Tachysurus fulvidraco (yellow catfish): 113662235
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Entry
113662235 CDS
T08119
Symbol
cldn1
Name
(RefSeq) claudin-1 isoform X1
KO
K06087
claudin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03272
Virion - Hepatitis viruses
tfd04382
Cornified envelope formation
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
113662235 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113662235 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113662235 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113662235 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tfd03037
]
113662235 (cldn1)
04147 Exosome [BR:
tfd04147
]
113662235 (cldn1)
Cilium and associated proteins [BR:
tfd03037
]
Other cilia and associated proteins
Stereociliary proteins
113662235 (cldn1)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
113662235 (cldn1)
Exosomal proteins of colorectal cancer cells
113662235 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
SfLAP
DUF7994
Motif
Other DBs
NCBI-GeneID:
113662235
NCBI-ProteinID:
XP_027032769
LinkDB
All DBs
Position
1:44303198..44309697
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AA seq
221 aa
AA seq
DB search
MASGGMQLLGYILAFLGFVGLIISTTMTEWKMSSYAGDNIITAQAVYEGLWQSCVYQSTG
QIQCKVYDSLLQLPLEVQAARGFMVSGILLCGIAVLVAAVGMKCTKCMEDNMEVKSKVAM
AGGVVFVVAGVEIWIRFFSERDKTGKRVCAFIATIWYGDNIRRQFFNPFTPTNARYEFGK
ALYIGWGSCSLTVIGGSLLCCNCGTKSSGGPAKPYPGPRPK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggagggatgcagctcctgggctatatactggcatttttaggctttgtgggt
ttgatcatctccaccaccatgacggagtggaagatgtcctcatatgcaggagacaatatt
atcacagcgcaggccgtgtatgagggactgtggcagtcctgcgtgtaccagagcactggc
cagatccagtgtaaagtctacgactcgctcctgcagctacccttggaggtccaggcggct
cgagggttcatggtgtcagggatcctgctgtgtggcatcgctgtcctggtggccgcagtg
ggtatgaagtgcaccaagtgcatggaggacaacatggaggtcaaaagcaaagtggccatg
gctggaggagtcgtgtttgtcgtggcaggtgtggagatttggattagattcttctcagaa
agagataaaacaggaaaacgtgtgtgtgctttcattgctactatctggtatggagataac
atcagacggcagttcttcaaccccttcactccgactaacgcaaggtacgaatttggtaaa
gctctatatattggatggggatcgtgctctctcactgtgattggcggcagcttgctgtgc
tgtaactgtggcacgaagagttcaggaggtccagcaaaaccttacccagggcctcgtccg
aaatag
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