgactctaaagaatatgaagacacacaa
gctgcattggtgattgtgtcagacgttgcagaccaggccaacgacaatttaaaagaaggg
gagaacttgcttcgtctggtccacatcgagtacagcgtgaaggggaagaggagttttctg
cagccgggaagagtgtttgtaaaagagggcacactcatgaaggtctcccataagagccga
cagcctcgacatctgttcttgatgaatgacataatcctgtacacctaccctcagcaggat
ggcaaatacaggatgaagaatacacttcctctcagtgggatgaaggttagtaaaccagtc
atcgataacgtcctcaacacactaaggattgaagttaatgatgtcaccatcaccctttca
gccagctctgtaggagagagagaggactggttccacactctgagtcgagctatagccgac
cacgctgcaggcctcaatacgttcagctcttccagcgaggcgagagagaagctgtggatg
tcccttggagaagcggctcctgtcctcgtgcccatctctcacgccatgatgtgtatgaac
tgtgcgtcagatttcagtctcactctgcgcaggcaccagtgcaacgcatgtggcaaggtg
gtgtgtcgctcctgctccaggaacagatacccgctgaagtatctgaaggatcgtatggct
aaagtctgcgaccgctgctacactgagctcaagaaacgaggtgggaacgttccgattcca
tgtggcagtgctagtccacacacacatcgtgccagtagacctctgtccgctgtgtttcag
agcctacagcctcccagtctgtggaagagcaggaagagcagcacatcacctcttgctcag
gtgtcggtgggtgctgaaggctccactataagtggtagtttgcagaggcggaagaagagc
aagcggaaatggaagaggctgtggttccttctcaaagataaggtgctctacaccttcaca
gctcgagaggacaaggtggcaagtgagactttgcctcttcagggtttcacagtgaagctg
tctgatcaaactgagggtgaggacacgggtggagtctttcagctttaccacaaaaaaaca
ctgtactacacattcagagcagatgatcatcacaccgcacgaagatgggtgaatgccatg
gaggaagccacagtattatag
DBGET
integrated database retrieval system
