Tachysurus fulvidraco (yellow catfish): 113662145
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Entry
113662145 CDS
T08119
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04144
Endocytosis
tfd04145
Phagosome
tfd04148
Efferocytosis
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113662145
04145 Phagosome
113662145
04137 Mitophagy - animal
113662145
04148 Efferocytosis
113662145
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113662145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113662145
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113662145
04031 GTP-binding proteins [BR:
tfd04031
]
113662145
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
113662145
Endosome - Lysosome transport
113662145
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113662145
Exosomal proteins of other body fluids (saliva and urine)
113662145
Exosomal proteins of colorectal cancer cells
113662145
Exosomal proteins of bladder cancer cells
113662145
GTP-binding proteins [BR:
tfd04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
113662145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
113662145
NCBI-ProteinID:
XP_027032631
LinkDB
All DBs
Position
8:20367623..20372787
Genome browser
AA seq
213 aa
AA seq
DB search
MAGRPNGPATGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCL
DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIIVYDITNIDTFARAKNWVNELQKQASP
NIVIALSGNKADLTNKRAVDFQEAQAYADDNGLLFMETSAKTAMNVNEIFMAIAKKLPKN
EPQAGGGGASGRGRTGVDLQDSAHQSSTGKCCN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgacccaacgggccggccacaggaaataagatatgccagttcaagctggtt
cttctgggcgagtcagctgtggggaagtccagtctggttctgcgctttgtcaagggccag
ttccacgagtaccaggaaagcaccatcggagcggccttcctcacacagactgtgtgcctg
gatgacacaacagtaaagtttgagatttgggacacagccggacaggagcgctaccacagc
ctggccccgatgtactacagaggagctcaggcagccatcatcgtctacgacatcactaat
attgacacatttgcacgagcgaaaaattgggtgaacgagctgcagaaacaggcaagtccc
aacattgtcatcgccctgtctggaaataaagctgacctcactaacaagagagccgtcgat
ttccaggaagcgcaggcgtacgctgacgataatggcctgctgttcatggagacgtcagcc
aaaacagcaatgaacgtcaacgagatatttatggccattgcgaagaagctgccgaagaac
gagcctcaagctgggggaggtggagccagtgggcggggtcgaacaggtgtggacctccaa
gactccgcccaccagagctccacaggcaaatgctgcaactga
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integrated database retrieval system