Tachysurus fulvidraco (yellow catfish): 113662389
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Entry
113662389 CDS
T08119
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113662389 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113662389 (sh3rf1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113662389 (sh3rf1)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113662389 (sh3rf1)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113662389 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
113662389
NCBI-ProteinID:
XP_027032943
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All DBs
Position
9:23410744..23449176
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AA seq
869 aa
AA seq
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MDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPECRTLVESGV
DELPSNILLVRLLDGIKQRPWRAGTACTNGLAGGGVREHASTGPQPQRAQTKSTTVRGVP
QLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEVGGVHGFFPASFVQVIKPL
PQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDQNWAEGMLGDKIGIFPISYV
EFNSAARQLIELDKAPDDTAEGTSSSSSSSSSSTNSSSGPQANGTQKVSGEKKNSKKRHS
FTSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELSGGLSSSAPSQVHICTT
GLIVTPPPSSPVTTATVFTFPPETSYASIPVDTLPPPPPPPPQSTSVGAAASLAAGQRPS
PTASDQSGRQRPTVYVAMFPYTPRKDDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGV
FPGNYMSPVSRTVASSSQPKVPLAMSSQAGRGVTVVSSSSSPIGVALAGIDPNKPLPVCT
GHTPSSPIPAAVVTAAHMPPGQHPKVLMHVTSQMTVNQARNAVRTAVCHNQDRPTAAVTP
IQSQNAMAFLTHLAVCPQPAPGSSSASNPASSRMGVAMGCAAASLTPPNISAASLEVDGM
RPTAMVSLPVAPGNTKPLGATAANQAPACKLDKREKKGLLKLLSNKKKLRPSPPSSPTLE
AEQAAAADMPQGAMAPEQPLSNPTAAASGNHCRTGPCPMESDSPAPSSSSSSNSETARRT
GCQENSAPIAPPPRQPCSSLLSVQHDGRPIVCERYRVVVSYPPQSEAELELKEGDIVFVH
KKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcggcactgctggatctgctcgagtgcccggtgtgcctagaacggctggac
gccaccgctaaggtcctgccatgccagcatacgttctgccgccgctgcctgcttggcatt
gtgggatcgcgtggcgagctgcggtgccctgaatgccgcacgcttgtggagagcggtgtg
gacgagttgcccagcaacatcctcctcgtgagactgcttgatggcatcaagcaaagaccc
tggcgagccggaacggcttgtaccaacggcttggctggcgggggggttcgagagcatgcc
agcacaggaccacagccccaaagagctcagaccaaaagcacaacggtcaggggagtaccc
caactcccctgcgccaaggccttgtacaactacgatggcaaggaacctggcgacctcaag
ttcagcaagggtgacatcatcatccttcgccggcaggttgacgagaactggtaccacggc
gaagtgggcggagtgcatggcttcttcccggccagcttcgtgcaggtgatcaagccgctt
ccacagccgccgccccagtgtaaagccctgtatgactttgagctaaaggacaaagaggcg
gacaaggactgccttcccttctcaaaggacgacattctgacagtaattcgacgtgtggac
cagaactgggctgagggaatgctgggagataagattggcatcttccccatatcttatgta
gagtttaactcggccgcacggcagctgatcgagctcgacaaggcaccagacgacacggcc
gaaggcacttcctcctcctcatcctcttcctcctcctccaccaactcgtcctctggacct
caagccaacggcacccaaaaagtgtcaggggagaaaaagaacagcaagaagcgccactcg
ttcacctcgctgaccatgtcccataagccgtgcctggcaccaccaccgcagcgccactcc
atggagatcagcggacccgttctcatcagctcatcgaacccgacagcggctgcacgcatc
ggagagctcagcggggggttgtcctccagcgccccctcgcaggttcacatttgcacaaca
ggcctcattgtcacaccaccaccaagcagtcctgtaacgacggccacggtcttcactttt
cctccagagaccagctacgcctccatccctgtggacactttgccgcctcctccccctcct
cctccacaatccacctctgtgggtgcggcggcgtcgctggccgcggggcagaggccgtcc
cccactgcaagcgaccagagtggacgccagagaccgactgtgtatgttgcgatgttccca
tacacaccccgtaaggatgacgagctggagctaagaaagggcgagatgttcctggtgctg
gagcgctgtcaggacggctggtttaaaggaacgtccatgcacaccggcaagatcggagtt
ttccccggcaactacatgagtcctgttagcagaacggtcgcaagcagcagtcagcccaaa
gtacctctagcgatgtcctcgcaggccggacgtggcgtcaccgttgtcagctcctcctcc
tctcccattggagtggctctggctggcattgaccccaacaagccccttcctgtttgcaca
ggccacaccccttcaagccccatccccgcagctgtagtcacggcggcccatatgccacct
ggtcagcatccaaaagtgctcatgcatgtgacgtcacagatgacggtgaaccaggcacgc
aatgctgtgaggaccgccgtgtgccacaatcaggaccgccctactgcagccgtaacgcca
atccagtcccagaacgccatggctttcctgactcaccttgctgtgtgtccgcagccagca
cctggcagtagctccgcctccaaccctgcgtcaagcagaatgggagtggctatgggctgc
gctgctgcctcacttaccccacccaacatcagcgctgcttctctggaggtcgatggcatg
agacccaccgccatggtgtcgctcccggtcgctcccggcaacaccaagcctctcggtgcc
acagcagcaaatcaggctcctgcttgtaaactagacaagagggagaagaaaggcttgttg
aagctgttgtccaataaaaagaagctccgcccatctccaccctcatctccaactctggag
gcagagcaagccgctgccgcggacatgcctcaaggagccatggcacctgaacagcccctg
tccaatccaacagcagcagccagtggaaaccattgcaggactggaccctgtcccatggaa
tcagactcacctgcaccttcatcatcgtcatcatcaaatagtgagactgcacgcaggact
ggctgtcaggaaaactctgctcctattgcaccgccaccacggcaaccgtgctcctctctc
ctgtctgtgcagcacgatggacggccaatagtgtgcgagaggtaccgtgtggtggtgtcg
taccctccacagagcgaggctgagctggagctgaaggagggcgacatcgtgttcgtgcac
aagaagcgtgaggacggctggttcaaaggcacgctccagaggaacggcaggacgggcctc
tttcccggcagcttcgtcgacagcatctga
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